EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000011996 (Gene tree)
Gene ID: 103388828
Gene Symbol: rab11al
Alias: fc54g10|wu:fc54g10|zgc:63565
Full Name: ras-related protein Rab-11A-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 27453 bases
Position: chr13:17728073-17755525
Accession: 103388828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000018722	MMR_HSR1	PF01926.23	3e-07	1	1
ENSCSEP00000018727	MMR_HSR1	PF01926.23	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000018961	-	1459	XM_008324019	ENSCSEP00000018727	215 (aa)	XP_008322241	UPI00049860A1
ENSCSET00000018956	-	1319	-	ENSCSEP00000018722	195 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000011996's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000011996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000011996	rab11al	93	32.178	ENSCSEG00000016556	rab6bb	93	32.178
ENSCSEG00000011996	rab11al	81	35.032	ENSCSEG00000005479	rabl2	70	34.783
ENSCSEG00000011996	rab11al	96	45.498	ENSCSEG00000014416	zgc:171927	99	45.498
ENSCSEG00000011996	rab11al	94	69.399	ENSCSEG00000011982	rab25b	95	62.857
ENSCSEG00000011996	rab11al	81	40.491	ENSCSEG00000016284	rab33a	58	40.491
ENSCSEG00000011996	rab11al	84	30.909	ENSCSEG00000016611	rheb	87	33.540
ENSCSEG00000011996	rab11al	75	34.694	ENSCSEG00000005737	kras	85	35.802
ENSCSEG00000011996	rab11al	65	39.062	ENSCSEG00000018133	rab34b	51	39.062
ENSCSEG00000011996	rab11al	94	42.584	ENSCSEG00000017861	-	97	42.584
ENSCSEG00000011996	rab11al	86	42.262	ENSCSEG00000016933	rab12	69	42.262
ENSCSEG00000011996	rab11al	73	31.646	ENSCSEG00000018987	si:ch73-116o1.2	88	31.694
ENSCSEG00000011996	rab11al	92	37.895	ENSCSEG00000006243	zgc:101559	81	37.895
ENSCSEG00000011996	rab11al	80	40.994	ENSCSEG00000010116	rab9a	75	40.994
ENSCSEG00000011996	rab11al	95	49.020	ENSCSEG00000020977	-	96	49.020
ENSCSEG00000011996	rab11al	60	30.833	ENSCSEG00000010194	-	59	30.833
ENSCSEG00000011996	rab11al	95	38.278	ENSCSEG00000003768	rab15	89	38.278
ENSCSEG00000011996	rab11al	81	40.491	ENSCSEG00000005357	-	78	40.491
ENSCSEG00000011996	rab11al	99	83.028	ENSCSEG00000007239	-	99	83.028
ENSCSEG00000011996	rab11al	81	43.312	ENSCSEG00000019797	rab22a	89	41.040
ENSCSEG00000011996	rab11al	75	35.374	ENSCSEG00000007927	hrasb	85	36.420
ENSCSEG00000011996	rab11al	74	39.333	ENSCSEG00000014479	-	62	39.333
ENSCSEG00000011996	rab11al	93	40.196	ENSCSEG00000011816	rab18a	95	40.196
ENSCSEG00000011996	rab11al	85	44.578	ENSCSEG00000016803	rab18b	82	45.679
ENSCSEG00000011996	rab11al	94	42.584	ENSCSEG00000019722	RAB39B	97	42.584
ENSCSEG00000011996	rab11al	99	82.407	ENSCSEG00000007121	rab11ba	84	82.407
ENSCSEG00000011996	rab11al	98	39.189	ENSCSEG00000010402	-	98	39.189
ENSCSEG00000011996	rab11al	93	30.126	ENSCSEG00000011160	rab20	97	30.126
ENSCSEG00000011996	rab11al	98	46.083	ENSCSEG00000016498	rab14	100	46.083
ENSCSEG00000011996	rab11al	91	32.240	ENSCSEG00000015770	si:cabz01085950.1	87	32.240
ENSCSEG00000011996	rab11al	78	32.544	ENSCSEG00000010565	rab23	90	32.979
ENSCSEG00000011996	rab11al	99	85.981	ENSCSEG00000007383	rab11a	99	85.981
ENSCSEG00000011996	rab11al	93	30.693	ENSCSEG00000003122	rab6ba	93	30.693
ENSCSEG00000011996	rab11al	81	40.491	ENSCSEG00000002970	RAB7A	73	40.491
ENSCSEG00000011996	rab11al	95	39.623	ENSCSEG00000010582	rab42a	97	39.623
ENSCSEG00000011996	rab11al	81	36.471	ENSCSEG00000020348	rab33ba	76	34.973
ENSCSEG00000011996	rab11al	79	34.194	ENSCSEG00000011820	rras	82	33.333
ENSCSEG00000011996	rab11al	88	35.088	ENSCSEG00000004941	rab41	81	35.673
ENSCSEG00000011996	rab11al	93	45.055	ENSCSEG00000002358	rab13	96	42.289
ENSCSEG00000011996	rab11al	73	32.026	ENSCSEG00000000717	rasl11a	65	31.707
ENSCSEG00000011996	rab11al	79	30.864	ENSCSEG00000020208	rasl11b	66	30.303
ENSCSEG00000011996	rab11al	58	48.246	ENSCSEG00000009988	si:dkey-16l2.16	87	48.246
ENSCSEG00000011996	rab11al	96	46.117	ENSCSEG00000018732	rab1ba	99	46.117
ENSCSEG00000011996	rab11al	99	82.488	ENSCSEG00000012149	rab11bb	99	82.488
ENSCSEG00000011996	rab11al	95	33.796	ENSCSEG00000019183	si:dkey-34d22.5	97	33.796
ENSCSEG00000011996	rab11al	96	43.128	ENSCSEG00000013400	rab35b	99	43.128
ENSCSEG00000011996	rab11al	80	41.615	ENSCSEG00000014467	rab9b	75	40.120
ENSCSEG00000011996	rab11al	87	41.935	ENSCSEG00000007292	rab30	90	41.935
ENSCSEG00000011996	rab11al	82	42.138	ENSCSEG00000000205	RAB15	77	42.138
ENSCSEG00000011996	rab11al	80	32.386	ENSCSEG00000012961	rab34a	68	32.386
ENSCSEG00000011996	rab11al	92	45.556	ENSCSEG00000017024	rab5c	81	45.556
ENSCSEG00000011996	rab11al	98	64.929	ENSCSEG00000017026	rab25a	99	64.929
ENSCSEG00000011996	rab11al	93	49.254	ENSCSEG00000017211	rab2a	99	47.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000011996	rab11al	100	94.444	ENSAPOG00000008251	rab11al	100	94.444	Acanthochromis_polyacanthus
ENSCSEG00000011996	rab11al	100	98.148	ENSACIG00000017403	rab11al	100	98.148	Amphilophus_citrinellus
ENSCSEG00000011996	rab11al	100	96.759	ENSAOCG00000015678	rab11al	100	96.759	Amphiprion_ocellaris
ENSCSEG00000011996	rab11al	100	96.759	ENSAPEG00000022135	rab11al	100	96.759	Amphiprion_percula
ENSCSEG00000011996	rab11al	100	96.759	ENSATEG00000006156	rab11al	100	96.759	Anabas_testudineus
ENSCSEG00000011996	rab11al	100	97.222	ENSACLG00000010268	rab11al	100	97.222	Astatotilapia_calliptera
ENSCSEG00000011996	rab11al	94	85.222	ENSAMXG00000024632	rab11al	93	85.222	Astyanax_mexicanus
ENSCSEG00000011996	rab11al	93	81.095	ENSCPBG00000025819	-	98	81.095	Chrysemys_picta_bellii
ENSCSEG00000011996	rab11al	100	94.444	ENSCVAG00000020016	rab11al	100	94.444	Cyprinodon_variegatus
ENSCSEG00000011996	rab11al	100	90.741	ENSDARG00000014340	rab11al	100	90.741	Danio_rerio
ENSCSEG00000011996	rab11al	100	92.593	ENSELUG00000012035	rab11al	100	92.593	Esox_lucius
ENSCSEG00000011996	rab11al	99	80.374	ENSFALG00000002594	-	91	80.374	Ficedula_albicollis
ENSCSEG00000011996	rab11al	97	95.673	ENSFHEG00000000832	rab11al	99	95.673	Fundulus_heteroclitus
ENSCSEG00000011996	rab11al	93	89.109	ENSGMOG00000006450	rab11al	100	89.109	Gadus_morhua
ENSCSEG00000011996	rab11al	99	78.972	ENSGALG00000037802	-	50	78.972	Gallus_gallus
ENSCSEG00000011996	rab11al	100	93.519	ENSGAFG00000021725	rab11al	100	93.519	Gambusia_affinis
ENSCSEG00000011996	rab11al	100	96.296	ENSGACG00000013259	rab11al	100	96.296	Gasterosteus_aculeatus
ENSCSEG00000011996	rab11al	99	80.930	ENSGAGG00000020702	-	99	80.930	Gopherus_agassizii
ENSCSEG00000011996	rab11al	100	97.222	ENSHBUG00000009333	rab11al	100	97.222	Haplochromis_burtoni
ENSCSEG00000011996	rab11al	100	94.907	ENSHCOG00000000232	rab11al	100	94.907	Hippocampus_comes
ENSCSEG00000011996	rab11al	100	91.667	ENSIPUG00000006091	RAB11A	100	91.667	Ictalurus_punctatus
ENSCSEG00000011996	rab11al	100	90.698	ENSKMAG00000015516	rab11al	100	90.698	Kryptolebias_marmoratus
ENSCSEG00000011996	rab11al	100	96.296	ENSLBEG00000016417	rab11al	100	96.296	Labrus_bergylta
ENSCSEG00000011996	rab11al	99	80.465	ENSLACG00000011380	rab11al	99	80.465	Latimeria_chalumnae
ENSCSEG00000011996	rab11al	100	92.558	ENSLOCG00000008865	rab11al	100	92.558	Lepisosteus_oculatus
ENSCSEG00000011996	rab11al	100	96.759	ENSMAMG00000010278	rab11al	100	96.759	Mastacembelus_armatus
ENSCSEG00000011996	rab11al	100	97.222	ENSMZEG00005017514	rab11al	100	97.222	Maylandia_zebra
ENSCSEG00000011996	rab11al	85	87.952	ENSMGAG00000004720	-	98	87.952	Meleagris_gallopavo
ENSCSEG00000011996	rab11al	99	84.804	ENSMMOG00000017117	rab11al	100	84.804	Mola_mola
ENSCSEG00000011996	rab11al	100	95.833	ENSMALG00000004093	rab11al	100	95.833	Monopterus_albus
ENSCSEG00000011996	rab11al	100	97.222	ENSNBRG00000005116	rab11al	100	97.222	Neolamprologus_brichardi
ENSCSEG00000011996	rab11al	100	97.685	ENSONIG00000002281	rab11al	100	97.685	Oreochromis_niloticus
ENSCSEG00000011996	rab11al	100	95.833	ENSORLG00000016126	rab11al	100	95.833	Oryzias_latipes
ENSCSEG00000011996	rab11al	100	95.833	ENSORLG00020013747	rab11al	100	95.833	Oryzias_latipes_hni
ENSCSEG00000011996	rab11al	100	95.833	ENSORLG00015019591	rab11al	100	95.833	Oryzias_latipes_hsok
ENSCSEG00000011996	rab11al	100	95.833	ENSOMEG00000020271	rab11al	100	95.833	Oryzias_melastigma
ENSCSEG00000011996	rab11al	100	90.278	ENSPKIG00000020893	rab11al	100	90.278	Paramormyrops_kingsleyae
ENSCSEG00000011996	rab11al	99	79.535	ENSPSIG00000013143	-	99	79.535	Pelodiscus_sinensis
ENSCSEG00000011996	rab11al	100	91.163	ENSPMGG00000004220	rab11al	100	91.163	Periophthalmus_magnuspinnatus
ENSCSEG00000011996	rab11al	100	94.444	ENSPFOG00000011316	rab11al	100	94.444	Poecilia_formosa
ENSCSEG00000011996	rab11al	100	94.444	ENSPLAG00000007986	rab11al	100	94.444	Poecilia_latipinna
ENSCSEG00000011996	rab11al	100	94.444	ENSPMEG00000000804	rab11al	100	94.444	Poecilia_mexicana
ENSCSEG00000011996	rab11al	100	94.444	ENSPREG00000017324	rab11al	100	94.444	Poecilia_reticulata
ENSCSEG00000011996	rab11al	100	97.222	ENSPNYG00000018244	rab11al	100	97.222	Pundamilia_nyererei
ENSCSEG00000011996	rab11al	100	91.204	ENSPNAG00000029085	rab11al	100	91.204	Pygocentrus_nattereri
ENSCSEG00000011996	rab11al	100	91.204	ENSSFOG00015008618	rab11al	100	91.204	Scleropages_formosus
ENSCSEG00000011996	rab11al	100	97.222	ENSSMAG00000016206	rab11al	100	97.222	Scophthalmus_maximus
ENSCSEG00000011996	rab11al	100	97.222	ENSSDUG00000006278	rab11al	100	97.222	Seriola_dumerili
ENSCSEG00000011996	rab11al	100	97.222	ENSSLDG00000012116	rab11al	100	97.222	Seriola_lalandi_dorsalis
ENSCSEG00000011996	rab11al	99	78.241	ENSSPUG00000002526	-	99	78.241	Sphenodon_punctatus
ENSCSEG00000011996	rab11al	100	95.833	ENSSPAG00000012044	rab11al	100	95.833	Stegastes_partitus
ENSCSEG00000011996	rab11al	93	82.673	ENSTGUG00000003680	-	99	82.673	Taeniopygia_guttata
ENSCSEG00000011996	rab11al	99	94.393	ENSTRUG00000007556	rab11al	99	94.393	Takifugu_rubripes
ENSCSEG00000011996	rab11al	100	93.519	ENSXCOG00000004226	rab11al	100	93.519	Xiphophorus_couchianus
ENSCSEG00000011996	rab11al	100	93.519	ENSXMAG00000027071	rab11al	100	93.519	Xiphophorus_maculatus