EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000012149 (Gene tree)
Gene ID: 103395887
Gene Symbol: rab11bb
Alias: zgc:92772
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 6734 bases
Position: chr20:1034640-1041373
Accession: 103395887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000018972	MMR_HSR1	PF01926.23	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000019208	-	2727	XM_008333720	ENSCSEP00000018972	218 (aa)	XP_008331942	UPI0000364045

Gene Model

Click here to download ENSCSEG00000012149's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000012149's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000012149	rab11bb	81	35.028	ENSCSEG00000011820	rras	89	35.028
ENSCSEG00000012149	rab11bb	96	40.000	ENSCSEG00000007292	rab30	97	40.000
ENSCSEG00000012149	rab11bb	96	43.062	ENSCSEG00000013400	rab35b	99	43.062
ENSCSEG00000012149	rab11bb	100	63.677	ENSCSEG00000011982	rab25b	97	64.679
ENSCSEG00000012149	rab11bb	81	38.462	ENSCSEG00000010116	rab9a	82	38.462
ENSCSEG00000012149	rab11bb	73	33.125	ENSCSEG00000016611	rheb	86	33.125
ENSCSEG00000012149	rab11bb	100	93.578	ENSCSEG00000007121	rab11ba	84	93.578
ENSCSEG00000012149	rab11bb	72	37.580	ENSCSEG00000004941	rab41	74	37.580
ENSCSEG00000012149	rab11bb	79	47.126	ENSCSEG00000019722	RAB39B	82	47.126
ENSCSEG00000012149	rab11bb	74	34.146	ENSCSEG00000018987	si:ch73-116o1.2	82	35.795
ENSCSEG00000012149	rab11bb	66	40.000	ENSCSEG00000014479	-	62	40.000
ENSCSEG00000012149	rab11bb	95	46.377	ENSCSEG00000020977	-	96	46.377
ENSCSEG00000012149	rab11bb	82	46.629	ENSCSEG00000002358	rab13	88	46.629
ENSCSEG00000012149	rab11bb	83	42.077	ENSCSEG00000010582	rab42a	84	42.077
ENSCSEG00000012149	rab11bb	100	97.248	ENSCSEG00000007239	-	100	97.248
ENSCSEG00000012149	rab11bb	78	45.614	ENSCSEG00000016803	rab18b	87	45.614
ENSCSEG00000012149	rab11bb	72	35.669	ENSCSEG00000003122	rab6ba	75	35.669
ENSCSEG00000012149	rab11bb	80	39.891	ENSCSEG00000006243	zgc:101559	78	39.891
ENSCSEG00000012149	rab11bb	76	43.373	ENSCSEG00000000205	RAB15	80	43.373
ENSCSEG00000012149	rab11bb	79	46.552	ENSCSEG00000017861	-	82	46.552
ENSCSEG00000012149	rab11bb	100	87.156	ENSCSEG00000007383	rab11a	100	87.156
ENSCSEG00000012149	rab11bb	99	82.488	ENSCSEG00000011996	rab11al	99	82.488
ENSCSEG00000012149	rab11bb	75	42.424	ENSCSEG00000016933	rab12	84	37.500
ENSCSEG00000012149	rab11bb	52	49.123	ENSCSEG00000009988	si:dkey-16l2.16	87	49.123
ENSCSEG00000012149	rab11bb	70	34.839	ENSCSEG00000005737	kras	87	35.928
ENSCSEG00000012149	rab11bb	82	38.587	ENSCSEG00000016284	rab33a	65	38.587
ENSCSEG00000012149	rab11bb	97	41.935	ENSCSEG00000010402	-	96	41.935
ENSCSEG00000012149	rab11bb	77	35.882	ENSCSEG00000005479	rabl2	72	35.882
ENSCSEG00000012149	rab11bb	78	34.239	ENSCSEG00000012961	rab34a	70	34.239
ENSCSEG00000012149	rab11bb	78	54.386	ENSCSEG00000017211	rab2a	81	54.386
ENSCSEG00000012149	rab11bb	99	63.594	ENSCSEG00000017026	rab25a	99	63.594
ENSCSEG00000012149	rab11bb	75	47.239	ENSCSEG00000017024	rab5c	74	47.239
ENSCSEG00000012149	rab11bb	77	52.695	ENSCSEG00000016498	rab14	78	52.695
ENSCSEG00000012149	rab11bb	57	38.095	ENSCSEG00000011160	rab20	52	38.095
ENSCSEG00000012149	rab11bb	76	43.373	ENSCSEG00000003768	rab15	71	43.373
ENSCSEG00000012149	rab11bb	74	30.675	ENSCSEG00000003537	rhebl1	88	30.675
ENSCSEG00000012149	rab11bb	77	33.929	ENSCSEG00000007927	hrasb	92	35.000
ENSCSEG00000012149	rab11bb	72	43.949	ENSCSEG00000019797	rab22a	81	43.949
ENSCSEG00000012149	rab11bb	79	40.678	ENSCSEG00000014467	rab9b	79	40.678
ENSCSEG00000012149	rab11bb	95	32.407	ENSCSEG00000019183	si:dkey-34d22.5	97	32.407
ENSCSEG00000012149	rab11bb	58	37.500	ENSCSEG00000018133	rab34b	51	37.500
ENSCSEG00000012149	rab11bb	96	45.455	ENSCSEG00000018732	rab1ba	99	45.455
ENSCSEG00000012149	rab11bb	83	38.172	ENSCSEG00000002970	RAB7A	81	38.172
ENSCSEG00000012149	rab11bb	74	31.792	ENSCSEG00000000717	rasl11a	69	31.792
ENSCSEG00000012149	rab11bb	78	36.111	ENSCSEG00000020348	rab33ba	76	36.111
ENSCSEG00000012149	rab11bb	84	41.361	ENSCSEG00000011816	rab18a	92	41.361
ENSCSEG00000012149	rab11bb	74	34.731	ENSCSEG00000015770	si:cabz01085950.1	82	34.731
ENSCSEG00000012149	rab11bb	96	46.226	ENSCSEG00000014416	zgc:171927	99	46.226
ENSCSEG00000012149	rab11bb	72	40.491	ENSCSEG00000005357	-	78	40.491
ENSCSEG00000012149	rab11bb	68	34.000	ENSCSEG00000010565	rab23	82	33.728
ENSCSEG00000012149	rab11bb	72	36.306	ENSCSEG00000016556	rab6bb	75	36.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000012149	rab11bb	100	100.000	ENSAPOG00000023455	rab11bb	100	100.000	Acanthochromis_polyacanthus
ENSCSEG00000012149	rab11bb	100	87.156	ENSACIG00000019631	rab11bb	100	87.156	Amphilophus_citrinellus
ENSCSEG00000012149	rab11bb	100	97.706	ENSACIG00000024376	-	100	97.706	Amphilophus_citrinellus
ENSCSEG00000012149	rab11bb	100	97.706	ENSAOCG00000018849	-	100	97.706	Amphiprion_ocellaris
ENSCSEG00000012149	rab11bb	100	100.000	ENSAOCG00000018239	rab11bb	100	100.000	Amphiprion_ocellaris
ENSCSEG00000012149	rab11bb	100	100.000	ENSAPEG00000016590	rab11bb	100	100.000	Amphiprion_percula
ENSCSEG00000012149	rab11bb	100	100.000	ENSATEG00000017696	rab11bb	100	100.000	Anabas_testudineus
ENSCSEG00000012149	rab11bb	100	98.165	ENSATEG00000023725	-	100	98.165	Anabas_testudineus
ENSCSEG00000012149	rab11bb	94	98.058	ENSAPLG00000011046	-	94	98.058	Anas_platyrhynchos
ENSCSEG00000012149	rab11bb	100	100.000	ENSACLG00000007076	rab11bb	100	100.000	Astatotilapia_calliptera
ENSCSEG00000012149	rab11bb	100	97.706	ENSACLG00000005446	-	100	97.706	Astatotilapia_calliptera
ENSCSEG00000012149	rab11bb	100	98.624	ENSAMXG00000042655	rab11bb	100	98.624	Astyanax_mexicanus
ENSCSEG00000012149	rab11bb	100	96.789	ENSAMXG00000037623	-	100	96.789	Astyanax_mexicanus
ENSCSEG00000012149	rab11bb	100	96.330	ENSBTAG00000002475	RAB11B	100	96.330	Bos_taurus
ENSCSEG00000012149	rab11bb	96	94.737	ENSCHIG00000022426	-	93	94.737	Capra_hircus
ENSCSEG00000012149	rab11bb	100	96.330	ENSCATG00000029188	-	100	96.330	Cercocebus_atys
ENSCSEG00000012149	rab11bb	100	97.248	ENSCPBG00000017056	-	100	97.248	Chrysemys_picta_bellii
ENSCSEG00000012149	rab11bb	100	96.789	ENSCVAG00000019718	-	100	96.789	Cyprinodon_variegatus
ENSCSEG00000012149	rab11bb	100	94.495	ENSCVAG00000019751	-	100	94.495	Cyprinodon_variegatus
ENSCSEG00000012149	rab11bb	100	100.000	ENSCVAG00000017021	-	100	100.000	Cyprinodon_variegatus
ENSCSEG00000012149	rab11bb	100	98.165	ENSDARG00000090086	rab11bb	100	98.165	Danio_rerio
ENSCSEG00000012149	rab11bb	99	94.931	ENSETEG00000000905	-	99	94.931	Echinops_telfairi
ENSCSEG00000012149	rab11bb	99	94.884	ENSEASG00005003708	-	99	94.884	Equus_asinus_asinus
ENSCSEG00000012149	rab11bb	99	94.884	ENSECAG00000000716	RAB11B	99	94.884	Equus_caballus
ENSCSEG00000012149	rab11bb	100	96.330	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSCSEG00000012149	rab11bb	100	98.165	ENSELUG00000021148	rab11bb	100	98.165	Esox_lucius
ENSCSEG00000012149	rab11bb	100	95.413	ENSELUG00000000916	-	100	95.413	Esox_lucius
ENSCSEG00000012149	rab11bb	100	97.248	ENSFALG00000011828	-	100	97.248	Ficedula_albicollis
ENSCSEG00000012149	rab11bb	100	100.000	ENSFHEG00000018353	rab11bb	100	100.000	Fundulus_heteroclitus
ENSCSEG00000012149	rab11bb	100	98.165	ENSFHEG00000022676	-	100	98.165	Fundulus_heteroclitus
ENSCSEG00000012149	rab11bb	100	99.541	ENSGMOG00000009211	rab11bb	100	99.541	Gadus_morhua
ENSCSEG00000012149	rab11bb	99	93.519	ENSGMOG00000009668	-	99	93.519	Gadus_morhua
ENSCSEG00000012149	rab11bb	100	97.248	ENSGALG00000000613	RAB11B	100	97.248	Gallus_gallus
ENSCSEG00000012149	rab11bb	100	100.000	ENSGAFG00000007102	rab11bb	100	100.000	Gambusia_affinis
ENSCSEG00000012149	rab11bb	100	99.541	ENSGACG00000015479	rab11bb	100	99.541	Gasterosteus_aculeatus
ENSCSEG00000012149	rab11bb	100	94.495	ENSGACG00000013297	-	99	94.495	Gasterosteus_aculeatus
ENSCSEG00000012149	rab11bb	100	96.330	ENSGGOG00000014516	RAB11B	100	96.330	Gorilla_gorilla
ENSCSEG00000012149	rab11bb	100	97.706	ENSHBUG00000009947	-	100	97.706	Haplochromis_burtoni
ENSCSEG00000012149	rab11bb	100	100.000	ENSHBUG00000014777	rab11bb	100	100.000	Haplochromis_burtoni
ENSCSEG00000012149	rab11bb	100	93.578	ENSHCOG00000000985	-	100	93.578	Hippocampus_comes
ENSCSEG00000012149	rab11bb	100	95.413	ENSHCOG00000000954	-	100	95.413	Hippocampus_comes
ENSCSEG00000012149	rab11bb	100	99.541	ENSHCOG00000002423	rab11bb	100	99.541	Hippocampus_comes
ENSCSEG00000012149	rab11bb	100	97.248	ENSIPUG00000025100	rab11b	100	97.248	Ictalurus_punctatus
ENSCSEG00000012149	rab11bb	100	99.083	ENSIPUG00000019927	rab11bb	100	99.083	Ictalurus_punctatus
ENSCSEG00000012149	rab11bb	100	97.706	ENSKMAG00000006170	-	100	97.706	Kryptolebias_marmoratus
ENSCSEG00000012149	rab11bb	100	100.000	ENSKMAG00000009033	rab11bb	100	100.000	Kryptolebias_marmoratus
ENSCSEG00000012149	rab11bb	100	99.541	ENSLBEG00000015248	rab11bb	100	99.541	Labrus_bergylta
ENSCSEG00000012149	rab11bb	100	96.789	ENSLBEG00000004172	-	100	96.789	Labrus_bergylta
ENSCSEG00000012149	rab11bb	100	89.450	ENSLBEG00000005981	-	100	89.450	Labrus_bergylta
ENSCSEG00000012149	rab11bb	100	97.248	ENSLACG00000016857	-	100	97.248	Latimeria_chalumnae
ENSCSEG00000012149	rab11bb	100	96.330	ENSMFAG00000003654	RAB11B	100	96.330	Macaca_fascicularis
ENSCSEG00000012149	rab11bb	100	96.330	ENSMLEG00000030601	-	100	96.330	Mandrillus_leucophaeus
ENSCSEG00000012149	rab11bb	100	99.541	ENSMAMG00000006378	rab11bb	100	99.541	Mastacembelus_armatus
ENSCSEG00000012149	rab11bb	100	96.789	ENSMAMG00000018533	-	100	96.789	Mastacembelus_armatus
ENSCSEG00000012149	rab11bb	100	100.000	ENSMZEG00005003352	rab11bb	100	100.000	Maylandia_zebra
ENSCSEG00000012149	rab11bb	100	97.706	ENSMZEG00005010975	-	100	97.706	Maylandia_zebra
ENSCSEG00000012149	rab11bb	100	96.330	ENSMICG00000034065	-	100	96.330	Microcebus_murinus
ENSCSEG00000012149	rab11bb	99	95.853	ENSMMOG00000001238	-	99	95.853	Mola_mola
ENSCSEG00000012149	rab11bb	100	97.706	ENSMMOG00000001250	-	100	97.706	Mola_mola
ENSCSEG00000012149	rab11bb	94	100.000	ENSMMOG00000007917	rab11bb	100	100.000	Mola_mola
ENSCSEG00000012149	rab11bb	100	97.248	ENSMODG00000003841	-	100	97.248	Monodelphis_domestica
ENSCSEG00000012149	rab11bb	100	100.000	ENSMALG00000022187	rab11bb	100	100.000	Monopterus_albus
ENSCSEG00000012149	rab11bb	94	87.923	ENSMLUG00000006677	-	100	87.923	Myotis_lucifugus
ENSCSEG00000012149	rab11bb	100	97.706	ENSNBRG00000023885	-	100	97.706	Neolamprologus_brichardi
ENSCSEG00000012149	rab11bb	100	100.000	ENSNBRG00000000372	rab11bb	100	100.000	Neolamprologus_brichardi
ENSCSEG00000012149	rab11bb	100	97.248	ENSMEUG00000003686	-	100	97.248	Notamacropus_eugenii
ENSCSEG00000012149	rab11bb	100	100.000	ENSONIG00000010435	rab11bb	100	100.000	Oreochromis_niloticus
ENSCSEG00000012149	rab11bb	100	97.706	ENSONIG00000002544	-	100	97.706	Oreochromis_niloticus
ENSCSEG00000012149	rab11bb	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSCSEG00000012149	rab11bb	100	99.541	ENSORLG00000013938	rab11bb	100	99.541	Oryzias_latipes
ENSCSEG00000012149	rab11bb	99	95.853	ENSORLG00000015284	-	72	95.853	Oryzias_latipes
ENSCSEG00000012149	rab11bb	100	99.541	ENSORLG00020019393	rab11bb	100	99.541	Oryzias_latipes_hni
ENSCSEG00000012149	rab11bb	99	95.853	ENSORLG00020020844	RAB11B	99	95.853	Oryzias_latipes_hni
ENSCSEG00000012149	rab11bb	99	95.853	ENSORLG00015016999	RAB11B	99	95.853	Oryzias_latipes_hsok
ENSCSEG00000012149	rab11bb	100	99.541	ENSORLG00015020173	rab11bb	100	99.541	Oryzias_latipes_hsok
ENSCSEG00000012149	rab11bb	100	100.000	ENSOMEG00000017806	-	100	100.000	Oryzias_melastigma
ENSCSEG00000012149	rab11bb	100	96.789	ENSOMEG00000002562	-	100	96.789	Oryzias_melastigma
ENSCSEG00000012149	rab11bb	100	96.330	ENSPPAG00000028589	-	100	96.330	Pan_paniscus
ENSCSEG00000012149	rab11bb	100	96.330	ENSPTRG00000010422	RAB11B	100	96.330	Pan_troglodytes
ENSCSEG00000012149	rab11bb	100	96.330	ENSPANG00000007765	-	100	96.330	Papio_anubis
ENSCSEG00000012149	rab11bb	98	97.196	ENSPKIG00000001389	-	69	97.196	Paramormyrops_kingsleyae
ENSCSEG00000012149	rab11bb	100	99.083	ENSPKIG00000011640	rab11bb	100	99.083	Paramormyrops_kingsleyae
ENSCSEG00000012149	rab11bb	100	98.624	ENSPKIG00000011703	-	100	98.624	Paramormyrops_kingsleyae
ENSCSEG00000012149	rab11bb	98	93.151	ENSPSIG00000010242	-	85	93.151	Pelodiscus_sinensis
ENSCSEG00000012149	rab11bb	100	96.789	ENSPMGG00000014333	-	100	96.789	Periophthalmus_magnuspinnatus
ENSCSEG00000012149	rab11bb	99	93.088	ENSPMGG00000014336	-	99	93.088	Periophthalmus_magnuspinnatus
ENSCSEG00000012149	rab11bb	100	100.000	ENSPMGG00000009435	rab11bb	100	100.000	Periophthalmus_magnuspinnatus
ENSCSEG00000012149	rab11bb	97	95.755	ENSPCIG00000020371	-	99	95.755	Phascolarctos_cinereus
ENSCSEG00000012149	rab11bb	100	100.000	ENSPFOG00000024114	-	100	100.000	Poecilia_formosa
ENSCSEG00000012149	rab11bb	100	97.706	ENSPFOG00000006224	-	100	97.706	Poecilia_formosa
ENSCSEG00000012149	rab11bb	100	100.000	ENSPLAG00000001598	rab11bb	100	100.000	Poecilia_latipinna
ENSCSEG00000012149	rab11bb	100	97.706	ENSPLAG00000014207	-	100	97.706	Poecilia_latipinna
ENSCSEG00000012149	rab11bb	100	100.000	ENSPMEG00000012389	rab11bb	100	100.000	Poecilia_mexicana
ENSCSEG00000012149	rab11bb	100	97.706	ENSPMEG00000007842	-	100	97.706	Poecilia_mexicana
ENSCSEG00000012149	rab11bb	100	97.248	ENSPREG00000006336	-	100	97.248	Poecilia_reticulata
ENSCSEG00000012149	rab11bb	100	100.000	ENSPREG00000014269	rab11bb	100	100.000	Poecilia_reticulata
ENSCSEG00000012149	rab11bb	100	100.000	ENSPNYG00000004098	rab11bb	100	100.000	Pundamilia_nyererei
ENSCSEG00000012149	rab11bb	100	97.706	ENSPNYG00000019611	-	100	97.706	Pundamilia_nyererei
ENSCSEG00000012149	rab11bb	100	96.330	ENSRROG00000037812	-	100	96.330	Rhinopithecus_roxellana
ENSCSEG00000012149	rab11bb	97	96.226	ENSSHAG00000006816	-	97	96.226	Sarcophilus_harrisii
ENSCSEG00000012149	rab11bb	100	97.706	ENSSFOG00015009042	rab11bb	100	97.706	Scleropages_formosus
ENSCSEG00000012149	rab11bb	100	75.229	ENSSFOG00015006245	-	100	75.229	Scleropages_formosus
ENSCSEG00000012149	rab11bb	100	94.954	ENSSMAG00000018613	-	100	94.954	Scophthalmus_maximus
ENSCSEG00000012149	rab11bb	100	99.541	ENSSMAG00000004922	rab11bb	100	99.541	Scophthalmus_maximus
ENSCSEG00000012149	rab11bb	100	100.000	ENSSDUG00000013558	rab11bb	100	100.000	Seriola_dumerili
ENSCSEG00000012149	rab11bb	100	97.706	ENSSDUG00000002934	-	100	97.706	Seriola_dumerili
ENSCSEG00000012149	rab11bb	100	97.706	ENSSLDG00000005275	-	100	97.706	Seriola_lalandi_dorsalis
ENSCSEG00000012149	rab11bb	100	100.000	ENSSLDG00000020676	rab11bb	100	100.000	Seriola_lalandi_dorsalis
ENSCSEG00000012149	rab11bb	100	96.789	ENSSPUG00000002243	-	100	96.789	Sphenodon_punctatus
ENSCSEG00000012149	rab11bb	100	97.706	ENSSPAG00000014559	-	100	97.706	Stegastes_partitus
ENSCSEG00000012149	rab11bb	100	100.000	ENSSPAG00000011419	rab11bb	100	100.000	Stegastes_partitus
ENSCSEG00000012149	rab11bb	100	97.248	ENSTGUG00000000084	-	100	97.248	Taeniopygia_guttata
ENSCSEG00000012149	rab11bb	100	100.000	ENSTRUG00000022029	rab11bb	100	100.000	Takifugu_rubripes
ENSCSEG00000012149	rab11bb	99	94.931	ENSTRUG00000021614	-	99	94.931	Takifugu_rubripes
ENSCSEG00000012149	rab11bb	99	97.685	ENSTRUG00000021619	-	100	97.685	Takifugu_rubripes
ENSCSEG00000012149	rab11bb	93	96.552	ENSTNIG00000002003	-	100	96.552	Tetraodon_nigroviridis
ENSCSEG00000012149	rab11bb	100	98.624	ENSTNIG00000011081	rab11bb	100	98.624	Tetraodon_nigroviridis
ENSCSEG00000012149	rab11bb	99	97.685	ENSTNIG00000013182	-	100	97.685	Tetraodon_nigroviridis
ENSCSEG00000012149	rab11bb	99	94.470	ENSTNIG00000013184	-	99	94.470	Tetraodon_nigroviridis
ENSCSEG00000012149	rab11bb	94	97.073	ENSUAMG00000006639	-	99	97.073	Ursus_americanus
ENSCSEG00000012149	rab11bb	100	97.260	ENSXETG00000025484	rab11b.1	99	97.260	Xenopus_tropicalis
ENSCSEG00000012149	rab11bb	100	100.000	ENSXCOG00000008042	-	100	100.000	Xiphophorus_couchianus
ENSCSEG00000012149	rab11bb	100	97.706	ENSXCOG00000009190	-	100	97.706	Xiphophorus_couchianus
ENSCSEG00000012149	rab11bb	100	97.248	ENSXMAG00000024840	-	100	97.248	Xiphophorus_maculatus
ENSCSEG00000012149	rab11bb	100	100.000	ENSXMAG00000011926	rab11bb	100	100.000	Xiphophorus_maculatus