EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000012193 (Gene tree)
Gene ID: 103394130
Gene Symbol: tra2a
Alias: zgc:64175
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6159 bases
Position: chr18:4874017-4880175
Accession: 103394130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000019055	RRM_1	PF00076.22	1.5e-19	1	1
ENSCSEP00000019042	RRM_1	PF00076.22	2.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000019288	-	603	-	ENSCSEP00000019055	200 (aa)	-	-
ENSCSET00000019276	-	1748	XM_008331282	ENSCSEP00000019042	301 (aa)	XP_008329507	UPI000497AA2D

Gene Model

Click here to download ENSCSEG00000012193's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000012193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000012193	tra2a	60	81.513	ENSCSEG00000011697	-	63	83.036
ENSCSEG00000012193	tra2a	55	35.484	ENSCSEG00000021095	elavl3	75	35.484
ENSCSEG00000012193	tra2a	63	80.952	ENSCSEG00000002877	TRA2B	82	65.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000012193	tra2a	90	71.795	ENSG00000164548	TRA2A	90	71.062	Homo_sapiens
ENSCSEG00000012193	tra2a	90	77.941	ENSAPOG00000017425	tra2a	90	79.779	Acanthochromis_polyacanthus
ENSCSEG00000012193	tra2a	90	69.597	ENSAMEG00000003501	TRA2A	78	69.597	Ailuropoda_melanoleuca
ENSCSEG00000012193	tra2a	98	72.685	ENSACIG00000001333	tra2a	90	77.308	Amphilophus_citrinellus
ENSCSEG00000012193	tra2a	90	78.676	ENSAOCG00000015445	tra2a	90	80.515	Amphiprion_ocellaris
ENSCSEG00000012193	tra2a	98	76.636	ENSAPEG00000018557	tra2a	90	80.515	Amphiprion_percula
ENSCSEG00000012193	tra2a	90	79.779	ENSATEG00000000671	tra2a	90	81.618	Anabas_testudineus
ENSCSEG00000012193	tra2a	86	69.582	ENSAPLG00000013689	TRA2A	90	69.202	Anas_platyrhynchos
ENSCSEG00000012193	tra2a	90	73.529	ENSACAG00000013502	TRA2A	90	73.162	Anolis_carolinensis
ENSCSEG00000012193	tra2a	51	94.059	ENSANAG00000035184	TRA2A	82	72.165	Aotus_nancymaae
ENSCSEG00000012193	tra2a	90	78.676	ENSACLG00000024845	tra2a	90	80.515	Astatotilapia_calliptera
ENSCSEG00000012193	tra2a	63	90.476	ENSAMXG00000005553	tra2a	100	70.763	Astyanax_mexicanus
ENSCSEG00000012193	tra2a	90	70.696	ENSBTAG00000012622	TRA2A	90	70.696	Bos_taurus
ENSCSEG00000012193	tra2a	90	71.795	ENSCJAG00000001509	-	90	71.062	Callithrix_jacchus
ENSCSEG00000012193	tra2a	94	70.175	ENSCJAG00000045802	-	96	69.231	Callithrix_jacchus
ENSCSEG00000012193	tra2a	90	70.696	ENSCAFG00000002788	TRA2A	91	70.696	Canis_familiaris
ENSCSEG00000012193	tra2a	64	87.402	ENSCAFG00020002745	TRA2A	65	74.227	Canis_lupus_dingo
ENSCSEG00000012193	tra2a	90	71.795	ENSTSYG00000000388	TRA2A	90	71.062	Carlito_syrichta
ENSCSEG00000012193	tra2a	87	60.076	ENSCAPG00000017377	TRA2A	88	60.076	Cavia_aperea
ENSCSEG00000012193	tra2a	90	71.795	ENSCPOG00000010739	TRA2A	90	71.062	Cavia_porcellus
ENSCSEG00000012193	tra2a	90	71.795	ENSCCAG00000019576	TRA2A	90	71.062	Cebus_capucinus
ENSCSEG00000012193	tra2a	90	71.795	ENSCATG00000041219	TRA2A	90	71.062	Cercocebus_atys
ENSCSEG00000012193	tra2a	90	71.795	ENSCLAG00000007917	TRA2A	90	71.062	Chinchilla_lanigera
ENSCSEG00000012193	tra2a	90	71.795	ENSCSAG00000014051	TRA2A	90	71.062	Chlorocebus_sabaeus
ENSCSEG00000012193	tra2a	90	71.429	ENSCHOG00000001130	TRA2A	90	70.696	Choloepus_hoffmanni
ENSCSEG00000012193	tra2a	90	70.545	ENSCPBG00000022466	TRA2A	90	70.182	Chrysemys_picta_bellii
ENSCSEG00000012193	tra2a	90	71.795	ENSCANG00000031292	TRA2A	90	71.062	Colobus_angolensis_palliatus
ENSCSEG00000012193	tra2a	90	73.529	ENSCGRG00001019980	Tra2a	90	73.162	Cricetulus_griseus_chok1gshd
ENSCSEG00000012193	tra2a	86	74.615	ENSCGRG00000006087	Tra2a	89	74.231	Cricetulus_griseus_crigri
ENSCSEG00000012193	tra2a	55	88.182	ENSDARG00000007863	tra2a	90	74.088	Danio_rerio
ENSCSEG00000012193	tra2a	90	72.161	ENSDNOG00000039446	TRA2A	90	71.062	Dasypus_novemcinctus
ENSCSEG00000012193	tra2a	90	73.529	ENSDORG00000009361	Tra2a	90	72.426	Dipodomys_ordii
ENSCSEG00000012193	tra2a	57	91.228	ENSETEG00000007250	TRA2A	62	74.112	Echinops_telfairi
ENSCSEG00000012193	tra2a	90	70.696	ENSEASG00005022002	TRA2A	90	70.696	Equus_asinus_asinus
ENSCSEG00000012193	tra2a	90	70.696	ENSECAG00000011508	TRA2A	90	70.696	Equus_caballus
ENSCSEG00000012193	tra2a	90	71.062	ENSEEUG00000015674	TRA2A	90	70.330	Erinaceus_europaeus
ENSCSEG00000012193	tra2a	98	74.074	ENSELUG00000005846	tra2a	91	68.792	Esox_lucius
ENSCSEG00000012193	tra2a	90	70.696	ENSFCAG00000005361	TRA2A	90	70.696	Felis_catus
ENSCSEG00000012193	tra2a	86	70.115	ENSFALG00000009605	TRA2A	89	70.115	Ficedula_albicollis
ENSCSEG00000012193	tra2a	90	72.161	ENSFDAG00000004949	TRA2A	90	71.062	Fukomys_damarensis
ENSCSEG00000012193	tra2a	90	68.231	ENSGMOG00000013740	tra2a	91	67.870	Gadus_morhua
ENSCSEG00000012193	tra2a	90	68.727	ENSGALG00000010973	TRA2A	90	68.364	Gallus_gallus
ENSCSEG00000012193	tra2a	98	76.923	ENSGACG00000006878	tra2a	90	71.533	Gasterosteus_aculeatus
ENSCSEG00000012193	tra2a	90	69.818	ENSGAGG00000005793	TRA2A	90	69.455	Gopherus_agassizii
ENSCSEG00000012193	tra2a	90	71.795	ENSGGOG00000009053	TRA2A	90	71.062	Gorilla_gorilla
ENSCSEG00000012193	tra2a	90	78.309	ENSHBUG00000018234	tra2a	90	80.147	Haplochromis_burtoni
ENSCSEG00000012193	tra2a	90	71.795	ENSHGLG00000012168	TRA2A	90	71.062	Heterocephalus_glaber_female
ENSCSEG00000012193	tra2a	90	71.795	ENSHGLG00100014577	TRA2A	90	71.062	Heterocephalus_glaber_male
ENSCSEG00000012193	tra2a	55	78.182	ENSHCOG00000018058	-	97	78.182	Hippocampus_comes
ENSCSEG00000012193	tra2a	79	61.143	ENSHCOG00000006320	tra2a	96	62.371	Hippocampus_comes
ENSCSEG00000012193	tra2a	55	78.182	ENSHCOG00000006314	tra2a	75	65.101	Hippocampus_comes
ENSCSEG00000012193	tra2a	90	71.795	ENSSTOG00000012073	TRA2A	90	71.062	Ictidomys_tridecemlineatus
ENSCSEG00000012193	tra2a	90	73.529	ENSJJAG00000022787	Tra2a	90	72.426	Jaculus_jaculus
ENSCSEG00000012193	tra2a	98	73.364	ENSLBEG00000005297	tra2a	88	76.154	Labrus_bergylta
ENSCSEG00000012193	tra2a	90	70.221	ENSLACG00000014765	TRA2A	90	69.853	Latimeria_chalumnae
ENSCSEG00000012193	tra2a	98	71.963	ENSLOCG00000011615	-	90	71.273	Lepisosteus_oculatus
ENSCSEG00000012193	tra2a	62	83.871	ENSLOCG00000009558	-	61	68.182	Lepisosteus_oculatus
ENSCSEG00000012193	tra2a	90	72.161	ENSLAFG00000006598	TRA2A	90	71.429	Loxodonta_africana
ENSCSEG00000012193	tra2a	90	71.795	ENSMFAG00000043211	TRA2A	90	71.062	Macaca_fascicularis
ENSCSEG00000012193	tra2a	90	71.795	ENSMMUG00000006286	TRA2A	82	87.413	Macaca_mulatta
ENSCSEG00000012193	tra2a	90	71.795	ENSMNEG00000040670	TRA2A	90	71.062	Macaca_nemestrina
ENSCSEG00000012193	tra2a	90	71.795	ENSMLEG00000032154	TRA2A	90	71.062	Mandrillus_leucophaeus
ENSCSEG00000012193	tra2a	98	75.234	ENSMAMG00000008575	tra2a	91	78.970	Mastacembelus_armatus
ENSCSEG00000012193	tra2a	90	78.676	ENSMZEG00005009142	tra2a	90	80.515	Maylandia_zebra
ENSCSEG00000012193	tra2a	90	68.000	ENSMGAG00000010514	TRA2A	89	69.202	Meleagris_gallopavo
ENSCSEG00000012193	tra2a	98	68.205	ENSMICG00000036849	-	88	58.088	Microcebus_murinus
ENSCSEG00000012193	tra2a	90	71.795	ENSMICG00000043639	-	90	71.062	Microcebus_murinus
ENSCSEG00000012193	tra2a	64	83.465	ENSMOCG00000010249	-	53	81.481	Microtus_ochrogaster
ENSCSEG00000012193	tra2a	91	68.478	ENSMOCG00000006467	-	98	61.187	Microtus_ochrogaster
ENSCSEG00000012193	tra2a	98	84.264	ENSMMOG00000020174	tra2a	83	71.538	Mola_mola
ENSCSEG00000012193	tra2a	90	72.527	ENSMODG00000000807	TRA2A	90	71.795	Monodelphis_domestica
ENSCSEG00000012193	tra2a	98	74.299	ENSMALG00000020875	tra2a	90	79.853	Monopterus_albus
ENSCSEG00000012193	tra2a	90	73.529	ENSMUSG00000029817	Tra2a	90	73.162	Mus_musculus
ENSCSEG00000012193	tra2a	90	73.162	MGP_PahariEiJ_G0022115	Tra2a	90	72.794	Mus_pahari
ENSCSEG00000012193	tra2a	90	73.529	MGP_SPRETEiJ_G0029368	Tra2a	90	73.162	Mus_spretus
ENSCSEG00000012193	tra2a	98	78.061	ENSMPUG00000013480	TRA2A	90	70.330	Mustela_putorius_furo
ENSCSEG00000012193	tra2a	90	71.795	ENSMLUG00000013972	TRA2A	90	70.696	Myotis_lucifugus
ENSCSEG00000012193	tra2a	90	73.162	ENSNGAG00000023805	Tra2a	90	72.059	Nannospalax_galili
ENSCSEG00000012193	tra2a	56	94.643	ENSNBRG00000005992	tra2a	73	84.211	Neolamprologus_brichardi
ENSCSEG00000012193	tra2a	90	71.795	ENSNLEG00000014794	TRA2A	90	71.062	Nomascus_leucogenys
ENSCSEG00000012193	tra2a	56	66.964	ENSNLEG00000029659	-	82	66.667	Nomascus_leucogenys
ENSCSEG00000012193	tra2a	98	80.513	ENSMEUG00000001202	TRA2A	90	72.794	Notamacropus_eugenii
ENSCSEG00000012193	tra2a	98	78.061	ENSOPRG00000007606	TRA2A	90	70.696	Ochotona_princeps
ENSCSEG00000012193	tra2a	90	71.795	ENSODEG00000008335	TRA2A	90	71.062	Octodon_degus
ENSCSEG00000012193	tra2a	90	77.818	ENSONIG00000004503	tra2a	90	79.636	Oreochromis_niloticus
ENSCSEG00000012193	tra2a	90	66.904	ENSOANG00000014202	TRA2A	90	66.667	Ornithorhynchus_anatinus
ENSCSEG00000012193	tra2a	98	78.571	ENSOCUG00000024139	TRA2A	90	71.062	Oryctolagus_cuniculus
ENSCSEG00000012193	tra2a	96	68.229	ENSORLG00000022191	tra2a	64	62.755	Oryzias_latipes
ENSCSEG00000012193	tra2a	96	68.229	ENSORLG00020003490	tra2a	64	62.245	Oryzias_latipes_hni
ENSCSEG00000012193	tra2a	96	68.229	ENSORLG00015015485	tra2a	64	61.735	Oryzias_latipes_hsok
ENSCSEG00000012193	tra2a	96	67.708	ENSOMEG00000017864	tra2a	62	62.694	Oryzias_melastigma
ENSCSEG00000012193	tra2a	86	72.797	ENSOGAG00000009733	TRA2A	85	72.031	Otolemur_garnettii
ENSCSEG00000012193	tra2a	98	75.385	ENSOARG00000002323	-	89	68.864	Ovis_aries
ENSCSEG00000012193	tra2a	90	71.062	ENSOARG00000013147	TRA2A	90	70.696	Ovis_aries
ENSCSEG00000012193	tra2a	90	71.795	ENSPPAG00000034382	TRA2A	90	71.062	Pan_paniscus
ENSCSEG00000012193	tra2a	90	70.696	ENSPPRG00000015216	TRA2A	90	70.696	Panthera_pardus
ENSCSEG00000012193	tra2a	90	70.696	ENSPTIG00000021114	TRA2A	90	70.696	Panthera_tigris_altaica
ENSCSEG00000012193	tra2a	91	72.101	ENSPTRG00000018988	TRA2A	91	71.062	Pan_troglodytes
ENSCSEG00000012193	tra2a	90	71.795	ENSPTRG00000046098	-	90	71.062	Pan_troglodytes
ENSCSEG00000012193	tra2a	90	71.795	ENSPANG00000014541	TRA2A	90	71.062	Papio_anubis
ENSCSEG00000012193	tra2a	98	74.178	ENSPKIG00000012298	tra2a	90	70.438	Paramormyrops_kingsleyae
ENSCSEG00000012193	tra2a	89	71.004	ENSPSIG00000014993	TRA2A	90	70.260	Pelodiscus_sinensis
ENSCSEG00000012193	tra2a	90	73.897	ENSPEMG00000008564	-	90	72.794	Peromyscus_maniculatus_bairdii
ENSCSEG00000012193	tra2a	64	75.591	ENSPMAG00000007947	tra2a	60	59.788	Petromyzon_marinus
ENSCSEG00000012193	tra2a	90	72.527	ENSPCIG00000007917	TRA2A	90	71.795	Phascolarctos_cinereus
ENSCSEG00000012193	tra2a	90	71.795	ENSPPYG00000017728	TRA2A	90	71.062	Pongo_abelii
ENSCSEG00000012193	tra2a	90	72.161	ENSPCAG00000004148	TRA2A	91	71.062	Procavia_capensis
ENSCSEG00000012193	tra2a	64	65.979	ENSPCOG00000020465	TRA2A	88	54.945	Propithecus_coquereli
ENSCSEG00000012193	tra2a	90	71.795	ENSPVAG00000011298	TRA2A	90	71.062	Pteropus_vampyrus
ENSCSEG00000012193	tra2a	56	94.643	ENSPNYG00000020134	tra2a	91	76.154	Pundamilia_nyererei
ENSCSEG00000012193	tra2a	90	69.343	ENSPNAG00000000482	tra2a	90	70.803	Pygocentrus_nattereri
ENSCSEG00000012193	tra2a	90	73.529	ENSRNOG00000009156	Tra2a	90	73.162	Rattus_norvegicus
ENSCSEG00000012193	tra2a	64	87.500	ENSRBIG00000036805	TRA2A	70	85.926	Rhinopithecus_bieti
ENSCSEG00000012193	tra2a	90	71.795	ENSRROG00000030758	TRA2A	90	71.062	Rhinopithecus_roxellana
ENSCSEG00000012193	tra2a	90	71.795	ENSSBOG00000031562	TRA2A	90	71.062	Saimiri_boliviensis_boliviensis
ENSCSEG00000012193	tra2a	90	71.533	ENSSHAG00000005727	TRA2A	85	73.180	Sarcophilus_harrisii
ENSCSEG00000012193	tra2a	90	74.088	ENSSFOG00015014004	tra2a	90	73.723	Scleropages_formosus
ENSCSEG00000012193	tra2a	94	73.852	ENSSMAG00000014242	tra2a	88	75.676	Scophthalmus_maximus
ENSCSEG00000012193	tra2a	90	80.952	ENSSDUG00000005610	tra2a	90	82.784	Seriola_dumerili
ENSCSEG00000012193	tra2a	56	94.643	ENSSLDG00000025577	tra2a	81	79.532	Seriola_lalandi_dorsalis
ENSCSEG00000012193	tra2a	63	64.583	ENSSARG00000012900	TRA2A	62	64.583	Sorex_araneus
ENSCSEG00000012193	tra2a	90	71.739	ENSSPUG00000006143	TRA2A	90	71.377	Sphenodon_punctatus
ENSCSEG00000012193	tra2a	98	77.103	ENSSPAG00000004184	tra2a	90	83.456	Stegastes_partitus
ENSCSEG00000012193	tra2a	90	70.696	ENSSSCG00000015387	TRA2A	90	70.696	Sus_scrofa
ENSCSEG00000012193	tra2a	64	86.614	ENSTGUG00000002795	TRA2A	55	84.444	Taeniopygia_guttata
ENSCSEG00000012193	tra2a	64	87.402	ENSTBEG00000013773	TRA2A	75	72.174	Tupaia_belangeri
ENSCSEG00000012193	tra2a	90	70.330	ENSTTRG00000008922	TRA2A	90	70.330	Tursiops_truncatus
ENSCSEG00000012193	tra2a	56	91.071	ENSUMAG00000001181	TRA2A	79	77.326	Ursus_maritimus
ENSCSEG00000012193	tra2a	64	65.803	ENSVPAG00000001829	TRA2A	62	65.803	Vicugna_pacos
ENSCSEG00000012193	tra2a	90	70.696	ENSVVUG00000001045	TRA2A	90	70.696	Vulpes_vulpes
ENSCSEG00000012193	tra2a	64	85.156	ENSXETG00000007397	tra2a	64	71.782	Xenopus_tropicalis