EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000012296 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2625 bases
Position: chrW:9489344-9491968
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000019202	MRP-L28	PF09812.9	3.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000019438	-	507	-	ENSCSEP00000019202	168 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000012296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000012296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000012296	-	93	61.538	ENSCSEG00000019750	mrpl40	80	66.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000012296	-	61	47.826	ENSG00000185608	MRPL40	63	43.077	Homo_sapiens
ENSCSEG00000012296	-	91	46.061	ENSAPOG00000021291	mrpl40	78	49.091	Acanthochromis_polyacanthus
ENSCSEG00000012296	-	67	40.800	ENSAMEG00000011421	MRPL40	63	39.535	Ailuropoda_melanoleuca
ENSCSEG00000012296	-	91	47.273	ENSACIG00000006672	mrpl40	78	50.909	Amphilophus_citrinellus
ENSCSEG00000012296	-	92	48.750	ENSACIG00000006717	MRPL40	72	47.170	Amphilophus_citrinellus
ENSCSEG00000012296	-	91	49.091	ENSAOCG00000003216	mrpl40	78	51.515	Amphiprion_ocellaris
ENSCSEG00000012296	-	91	49.091	ENSAPEG00000017401	mrpl40	78	52.121	Amphiprion_percula
ENSCSEG00000012296	-	53	53.465	ENSATEG00000020753	mrpl40	79	51.111	Anabas_testudineus
ENSCSEG00000012296	-	64	47.899	ENSAPLG00000004002	MRPL40	60	47.899	Anas_platyrhynchos
ENSCSEG00000012296	-	98	35.165	ENSACAG00000001053	MRPL40	90	35.165	Anolis_carolinensis
ENSCSEG00000012296	-	61	46.087	ENSANAG00000026579	MRPL40	63	41.538	Aotus_nancymaae
ENSCSEG00000012296	-	92	48.795	ENSACLG00000011106	mrpl40	78	52.410	Astatotilapia_calliptera
ENSCSEG00000012296	-	93	40.556	ENSAMXG00000029691	mrpl40	82	46.199	Astyanax_mexicanus
ENSCSEG00000012296	-	64	42.017	ENSBTAG00000019891	MRPL40	63	39.231	Bos_taurus
ENSCSEG00000012296	-	61	46.957	ENSCJAG00000001584	MRPL40	63	42.308	Callithrix_jacchus
ENSCSEG00000012296	-	61	46.957	ENSCAFG00020007995	MRPL40	63	42.308	Canis_lupus_dingo
ENSCSEG00000012296	-	61	36.607	ENSCHIG00000026872	-	70	35.043	Capra_hircus
ENSCSEG00000012296	-	67	41.600	ENSCHIG00000000131	-	66	40.000	Capra_hircus
ENSCSEG00000012296	-	62	50.000	ENSTSYG00000014747	MRPL40	64	45.385	Carlito_syrichta
ENSCSEG00000012296	-	61	46.957	ENSCAPG00000012876	MRPL40	80	46.957	Cavia_aperea
ENSCSEG00000012296	-	61	46.957	ENSCPOG00000026802	MRPL40	63	42.308	Cavia_porcellus
ENSCSEG00000012296	-	61	46.957	ENSCCAG00000037694	MRPL40	65	42.308	Cebus_capucinus
ENSCSEG00000012296	-	61	48.696	ENSCATG00000031418	-	63	43.846	Cercocebus_atys
ENSCSEG00000012296	-	61	48.696	ENSCATG00000043592	-	64	43.846	Cercocebus_atys
ENSCSEG00000012296	-	61	46.087	ENSCLAG00000016629	MRPL40	63	41.538	Chinchilla_lanigera
ENSCSEG00000012296	-	61	50.435	ENSCSAG00000011593	MRPL40	63	45.385	Chlorocebus_sabaeus
ENSCSEG00000012296	-	61	42.609	ENSCHOG00000008751	MRPL40	73	38.462	Choloepus_hoffmanni
ENSCSEG00000012296	-	67	39.200	ENSCPBG00000010618	MRPL40	77	39.073	Chrysemys_picta_bellii
ENSCSEG00000012296	-	62	49.138	ENSCANG00000038600	MRPL40	69	44.615	Colobus_angolensis_palliatus
ENSCSEG00000012296	-	67	38.400	ENSCGRG00001019957	Mrpl40	62	37.795	Cricetulus_griseus_chok1gshd
ENSCSEG00000012296	-	67	38.400	ENSCGRG00000001245	Mrpl40	62	37.795	Cricetulus_griseus_crigri
ENSCSEG00000012296	-	90	49.693	ENSCVAG00000018229	mrpl40	79	49.693	Cyprinodon_variegatus
ENSCSEG00000012296	-	86	42.038	ENSDARG00000043554	mrpl40	88	38.764	Danio_rerio
ENSCSEG00000012296	-	61	47.826	ENSDORG00000002949	Mrpl40	62	44.882	Dipodomys_ordii
ENSCSEG00000012296	-	66	35.659	FBgn0037892	mRpL40	68	33.083	Drosophila_melanogaster
ENSCSEG00000012296	-	64	43.697	ENSEASG00005010493	MRPL40	63	40.769	Equus_asinus_asinus
ENSCSEG00000012296	-	62	45.690	ENSECAG00000009876	MRPL40	78	41.538	Equus_caballus
ENSCSEG00000012296	-	67	42.400	ENSEEUG00000009268	MRPL40	62	41.085	Erinaceus_europaeus
ENSCSEG00000012296	-	84	52.941	ENSELUG00000009281	mrpl40	74	52.941	Esox_lucius
ENSCSEG00000012296	-	61	45.217	ENSFCAG00000002752	MRPL40	62	41.732	Felis_catus
ENSCSEG00000012296	-	54	47.573	ENSFALG00000007981	MRPL40	75	41.722	Ficedula_albicollis
ENSCSEG00000012296	-	67	43.200	ENSFDAG00000020940	MRPL40	80	41.538	Fukomys_damarensis
ENSCSEG00000012296	-	92	39.759	ENSGALG00000053063	MRPL40	53	39.759	Gallus_gallus
ENSCSEG00000012296	-	84	51.634	ENSGAFG00000000522	mrpl40	74	50.980	Gambusia_affinis
ENSCSEG00000012296	-	67	38.060	ENSGAGG00000020728	MRPL40	61	45.669	Gopherus_agassizii
ENSCSEG00000012296	-	61	47.826	ENSGGOG00000012336	MRPL40	63	43.077	Gorilla_gorilla
ENSCSEG00000012296	-	92	48.193	ENSHBUG00000000404	mrpl40	78	51.807	Haplochromis_burtoni
ENSCSEG00000012296	-	70	40.769	ENSHGLG00000018525	MRPL40	80	40.769	Heterocephalus_glaber_female
ENSCSEG00000012296	-	67	42.400	ENSHGLG00100009563	MRPL40	63	40.769	Heterocephalus_glaber_male
ENSCSEG00000012296	-	83	50.658	ENSHCOG00000005731	mrpl40	74	50.658	Hippocampus_comes
ENSCSEG00000012296	-	53	49.505	ENSIPUG00000020288	Mrpl40	73	43.590	Ictalurus_punctatus
ENSCSEG00000012296	-	61	46.087	ENSSTOG00000002887	MRPL40	64	41.538	Ictidomys_tridecemlineatus
ENSCSEG00000012296	-	61	46.087	ENSJJAG00000017905	Mrpl40	64	41.538	Jaculus_jaculus
ENSCSEG00000012296	-	90	43.902	ENSKMAG00000003717	mrpl40	77	46.951	Kryptolebias_marmoratus
ENSCSEG00000012296	-	64	52.941	ENSLBEG00000025203	mrpl40	64	57.983	Labrus_bergylta
ENSCSEG00000012296	-	53	46.535	ENSLACG00000015070	MRPL40	75	39.216	Latimeria_chalumnae
ENSCSEG00000012296	-	83	41.060	ENSLOCG00000001879	mrpl40	74	46.405	Lepisosteus_oculatus
ENSCSEG00000012296	-	67	44.000	ENSLAFG00000011061	MRPL40	62	43.307	Loxodonta_africana
ENSCSEG00000012296	-	61	47.826	ENSMFAG00000039890	-	85	39.759	Macaca_fascicularis
ENSCSEG00000012296	-	61	48.696	ENSMFAG00000032018	-	63	43.846	Macaca_fascicularis
ENSCSEG00000012296	-	61	46.957	ENSMFAG00000001495	-	64	42.308	Macaca_fascicularis
ENSCSEG00000012296	-	61	46.957	ENSMMUG00000006218	-	72	42.308	Macaca_mulatta
ENSCSEG00000012296	-	61	46.087	ENSMMUG00000030886	-	63	41.538	Macaca_mulatta
ENSCSEG00000012296	-	61	48.696	ENSMNEG00000034050	-	63	43.846	Macaca_nemestrina
ENSCSEG00000012296	-	61	47.826	ENSMNEG00000041171	-	65	43.077	Macaca_nemestrina
ENSCSEG00000012296	-	89	39.752	ENSMNEG00000040492	-	86	39.752	Macaca_nemestrina
ENSCSEG00000012296	-	61	46.087	ENSMLEG00000009022	-	85	38.554	Mandrillus_leucophaeus
ENSCSEG00000012296	-	67	45.600	ENSMLEG00000032552	-	64	43.846	Mandrillus_leucophaeus
ENSCSEG00000012296	-	62	48.276	ENSMLEG00000030926	-	69	43.846	Mandrillus_leucophaeus
ENSCSEG00000012296	-	88	47.500	ENSMAMG00000014249	mrpl40	77	51.250	Mastacembelus_armatus
ENSCSEG00000012296	-	92	48.795	ENSMZEG00005009853	mrpl40	78	52.410	Maylandia_zebra
ENSCSEG00000012296	-	68	46.825	ENSMGAG00000001177	MRPL40	86	45.113	Meleagris_gallopavo
ENSCSEG00000012296	-	67	40.000	ENSMAUG00000015350	Mrpl40	62	39.370	Mesocricetus_auratus
ENSCSEG00000012296	-	61	44.348	ENSMICG00000046066	MRPL40	63	40.000	Microcebus_murinus
ENSCSEG00000012296	-	62	40.517	ENSMOCG00000016970	Mrpl40	63	36.923	Microtus_ochrogaster
ENSCSEG00000012296	-	53	51.485	ENSMMOG00000012861	mrpl40	71	52.308	Mola_mola
ENSCSEG00000012296	-	53	46.535	ENSMODG00000010070	MRPL40	82	38.816	Monodelphis_domestica
ENSCSEG00000012296	-	87	44.654	ENSMALG00000020778	mrpl40	76	51.266	Monopterus_albus
ENSCSEG00000012296	-	67	40.800	MGP_CAROLIEiJ_G0020557	Mrpl40	80	39.231	Mus_caroli
ENSCSEG00000012296	-	67	40.800	ENSMUSG00000022706	Mrpl40	80	39.231	Mus_musculus
ENSCSEG00000012296	-	67	40.800	MGP_PahariEiJ_G0016262	Mrpl40	80	39.231	Mus_pahari
ENSCSEG00000012296	-	67	40.000	MGP_SPRETEiJ_G0021452	Mrpl40	80	38.462	Mus_spretus
ENSCSEG00000012296	-	61	45.217	ENSMPUG00000003865	MRPL40	63	40.769	Mustela_putorius_furo
ENSCSEG00000012296	-	61	46.957	ENSMLUG00000024620	-	63	42.308	Myotis_lucifugus
ENSCSEG00000012296	-	61	46.957	ENSMLUG00000002456	-	63	42.308	Myotis_lucifugus
ENSCSEG00000012296	-	61	44.348	ENSNGAG00000000304	Mrpl40	64	40.000	Nannospalax_galili
ENSCSEG00000012296	-	61	46.957	ENSNLEG00000005372	MRPL40	63	42.308	Nomascus_leucogenys
ENSCSEG00000012296	-	61	46.957	ENSODEG00000017051	MRPL40	63	42.308	Octodon_degus
ENSCSEG00000012296	-	92	47.590	ENSONIG00000014393	mrpl40	78	51.205	Oreochromis_niloticus
ENSCSEG00000012296	-	84	45.098	ENSORLG00000002574	mrpl40	76	48.734	Oryzias_latipes
ENSCSEG00000012296	-	98	43.646	ENSORLG00020005727	mrpl40	86	45.856	Oryzias_latipes_hni
ENSCSEG00000012296	-	98	44.199	ENSORLG00015015422	mrpl40	86	44.199	Oryzias_latipes_hsok
ENSCSEG00000012296	-	87	45.570	ENSOMEG00000017632	mrpl40	76	49.367	Oryzias_melastigma
ENSCSEG00000012296	-	61	46.087	ENSOGAG00000030071	MRPL40	69	41.538	Otolemur_garnettii
ENSCSEG00000012296	-	64	42.017	ENSOARG00000017561	MRPL40	62	39.231	Ovis_aries
ENSCSEG00000012296	-	62	48.276	ENSPPAG00000030349	MRPL40	63	43.846	Pan_paniscus
ENSCSEG00000012296	-	61	44.348	ENSPPRG00000004672	MRPL40	62	40.945	Panthera_pardus
ENSCSEG00000012296	-	61	44.348	ENSPTIG00000003393	MRPL40	63	40.310	Panthera_tigris_altaica
ENSCSEG00000012296	-	62	48.276	ENSPTRG00000014061	MRPL40	63	43.846	Pan_troglodytes
ENSCSEG00000012296	-	61	48.696	ENSPANG00000000595	-	64	43.846	Papio_anubis
ENSCSEG00000012296	-	61	48.696	ENSPANG00000007370	-	63	43.846	Papio_anubis
ENSCSEG00000012296	-	86	41.667	ENSPKIG00000024494	mrpl40	75	41.667	Paramormyrops_kingsleyae
ENSCSEG00000012296	-	67	46.400	ENSPSIG00000003055	MRPL40	77	45.669	Pelodiscus_sinensis
ENSCSEG00000012296	-	53	50.495	ENSPMGG00000018388	mrpl40	69	48.062	Periophthalmus_magnuspinnatus
ENSCSEG00000012296	-	61	42.609	ENSPEMG00000017933	Mrpl40	62	39.370	Peromyscus_maniculatus_bairdii
ENSCSEG00000012296	-	68	41.270	ENSPCIG00000025479	MRPL40	64	39.695	Phascolarctos_cinereus
ENSCSEG00000012296	-	84	50.000	ENSPFOG00000012506	mrpl40	72	50.000	Poecilia_formosa
ENSCSEG00000012296	-	84	50.327	ENSPLAG00000017335	mrpl40	74	50.327	Poecilia_latipinna
ENSCSEG00000012296	-	84	50.980	ENSPMEG00000003881	mrpl40	74	50.980	Poecilia_mexicana
ENSCSEG00000012296	-	84	49.673	ENSPREG00000011448	mrpl40	74	49.673	Poecilia_reticulata
ENSCSEG00000012296	-	62	48.276	ENSPPYG00000011578	MRPL40	69	43.846	Pongo_abelii
ENSCSEG00000012296	-	58	44.037	ENSPCAG00000007834	MRPL40	50	44.660	Procavia_capensis
ENSCSEG00000012296	-	61	45.217	ENSPCOG00000014413	MRPL40	63	40.769	Propithecus_coquereli
ENSCSEG00000012296	-	92	48.795	ENSPNYG00000008216	mrpl40	78	52.410	Pundamilia_nyererei
ENSCSEG00000012296	-	92	41.860	ENSPNAG00000000310	mrpl40	76	53.390	Pygocentrus_nattereri
ENSCSEG00000012296	-	67	40.000	ENSRNOG00000049686	Mrpl40	62	39.370	Rattus_norvegicus
ENSCSEG00000012296	-	61	49.565	ENSRBIG00000023060	MRPL40	63	44.615	Rhinopithecus_bieti
ENSCSEG00000012296	-	61	49.565	ENSRROG00000043837	MRPL40	63	44.615	Rhinopithecus_roxellana
ENSCSEG00000012296	-	61	42.735	ENSSBOG00000031050	MRPL40	63	41.538	Saimiri_boliviensis_boliviensis
ENSCSEG00000012296	-	68	42.857	ENSSHAG00000010239	MRPL40	81	41.221	Sarcophilus_harrisii
ENSCSEG00000012296	-	84	38.562	ENSSFOG00015014220	mrpl40	79	42.308	Scleropages_formosus
ENSCSEG00000012296	-	93	54.438	ENSSMAG00000006340	mrpl40	80	54.438	Scophthalmus_maximus
ENSCSEG00000012296	-	91	51.515	ENSSDUG00000022994	mrpl40	78	51.515	Seriola_dumerili
ENSCSEG00000012296	-	91	51.515	ENSSLDG00000009671	mrpl40	78	51.515	Seriola_lalandi_dorsalis
ENSCSEG00000012296	-	61	46.087	ENSSARG00000003051	MRPL40	62	42.520	Sorex_araneus
ENSCSEG00000012296	-	61	54.783	ENSSPUG00000015559	MRPL40	75	45.033	Sphenodon_punctatus
ENSCSEG00000012296	-	91	47.879	ENSSPAG00000015481	mrpl40	78	47.879	Stegastes_partitus
ENSCSEG00000012296	-	61	45.217	ENSSSCG00000034014	MRPL40	63	40.769	Sus_scrofa
ENSCSEG00000012296	-	54	47.573	ENSTGUG00000008534	MRPL40	77	49.580	Taeniopygia_guttata
ENSCSEG00000012296	-	91	45.455	ENSTRUG00000025904	mrpl40	79	48.485	Takifugu_rubripes
ENSCSEG00000012296	-	64	41.176	ENSTTRG00000014932	MRPL40	64	38.462	Tursiops_truncatus
ENSCSEG00000012296	-	67	41.600	ENSUAMG00000007667	MRPL40	61	41.600	Ursus_americanus
ENSCSEG00000012296	-	67	41.600	ENSUMAG00000006804	MRPL40	66	41.600	Ursus_maritimus
ENSCSEG00000012296	-	97	30.909	ENSVVUG00000020719	-	69	34.286	Vulpes_vulpes
ENSCSEG00000012296	-	61	46.087	ENSVVUG00000025360	-	63	41.538	Vulpes_vulpes
ENSCSEG00000012296	-	84	42.484	ENSXETG00000018600	mrpl40	75	42.484	Xenopus_tropicalis
ENSCSEG00000012296	-	84	50.980	ENSXCOG00000002135	mrpl40	74	50.980	Xiphophorus_couchianus
ENSCSEG00000012296	-	84	51.634	ENSXMAG00000014595	mrpl40	74	51.634	Xiphophorus_maculatus