EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000012382 (Gene tree)
Gene ID: 103382934
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3134 bases
Position: chr8:26906743-26909876
Accession: 103382934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000019374	tRNA_Me_trans	PF03054.16	4.9e-124	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000019613	-	1212	XM_008315916	ENSCSEP00000019374	403 (aa)	XP_008314138	-

Gene Model

Click here to download ENSCSEG00000012382's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000012382's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000012382	trmu	99	67.633	ENSG00000100416	TRMU	99	75.676	Homo_sapiens
ENSCSEG00000012382	trmu	99	80.769	ENSAPOG00000014458	trmu	99	80.769	Acanthochromis_polyacanthus
ENSCSEG00000012382	trmu	99	67.229	ENSAMEG00000003319	TRMU	99	67.229	Ailuropoda_melanoleuca
ENSCSEG00000012382	trmu	99	78.986	ENSACIG00000002101	trmu	99	78.986	Amphilophus_citrinellus
ENSCSEG00000012382	trmu	99	81.731	ENSAOCG00000013155	trmu	99	81.731	Amphiprion_ocellaris
ENSCSEG00000012382	trmu	99	81.490	ENSAPEG00000013350	trmu	99	81.490	Amphiprion_percula
ENSCSEG00000012382	trmu	99	80.097	ENSATEG00000007814	trmu	100	80.097	Anabas_testudineus
ENSCSEG00000012382	trmu	93	69.767	ENSAPLG00000016380	TRMU	98	69.767	Anas_platyrhynchos
ENSCSEG00000012382	trmu	99	68.780	ENSACAG00000007720	TRMU	98	68.780	Anolis_carolinensis
ENSCSEG00000012382	trmu	99	68.599	ENSANAG00000038053	TRMU	98	68.599	Aotus_nancymaae
ENSCSEG00000012382	trmu	99	80.193	ENSACLG00000005395	trmu	98	81.301	Astatotilapia_calliptera
ENSCSEG00000012382	trmu	99	72.195	ENSAMXG00000005282	trmu	99	72.195	Astyanax_mexicanus
ENSCSEG00000012382	trmu	99	67.391	ENSBTAG00000005595	TRMU	99	67.391	Bos_taurus
ENSCSEG00000012382	trmu	91	38.363	WBGene00007114	mttu-1	98	38.363	Caenorhabditis_elegans
ENSCSEG00000012382	trmu	99	66.908	ENSCJAG00000000198	TRMU	98	66.908	Callithrix_jacchus
ENSCSEG00000012382	trmu	99	67.229	ENSCAFG00000000779	TRMU	98	67.229	Canis_familiaris
ENSCSEG00000012382	trmu	99	67.229	ENSCAFG00020009184	TRMU	98	67.229	Canis_lupus_dingo
ENSCSEG00000012382	trmu	97	67.901	ENSCHIG00000017074	TRMU	97	67.901	Capra_hircus
ENSCSEG00000012382	trmu	97	68.889	ENSTSYG00000003853	TRMU	96	68.889	Carlito_syrichta
ENSCSEG00000012382	trmu	94	64.059	ENSCAPG00000013034	TRMU	96	64.059	Cavia_aperea
ENSCSEG00000012382	trmu	97	68.734	ENSCPOG00000020780	TRMU	96	68.734	Cavia_porcellus
ENSCSEG00000012382	trmu	99	67.312	ENSCCAG00000021641	TRMU	98	67.312	Cebus_capucinus
ENSCSEG00000012382	trmu	96	68.922	ENSCATG00000032800	TRMU	95	68.922	Cercocebus_atys
ENSCSEG00000012382	trmu	100	67.548	ENSCLAG00000017269	TRMU	99	67.548	Chinchilla_lanigera
ENSCSEG00000012382	trmu	98	68.227	ENSCSAG00000005279	TRMU	96	68.227	Chlorocebus_sabaeus
ENSCSEG00000012382	trmu	89	69.355	ENSCPBG00000011621	TRMU	93	69.355	Chrysemys_picta_bellii
ENSCSEG00000012382	trmu	94	45.293	ENSCING00000019371	-	96	45.293	Ciona_intestinalis
ENSCSEG00000012382	trmu	99	67.391	ENSCANG00000041645	TRMU	98	67.391	Colobus_angolensis_palliatus
ENSCSEG00000012382	trmu	99	65.865	ENSCGRG00001001739	Trmu	99	65.865	Cricetulus_griseus_chok1gshd
ENSCSEG00000012382	trmu	99	61.058	ENSCGRG00000002781	Trmu	99	61.058	Cricetulus_griseus_crigri
ENSCSEG00000012382	trmu	99	80.193	ENSCVAG00000001366	trmu	99	80.193	Cyprinodon_variegatus
ENSCSEG00000012382	trmu	99	70.531	ENSDARG00000043734	trmu	99	70.531	Danio_rerio
ENSCSEG00000012382	trmu	61	55.939	ENSDNOG00000047245	-	92	55.939	Dasypus_novemcinctus
ENSCSEG00000012382	trmu	96	68.828	ENSDORG00000007455	Trmu	98	68.828	Dipodomys_ordii
ENSCSEG00000012382	trmu	89	41.555	FBgn0040337	CG3021	95	42.228	Drosophila_melanogaster
ENSCSEG00000012382	trmu	93	52.926	ENSEBUG00000007454	trmu	99	51.884	Eptatretus_burgeri
ENSCSEG00000012382	trmu	97	68.642	ENSEASG00005021725	TRMU	96	68.642	Equus_asinus_asinus
ENSCSEG00000012382	trmu	97	68.642	ENSECAG00000000467	TRMU	96	68.642	Equus_caballus
ENSCSEG00000012382	trmu	68	49.301	ENSEEUG00000000074	-	75	81.481	Erinaceus_europaeus
ENSCSEG00000012382	trmu	98	74.390	ENSELUG00000009464	trmu	99	75.815	Esox_lucius
ENSCSEG00000012382	trmu	96	69.925	ENSFCAG00000006533	TRMU	95	69.925	Felis_catus
ENSCSEG00000012382	trmu	89	70.000	ENSFALG00000010035	TRMU	96	70.000	Ficedula_albicollis
ENSCSEG00000012382	trmu	91	67.105	ENSFDAG00000017472	TRMU	97	67.105	Fukomys_damarensis
ENSCSEG00000012382	trmu	99	80.798	ENSFHEG00000003162	trmu	99	80.798	Fundulus_heteroclitus
ENSCSEG00000012382	trmu	97	69.927	ENSGMOG00000001323	trmu	100	69.927	Gadus_morhua
ENSCSEG00000012382	trmu	98	69.157	ENSGALG00000031922	TRMU	98	69.157	Gallus_gallus
ENSCSEG00000012382	trmu	98	80.929	ENSGAFG00000013331	trmu	98	80.929	Gambusia_affinis
ENSCSEG00000012382	trmu	99	77.197	ENSGACG00000019024	trmu	99	77.197	Gasterosteus_aculeatus
ENSCSEG00000012382	trmu	99	67.633	ENSGGOG00000000203	TRMU	98	67.633	Gorilla_gorilla
ENSCSEG00000012382	trmu	99	79.710	ENSHBUG00000023421	trmu	98	80.759	Haplochromis_burtoni
ENSCSEG00000012382	trmu	97	68.657	ENSHGLG00000009278	TRMU	95	68.657	Heterocephalus_glaber_female
ENSCSEG00000012382	trmu	97	68.657	ENSHGLG00100018863	TRMU	95	68.657	Heterocephalus_glaber_male
ENSCSEG00000012382	trmu	99	79.518	ENSHCOG00000013459	trmu	99	79.518	Hippocampus_comes
ENSCSEG00000012382	trmu	97	75.062	ENSIPUG00000009785	trmu	99	75.062	Ictalurus_punctatus
ENSCSEG00000012382	trmu	99	67.229	ENSSTOG00000010993	TRMU	99	67.229	Ictidomys_tridecemlineatus
ENSCSEG00000012382	trmu	99	65.865	ENSJJAG00000000667	Trmu	99	65.865	Jaculus_jaculus
ENSCSEG00000012382	trmu	99	80.676	ENSKMAG00000008516	trmu	99	80.676	Kryptolebias_marmoratus
ENSCSEG00000012382	trmu	99	79.710	ENSLBEG00000018831	trmu	99	79.710	Labrus_bergylta
ENSCSEG00000012382	trmu	99	71.635	ENSLACG00000013713	TRMU	99	71.635	Latimeria_chalumnae
ENSCSEG00000012382	trmu	99	74.038	ENSLOCG00000016066	trmu	99	74.038	Lepisosteus_oculatus
ENSCSEG00000012382	trmu	97	64.573	ENSLAFG00000005129	TRMU	97	64.573	Loxodonta_africana
ENSCSEG00000012382	trmu	98	68.227	ENSMFAG00000039767	TRMU	96	68.227	Macaca_fascicularis
ENSCSEG00000012382	trmu	98	68.227	ENSMMUG00000000807	TRMU	96	68.227	Macaca_mulatta
ENSCSEG00000012382	trmu	98	68.227	ENSMNEG00000028164	TRMU	96	68.227	Macaca_nemestrina
ENSCSEG00000012382	trmu	96	68.922	ENSMLEG00000033884	TRMU	95	68.922	Mandrillus_leucophaeus
ENSCSEG00000012382	trmu	99	79.952	ENSMAMG00000004717	trmu	99	79.952	Mastacembelus_armatus
ENSCSEG00000012382	trmu	99	80.193	ENSMZEG00005015797	trmu	99	80.193	Maylandia_zebra
ENSCSEG00000012382	trmu	78	67.665	ENSMGAG00000007550	TRMU	98	67.665	Meleagris_gallopavo
ENSCSEG00000012382	trmu	99	65.385	ENSMAUG00000022282	Trmu	99	65.385	Mesocricetus_auratus
ENSCSEG00000012382	trmu	97	68.238	ENSMICG00000029046	TRMU	98	68.238	Microcebus_murinus
ENSCSEG00000012382	trmu	97	66.914	ENSMOCG00000014641	Trmu	97	66.914	Microtus_ochrogaster
ENSCSEG00000012382	trmu	99	76.627	ENSMMOG00000007229	trmu	99	76.627	Mola_mola
ENSCSEG00000012382	trmu	98	64.792	ENSMODG00000007433	TRMU	96	64.792	Monodelphis_domestica
ENSCSEG00000012382	trmu	99	79.710	ENSMALG00000007721	trmu	99	79.710	Monopterus_albus
ENSCSEG00000012382	trmu	99	66.346	MGP_CAROLIEiJ_G0020134	Trmu	83	82.927	Mus_caroli
ENSCSEG00000012382	trmu	99	66.587	ENSMUSG00000022386	Trmu	83	82.927	Mus_musculus
ENSCSEG00000012382	trmu	99	66.346	MGP_PahariEiJ_G0020139	Trmu	83	82.927	Mus_pahari
ENSCSEG00000012382	trmu	99	66.587	MGP_SPRETEiJ_G0021031	Trmu	83	82.927	Mus_spretus
ENSCSEG00000012382	trmu	99	66.988	ENSMPUG00000002523	TRMU	98	66.988	Mustela_putorius_furo
ENSCSEG00000012382	trmu	97	68.642	ENSNGAG00000005132	Trmu	97	68.642	Nannospalax_galili
ENSCSEG00000012382	trmu	99	79.710	ENSNBRG00000022690	trmu	99	80.247	Neolamprologus_brichardi
ENSCSEG00000012382	trmu	99	68.116	ENSNLEG00000015773	TRMU	98	68.116	Nomascus_leucogenys
ENSCSEG00000012382	trmu	78	57.669	ENSMEUG00000000216	TRMU	98	57.669	Notamacropus_eugenii
ENSCSEG00000012382	trmu	99	67.626	ENSODEG00000014745	TRMU	99	67.626	Octodon_degus
ENSCSEG00000012382	trmu	99	79.469	ENSONIG00000009821	trmu	99	79.469	Oreochromis_niloticus
ENSCSEG00000012382	trmu	93	62.660	ENSOANG00000001891	TRMU	99	62.660	Ornithorhynchus_anatinus
ENSCSEG00000012382	trmu	91	67.460	ENSOCUG00000003664	TRMU	95	66.667	Oryctolagus_cuniculus
ENSCSEG00000012382	trmu	99	76.829	ENSORLG00000019015	trmu	99	76.829	Oryzias_latipes
ENSCSEG00000012382	trmu	99	76.829	ENSORLG00020006830	trmu	99	76.829	Oryzias_latipes_hni
ENSCSEG00000012382	trmu	99	76.829	ENSORLG00015003907	trmu	99	76.829	Oryzias_latipes_hsok
ENSCSEG00000012382	trmu	56	77.215	ENSOMEG00000015541	trmu	86	77.215	Oryzias_melastigma
ENSCSEG00000012382	trmu	97	68.642	ENSOGAG00000008096	TRMU	97	68.642	Otolemur_garnettii
ENSCSEG00000012382	trmu	91	66.579	ENSOARG00000019475	TRMU	93	66.579	Ovis_aries
ENSCSEG00000012382	trmu	99	67.391	ENSPPAG00000033944	TRMU	98	67.391	Pan_paniscus
ENSCSEG00000012382	trmu	96	69.424	ENSPPRG00000004197	TRMU	98	67.308	Panthera_pardus
ENSCSEG00000012382	trmu	67	68.085	ENSPTIG00000014122	TRMU	98	70.037	Panthera_tigris_altaica
ENSCSEG00000012382	trmu	99	67.391	ENSPTRG00000014510	TRMU	98	67.391	Pan_troglodytes
ENSCSEG00000012382	trmu	95	69.114	ENSPANG00000023074	TRMU	97	66.301	Papio_anubis
ENSCSEG00000012382	trmu	99	72.439	ENSPKIG00000002849	trmu	99	72.439	Paramormyrops_kingsleyae
ENSCSEG00000012382	trmu	89	69.459	ENSPSIG00000013020	TRMU	97	69.459	Pelodiscus_sinensis
ENSCSEG00000012382	trmu	99	77.831	ENSPMGG00000004083	trmu	100	77.831	Periophthalmus_magnuspinnatus
ENSCSEG00000012382	trmu	99	65.625	ENSPEMG00000014007	Trmu	99	65.625	Peromyscus_maniculatus_bairdii
ENSCSEG00000012382	trmu	96	64.411	ENSPCIG00000009923	TRMU	98	63.636	Phascolarctos_cinereus
ENSCSEG00000012382	trmu	98	76.601	ENSPFOG00000008197	trmu	91	76.601	Poecilia_formosa
ENSCSEG00000012382	trmu	100	79.567	ENSPLAG00000008414	trmu	100	79.567	Poecilia_latipinna
ENSCSEG00000012382	trmu	99	79.518	ENSPMEG00000004326	trmu	99	79.518	Poecilia_mexicana
ENSCSEG00000012382	trmu	100	80.288	ENSPREG00000007980	trmu	100	80.288	Poecilia_reticulata
ENSCSEG00000012382	trmu	99	67.874	ENSPPYG00000011949	TRMU	98	67.874	Pongo_abelii
ENSCSEG00000012382	trmu	90	63.032	ENSPCAG00000013462	TRMU	97	63.032	Procavia_capensis
ENSCSEG00000012382	trmu	97	67.654	ENSPCOG00000016539	TRMU	97	67.654	Propithecus_coquereli
ENSCSEG00000012382	trmu	97	62.963	ENSPVAG00000013202	TRMU	97	62.963	Pteropus_vampyrus
ENSCSEG00000012382	trmu	99	79.710	ENSPNYG00000005629	trmu	99	79.710	Pundamilia_nyererei
ENSCSEG00000012382	trmu	99	72.749	ENSPNAG00000006339	trmu	96	72.749	Pygocentrus_nattereri
ENSCSEG00000012382	trmu	99	66.346	ENSRNOG00000016465	Trmu	99	66.346	Rattus_norvegicus
ENSCSEG00000012382	trmu	98	67.241	ENSRBIG00000038973	TRMU	96	67.241	Rhinopithecus_bieti
ENSCSEG00000012382	trmu	98	67.488	ENSRROG00000004267	TRMU	96	67.488	Rhinopithecus_roxellana
ENSCSEG00000012382	trmu	91	31.172	YDL033C	SLM3	91	31.172	Saccharomyces_cerevisiae
ENSCSEG00000012382	trmu	99	67.711	ENSSBOG00000030184	TRMU	97	67.711	Saimiri_boliviensis_boliviensis
ENSCSEG00000012382	trmu	91	70.079	ENSSFOG00015020664	trmu	100	70.079	Scleropages_formosus
ENSCSEG00000012382	trmu	99	81.687	ENSSMAG00000019450	trmu	99	81.687	Scophthalmus_maximus
ENSCSEG00000012382	trmu	99	83.092	ENSSDUG00000011913	trmu	99	83.092	Seriola_dumerili
ENSCSEG00000012382	trmu	99	82.850	ENSSLDG00000011684	trmu	99	82.850	Seriola_lalandi_dorsalis
ENSCSEG00000012382	trmu	95	64.398	ENSSPUG00000017123	TRMU	93	64.398	Sphenodon_punctatus
ENSCSEG00000012382	trmu	99	78.072	ENSSPAG00000021875	trmu	99	78.072	Stegastes_partitus
ENSCSEG00000012382	trmu	97	67.901	ENSSSCG00000000007	TRMU	99	66.667	Sus_scrofa
ENSCSEG00000012382	trmu	89	70.509	ENSTGUG00000003663	-	100	70.509	Taeniopygia_guttata
ENSCSEG00000012382	trmu	99	80.583	ENSTRUG00000001231	trmu	99	80.583	Takifugu_rubripes
ENSCSEG00000012382	trmu	99	78.282	ENSTNIG00000010484	trmu	99	78.282	Tetraodon_nigroviridis
ENSCSEG00000012382	trmu	71	56.637	ENSTBEG00000011276	-	77	56.637	Tupaia_belangeri
ENSCSEG00000012382	trmu	96	69.925	ENSTTRG00000004160	TRMU	95	69.925	Tursiops_truncatus
ENSCSEG00000012382	trmu	69	71.233	ENSUAMG00000024825	TRMU	97	71.233	Ursus_americanus
ENSCSEG00000012382	trmu	98	59.950	ENSUMAG00000019079	TRMU	97	70.428	Ursus_maritimus
ENSCSEG00000012382	trmu	51	60.274	ENSVPAG00000000685	-	100	60.274	Vicugna_pacos
ENSCSEG00000012382	trmu	99	66.667	ENSVVUG00000024963	TRMU	98	66.667	Vulpes_vulpes
ENSCSEG00000012382	trmu	97	71.429	ENSXETG00000023304	trmu	95	71.429	Xenopus_tropicalis
ENSCSEG00000012382	trmu	100	78.520	ENSXCOG00000015105	trmu	100	78.520	Xiphophorus_couchianus
ENSCSEG00000012382	trmu	100	80.529	ENSXMAG00000006697	trmu	100	80.529	Xiphophorus_maculatus