EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000012430 (Gene tree)
Gene ID: 103397151
Gene Symbol: -
Alias: -
Full Name: rab-like protein 6
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 20966 bases
Position: chrW:9581996-9602961
Accession: 103397151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000019464	MMR_HSR1	PF01926.23	2.1e-07	1	1
ENSCSEP00000019449	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000019688	-	6791	XM_017042637	ENSCSEP00000019449	701 (aa)	XP_016898126	UPI0007DC855A
ENSCSET00000019703	-	2064	-	ENSCSEP00000019464	687 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000012430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000012430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000012430	-	94	89.055	ENSCSEG00000016135	rabl6b	100	81.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000012430	-	100	71.177	ENSACIG00000010721	rabl6b	100	71.042	Amphilophus_citrinellus
ENSCSEG00000012430	-	95	79.377	ENSATEG00000012055	rabl6b	100	71.580	Anabas_testudineus
ENSCSEG00000012430	-	50	36.779	ENSDARG00000077653	rabl6b	98	62.139	Danio_rerio
ENSCSEG00000012430	-	94	62.926	ENSELUG00000004448	rabl6b	90	69.037	Esox_lucius
ENSCSEG00000012430	-	100	68.861	ENSGAFG00000013561	rabl6b	99	73.431	Gambusia_affinis
ENSCSEG00000012430	-	97	74.601	ENSGACG00000005242	rabl6b	100	69.880	Gasterosteus_aculeatus
ENSCSEG00000012430	-	95	77.991	ENSHBUG00000014235	rabl6b	100	71.485	Haplochromis_burtoni
ENSCSEG00000012430	-	95	62.447	ENSIPUG00000019266	rabl6	100	56.298	Ictalurus_punctatus
ENSCSEG00000012430	-	100	69.865	ENSMAMG00000019516	rabl6b	100	69.459	Mastacembelus_armatus
ENSCSEG00000012430	-	67	69.167	ENSMZEG00005003942	rabl6b	99	69.167	Maylandia_zebra
ENSCSEG00000012430	-	67	68.697	ENSMMOG00000009459	rabl6b	92	68.468	Mola_mola
ENSCSEG00000012430	-	96	77.485	ENSMALG00000002029	rabl6b	100	70.596	Monopterus_albus
ENSCSEG00000012430	-	67	69.854	ENSNBRG00000012512	rabl6b	99	69.647	Neolamprologus_brichardi
ENSCSEG00000012430	-	95	75.111	ENSONIG00000010408	rabl6b	100	69.652	Oreochromis_niloticus
ENSCSEG00000012430	-	95	74.817	ENSORLG00020017557	rabl6b	100	69.433	Oryzias_latipes_hni
ENSCSEG00000012430	-	95	74.487	ENSORLG00015007848	rabl6b	90	78.899	Oryzias_latipes_hsok
ENSCSEG00000012430	-	95	73.958	ENSOMEG00000022840	rabl6b	95	73.835	Oryzias_melastigma
ENSCSEG00000012430	-	95	62.482	ENSPKIG00000007459	RABL6	100	57.256	Paramormyrops_kingsleyae
ENSCSEG00000012430	-	96	53.177	ENSPCIG00000023722	RABL6	91	54.225	Phascolarctos_cinereus
ENSCSEG00000012430	-	95	77.400	ENSPFOG00000003250	rabl6b	100	69.525	Poecilia_formosa
ENSCSEG00000012430	-	95	77.253	ENSPLAG00000019562	rabl6b	100	69.657	Poecilia_latipinna
ENSCSEG00000012430	-	95	77.400	ENSPMEG00000020472	rabl6b	100	69.302	Poecilia_mexicana
ENSCSEG00000012430	-	95	77.386	ENSPREG00000014116	rabl6b	93	77.198	Poecilia_reticulata
ENSCSEG00000012430	-	96	57.514	ENSPNAG00000010857	rabl6b	93	60.169	Pygocentrus_nattereri
ENSCSEG00000012430	-	99	60.055	ENSSFOG00015017388	RABL6	100	58.602	Scleropages_formosus
ENSCSEG00000012430	-	99	57.314	ENSSFOG00015013414	-	99	58.681	Scleropages_formosus
ENSCSEG00000012430	-	99	79.830	ENSSMAG00000012543	rabl6b	99	79.119	Scophthalmus_maximus
ENSCSEG00000012430	-	94	81.222	ENSSDUG00000006564	rabl6b	100	74.185	Seriola_dumerili
ENSCSEG00000012430	-	95	79.883	ENSSPAG00000021033	rabl6b	100	73.306	Stegastes_partitus
ENSCSEG00000012430	-	97	71.593	ENSTNIG00000010595	rabl6b	100	68.306	Tetraodon_nigroviridis