EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000012486 (Gene tree)
Gene ID: 103396391
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 4236 bases
Position: chr20:8771001-8775236
Accession: 103396391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000019566	efThoc1	PF11957.8	3.8e-143	1	1
ENSCSEP00000019547	efThoc1	PF11957.8	6.1e-142	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000019785	-	2223	-	ENSCSEP00000019547	628 (aa)	-	-
ENSCSET00000019805	-	2113	XM_008334454	ENSCSEP00000019566	659 (aa)	XP_008332676	UPI000495D9DD

Gene Model

Click here to download ENSCSEG00000012486's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000012486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000012486	thoc1	99	73.151	ENSG00000079134	THOC1	99	77.206	Homo_sapiens
ENSCSEG00000012486	thoc1	99	72.990	ENSAMEG00000006645	THOC1	98	71.537	Ailuropoda_melanoleuca
ENSCSEG00000012486	thoc1	99	85.965	ENSACIG00000019392	thoc1	95	87.055	Amphilophus_citrinellus
ENSCSEG00000012486	thoc1	99	83.280	ENSAOCG00000008391	thoc1	99	83.283	Amphiprion_ocellaris
ENSCSEG00000012486	thoc1	99	89.068	ENSAPEG00000001093	thoc1	99	88.754	Amphiprion_percula
ENSCSEG00000012486	thoc1	99	89.550	ENSATEG00000004783	thoc1	99	89.362	Anabas_testudineus
ENSCSEG00000012486	thoc1	99	72.231	ENSAPLG00000016149	THOC1	98	69.803	Anas_platyrhynchos
ENSCSEG00000012486	thoc1	99	73.034	ENSACAG00000008307	THOC1	96	70.624	Anolis_carolinensis
ENSCSEG00000012486	thoc1	99	72.496	ENSANAG00000033200	THOC1	98	70.934	Aotus_nancymaae
ENSCSEG00000012486	thoc1	99	88.585	ENSACLG00000016836	thoc1	99	88.298	Astatotilapia_calliptera
ENSCSEG00000012486	thoc1	99	75.000	ENSAMXG00000014708	thoc1	97	75.040	Astyanax_mexicanus
ENSCSEG00000012486	thoc1	99	73.473	ENSBTAG00000019215	THOC1	98	71.842	Bos_taurus
ENSCSEG00000012486	thoc1	93	30.909	WBGene00020172	thoc-1	66	35.491	Caenorhabditis_elegans
ENSCSEG00000012486	thoc1	99	73.312	ENSCJAG00000020450	THOC1	98	71.689	Callithrix_jacchus
ENSCSEG00000012486	thoc1	99	72.990	ENSCAFG00000018324	THOC1	98	71.385	Canis_familiaris
ENSCSEG00000012486	thoc1	99	72.990	ENSCAFG00020017894	THOC1	98	71.385	Canis_lupus_dingo
ENSCSEG00000012486	thoc1	99	73.473	ENSCHIG00000015399	THOC1	98	72.699	Capra_hircus
ENSCSEG00000012486	thoc1	99	72.830	ENSTSYG00000010585	THOC1	98	71.385	Carlito_syrichta
ENSCSEG00000012486	thoc1	99	51.030	ENSCAPG00000016270	THOC1	97	51.543	Cavia_aperea
ENSCSEG00000012486	thoc1	99	72.026	ENSCPOG00000000959	THOC1	98	70.472	Cavia_porcellus
ENSCSEG00000012486	thoc1	99	73.312	ENSCCAG00000025766	THOC1	98	71.689	Cebus_capucinus
ENSCSEG00000012486	thoc1	99	71.061	ENSCATG00000028180	THOC1	96	77.168	Cercocebus_atys
ENSCSEG00000012486	thoc1	99	72.347	ENSCLAG00000009117	THOC1	99	71.763	Chinchilla_lanigera
ENSCSEG00000012486	thoc1	99	73.312	ENSCSAG00000017631	THOC1	98	71.689	Chlorocebus_sabaeus
ENSCSEG00000012486	thoc1	83	75.820	ENSCHOG00000010609	THOC1	78	75.820	Choloepus_hoffmanni
ENSCSEG00000012486	thoc1	99	73.473	ENSCPBG00000027558	THOC1	99	71.733	Chrysemys_picta_bellii
ENSCSEG00000012486	thoc1	72	49.676	ENSCING00000007663	-	99	47.686	Ciona_intestinalis
ENSCSEG00000012486	thoc1	98	48.494	ENSCSAVG00000010649	-	100	47.867	Ciona_savignyi
ENSCSEG00000012486	thoc1	99	73.151	ENSCANG00000034265	THOC1	96	77.778	Colobus_angolensis_palliatus
ENSCSEG00000012486	thoc1	99	72.669	ENSCGRG00001016464	Thoc1	98	70.928	Cricetulus_griseus_chok1gshd
ENSCSEG00000012486	thoc1	95	59.866	ENSCGRG00000003390	-	98	58.923	Cricetulus_griseus_crigri
ENSCSEG00000012486	thoc1	99	72.669	ENSCGRG00000010269	-	99	71.763	Cricetulus_griseus_crigri
ENSCSEG00000012486	thoc1	99	88.264	ENSCVAG00000020600	thoc1	99	87.234	Cyprinodon_variegatus
ENSCSEG00000012486	thoc1	99	82.958	ENSDARG00000088246	thoc1	99	80.945	Danio_rerio
ENSCSEG00000012486	thoc1	99	72.786	ENSDNOG00000019217	THOC1	98	71.189	Dasypus_novemcinctus
ENSCSEG00000012486	thoc1	99	68.167	ENSDORG00000008060	Thoc1	98	67.551	Dipodomys_ordii
ENSCSEG00000012486	thoc1	80	41.756	FBgn0037382	Hpr1	74	40.681	Drosophila_melanogaster
ENSCSEG00000012486	thoc1	90	55.143	ENSETEG00000004165	THOC1	98	54.300	Echinops_telfairi
ENSCSEG00000012486	thoc1	98	61.688	ENSEBUG00000005998	thoc1	98	63.072	Eptatretus_burgeri
ENSCSEG00000012486	thoc1	99	73.151	ENSEASG00005002549	THOC1	94	71.537	Equus_asinus_asinus
ENSCSEG00000012486	thoc1	99	73.151	ENSECAG00000009267	THOC1	88	71.537	Equus_caballus
ENSCSEG00000012486	thoc1	80	58.865	ENSEEUG00000012214	-	81	58.865	Erinaceus_europaeus
ENSCSEG00000012486	thoc1	99	86.058	ENSELUG00000023277	thoc1	99	84.418	Esox_lucius
ENSCSEG00000012486	thoc1	99	73.312	ENSFCAG00000022454	THOC1	85	71.689	Felis_catus
ENSCSEG00000012486	thoc1	99	72.045	ENSFALG00000006205	THOC1	99	71.053	Ficedula_albicollis
ENSCSEG00000012486	thoc1	99	72.669	ENSFDAG00000006842	THOC1	99	71.495	Fukomys_damarensis
ENSCSEG00000012486	thoc1	99	88.907	ENSFHEG00000008841	thoc1	99	87.538	Fundulus_heteroclitus
ENSCSEG00000012486	thoc1	99	86.151	ENSGMOG00000011486	thoc1	99	85.084	Gadus_morhua
ENSCSEG00000012486	thoc1	99	72.186	ENSGALG00000014915	THOC1	99	69.670	Gallus_gallus
ENSCSEG00000012486	thoc1	99	87.299	ENSGAFG00000021464	thoc1	99	86.593	Gambusia_affinis
ENSCSEG00000012486	thoc1	99	89.068	ENSGACG00000017361	thoc1	99	88.602	Gasterosteus_aculeatus
ENSCSEG00000012486	thoc1	99	73.794	ENSGAGG00000021230	-	97	72.188	Gopherus_agassizii
ENSCSEG00000012486	thoc1	99	73.312	ENSGGOG00000003013	THOC1	98	71.689	Gorilla_gorilla
ENSCSEG00000012486	thoc1	99	88.907	ENSHBUG00000009096	thoc1	99	88.602	Haplochromis_burtoni
ENSCSEG00000012486	thoc1	75	65.789	ENSHGLG00000009264	-	98	65.789	Heterocephalus_glaber_female
ENSCSEG00000012486	thoc1	99	72.669	ENSHGLG00000003712	-	98	70.928	Heterocephalus_glaber_female
ENSCSEG00000012486	thoc1	99	72.669	ENSHGLG00100003570	THOC1	98	71.081	Heterocephalus_glaber_male
ENSCSEG00000012486	thoc1	73	64.474	ENSHGLG00100002225	-	98	64.474	Heterocephalus_glaber_male
ENSCSEG00000012486	thoc1	92	78.676	ENSIPUG00000005306	thoc1	99	77.757	Ictalurus_punctatus
ENSCSEG00000012486	thoc1	99	72.830	ENSSTOG00000006484	THOC1	98	71.233	Ictidomys_tridecemlineatus
ENSCSEG00000012486	thoc1	52	73.700	ENSJJAG00000014893	-	96	73.392	Jaculus_jaculus
ENSCSEG00000012486	thoc1	99	87.460	ENSKMAG00000003904	thoc1	99	86.778	Kryptolebias_marmoratus
ENSCSEG00000012486	thoc1	99	88.264	ENSLBEG00000020372	thoc1	98	87.234	Labrus_bergylta
ENSCSEG00000012486	thoc1	99	73.633	ENSLACG00000014869	THOC1	99	71.884	Latimeria_chalumnae
ENSCSEG00000012486	thoc1	99	82.080	ENSLOCG00000002097	thoc1	99	80.182	Lepisosteus_oculatus
ENSCSEG00000012486	thoc1	99	72.990	ENSLAFG00000009585	THOC1	98	71.537	Loxodonta_africana
ENSCSEG00000012486	thoc1	99	73.312	ENSMFAG00000041520	THOC1	98	71.689	Macaca_fascicularis
ENSCSEG00000012486	thoc1	99	73.312	ENSMMUG00000004662	THOC1	98	71.689	Macaca_mulatta
ENSCSEG00000012486	thoc1	99	73.312	ENSMNEG00000040177	THOC1	98	71.689	Macaca_nemestrina
ENSCSEG00000012486	thoc1	99	73.312	ENSMLEG00000034201	THOC1	98	71.689	Mandrillus_leucophaeus
ENSCSEG00000012486	thoc1	99	86.356	ENSMAMG00000016747	thoc1	99	86.169	Mastacembelus_armatus
ENSCSEG00000012486	thoc1	99	88.585	ENSMZEG00005024609	thoc1	99	88.298	Maylandia_zebra
ENSCSEG00000012486	thoc1	99	71.680	ENSMGAG00000009811	THOC1	99	70.807	Meleagris_gallopavo
ENSCSEG00000012486	thoc1	99	72.347	ENSMAUG00000010272	Thoc1	98	70.624	Mesocricetus_auratus
ENSCSEG00000012486	thoc1	99	73.151	ENSMICG00000027200	THOC1	98	71.689	Microcebus_murinus
ENSCSEG00000012486	thoc1	99	61.492	ENSMOCG00000014924	-	95	60.731	Microtus_ochrogaster
ENSCSEG00000012486	thoc1	99	71.383	ENSMOCG00000014536	-	85	69.711	Microtus_ochrogaster
ENSCSEG00000012486	thoc1	99	86.795	ENSMMOG00000011772	thoc1	100	87.520	Mola_mola
ENSCSEG00000012486	thoc1	99	71.975	ENSMODG00000021482	THOC1	98	70.437	Monodelphis_domestica
ENSCSEG00000012486	thoc1	99	88.141	ENSMALG00000021872	thoc1	99	87.082	Monopterus_albus
ENSCSEG00000012486	thoc1	99	71.865	MGP_CAROLIEiJ_G0021989	Thoc1	98	70.320	Mus_caroli
ENSCSEG00000012486	thoc1	99	71.865	ENSMUSG00000024287	Thoc1	93	85.000	Mus_musculus
ENSCSEG00000012486	thoc1	99	71.865	MGP_PahariEiJ_G0018726	Thoc1	98	70.320	Mus_pahari
ENSCSEG00000012486	thoc1	99	71.865	MGP_SPRETEiJ_G0022905	Thoc1	98	70.320	Mus_spretus
ENSCSEG00000012486	thoc1	99	72.990	ENSMPUG00000005448	THOC1	98	71.537	Mustela_putorius_furo
ENSCSEG00000012486	thoc1	99	72.186	ENSMLUG00000004090	-	98	70.776	Myotis_lucifugus
ENSCSEG00000012486	thoc1	60	65.414	ENSMLUG00000024912	-	100	65.414	Myotis_lucifugus
ENSCSEG00000012486	thoc1	89	67.140	ENSMLUG00000027965	-	99	65.890	Myotis_lucifugus
ENSCSEG00000012486	thoc1	99	72.830	ENSNGAG00000001401	-	98	71.233	Nannospalax_galili
ENSCSEG00000012486	thoc1	99	56.571	ENSNGAG00000008061	-	98	56.143	Nannospalax_galili
ENSCSEG00000012486	thoc1	99	86.495	ENSNBRG00000005991	thoc1	97	86.293	Neolamprologus_brichardi
ENSCSEG00000012486	thoc1	99	73.312	ENSNLEG00000006835	THOC1	98	71.689	Nomascus_leucogenys
ENSCSEG00000012486	thoc1	81	76.786	ENSMEUG00000009756	THOC1	82	76.017	Notamacropus_eugenii
ENSCSEG00000012486	thoc1	99	58.521	ENSOPRG00000001108	THOC1	98	57.839	Ochotona_princeps
ENSCSEG00000012486	thoc1	99	67.042	ENSODEG00000006623	THOC1	98	65.753	Octodon_degus
ENSCSEG00000012486	thoc1	99	89.068	ENSONIG00000009440	thoc1	98	88.720	Oreochromis_niloticus
ENSCSEG00000012486	thoc1	99	72.990	ENSOCUG00000011601	THOC1	98	71.537	Oryctolagus_cuniculus
ENSCSEG00000012486	thoc1	99	88.907	ENSORLG00000017629	thoc1	99	88.146	Oryzias_latipes
ENSCSEG00000012486	thoc1	99	89.068	ENSORLG00020007567	thoc1	99	88.298	Oryzias_latipes_hni
ENSCSEG00000012486	thoc1	99	88.907	ENSORLG00015007356	thoc1	99	88.146	Oryzias_latipes_hsok
ENSCSEG00000012486	thoc1	99	87.299	ENSOMEG00000008200	thoc1	99	86.626	Oryzias_melastigma
ENSCSEG00000012486	thoc1	99	69.775	ENSOGAG00000000470	THOC1	98	68.493	Otolemur_garnettii
ENSCSEG00000012486	thoc1	99	73.473	ENSOARG00000009238	THOC1	97	72.222	Ovis_aries
ENSCSEG00000012486	thoc1	99	73.312	ENSPPAG00000031812	THOC1	98	71.689	Pan_paniscus
ENSCSEG00000012486	thoc1	99	72.669	ENSPPRG00000023794	THOC1	96	77.168	Panthera_pardus
ENSCSEG00000012486	thoc1	99	72.669	ENSPTIG00000007469	THOC1	96	77.168	Panthera_tigris_altaica
ENSCSEG00000012486	thoc1	99	72.337	ENSPTRG00000009816	THOC1	98	70.783	Pan_troglodytes
ENSCSEG00000012486	thoc1	99	72.364	ENSPANG00000008665	THOC1	98	70.802	Papio_anubis
ENSCSEG00000012486	thoc1	99	84.244	ENSPKIG00000005906	thoc1	99	82.979	Paramormyrops_kingsleyae
ENSCSEG00000012486	thoc1	85	74.302	ENSPSIG00000007691	THOC1	97	74.484	Pelodiscus_sinensis
ENSCSEG00000012486	thoc1	99	84.000	ENSPMGG00000008279	thoc1	95	84.936	Periophthalmus_magnuspinnatus
ENSCSEG00000012486	thoc1	99	72.026	ENSPEMG00000021789	Thoc1	98	70.320	Peromyscus_maniculatus_bairdii
ENSCSEG00000012486	thoc1	78	70.341	ENSPCIG00000026942	THOC1	97	70.505	Phascolarctos_cinereus
ENSCSEG00000012486	thoc1	99	86.977	ENSPFOG00000011673	thoc1	99	85.714	Poecilia_formosa
ENSCSEG00000012486	thoc1	99	87.621	ENSPLAG00000019648	thoc1	99	86.322	Poecilia_latipinna
ENSCSEG00000012486	thoc1	99	87.138	ENSPMEG00000007083	thoc1	99	85.866	Poecilia_mexicana
ENSCSEG00000012486	thoc1	99	87.781	ENSPREG00000006719	thoc1	99	86.322	Poecilia_reticulata
ENSCSEG00000012486	thoc1	72	78.049	ENSPPYG00000009049	-	98	75.926	Pongo_abelii
ENSCSEG00000012486	thoc1	92	73.085	ENSPCAG00000005320	THOC1	91	73.085	Procavia_capensis
ENSCSEG00000012486	thoc1	99	72.347	ENSPCOG00000009234	THOC1	98	70.928	Propithecus_coquereli
ENSCSEG00000012486	thoc1	99	71.222	ENSPVAG00000004007	THOC1	98	69.863	Pteropus_vampyrus
ENSCSEG00000012486	thoc1	99	88.907	ENSPNYG00000019152	thoc1	99	88.602	Pundamilia_nyererei
ENSCSEG00000012486	thoc1	99	83.119	ENSPNAG00000023390	thoc1	99	81.155	Pygocentrus_nattereri
ENSCSEG00000012486	thoc1	85	57.588	ENSRNOG00000015332	Thoc1	96	57.447	Rattus_norvegicus
ENSCSEG00000012486	thoc1	99	72.496	ENSRBIG00000033738	THOC1	99	73.024	Rhinopithecus_bieti
ENSCSEG00000012486	thoc1	99	73.312	ENSRROG00000044988	THOC1	96	77.778	Rhinopithecus_roxellana
ENSCSEG00000012486	thoc1	99	72.990	ENSSBOG00000016556	THOC1	98	71.385	Saimiri_boliviensis_boliviensis
ENSCSEG00000012486	thoc1	99	72.990	ENSSHAG00000014829	THOC1	98	71.385	Sarcophilus_harrisii
ENSCSEG00000012486	thoc1	99	85.531	ENSSFOG00015021527	thoc1	99	83.891	Scleropages_formosus
ENSCSEG00000012486	thoc1	99	89.280	ENSSMAG00000018465	thoc1	99	86.989	Scophthalmus_maximus
ENSCSEG00000012486	thoc1	99	89.550	ENSSDUG00000016810	thoc1	99	89.058	Seriola_dumerili
ENSCSEG00000012486	thoc1	99	89.389	ENSSLDG00000015555	thoc1	99	88.906	Seriola_lalandi_dorsalis
ENSCSEG00000012486	thoc1	86	76.818	ENSSARG00000006910	THOC1	86	71.815	Sorex_araneus
ENSCSEG00000012486	thoc1	99	72.303	ENSSPUG00000007238	THOC1	98	70.840	Sphenodon_punctatus
ENSCSEG00000012486	thoc1	99	85.760	ENSSPAG00000018847	thoc1	99	83.939	Stegastes_partitus
ENSCSEG00000012486	thoc1	99	73.151	ENSSSCG00000025653	THOC1	93	71.537	Sus_scrofa
ENSCSEG00000012486	thoc1	99	72.669	ENSTGUG00000010204	THOC1	99	70.973	Taeniopygia_guttata
ENSCSEG00000012486	thoc1	99	88.746	ENSTRUG00000013518	thoc1	99	87.994	Takifugu_rubripes
ENSCSEG00000012486	thoc1	99	88.585	ENSTNIG00000008473	thoc1	99	87.386	Tetraodon_nigroviridis
ENSCSEG00000012486	thoc1	99	65.595	ENSTBEG00000016920	THOC1	98	64.384	Tupaia_belangeri
ENSCSEG00000012486	thoc1	99	66.720	ENSTTRG00000016664	THOC1	98	65.449	Tursiops_truncatus
ENSCSEG00000012486	thoc1	99	73.151	ENSUAMG00000002527	THOC1	98	71.739	Ursus_americanus
ENSCSEG00000012486	thoc1	99	73.151	ENSUMAG00000019693	THOC1	98	71.689	Ursus_maritimus
ENSCSEG00000012486	thoc1	71	65.574	ENSVPAG00000003726	-	66	65.574	Vicugna_pacos
ENSCSEG00000012486	thoc1	99	72.990	ENSVVUG00000004384	THOC1	98	71.385	Vulpes_vulpes
ENSCSEG00000012486	thoc1	99	71.132	ENSXETG00000003155	thoc1	97	70.287	Xenopus_tropicalis
ENSCSEG00000012486	thoc1	99	81.350	ENSXCOG00000016085	thoc1	89	82.362	Xiphophorus_couchianus
ENSCSEG00000012486	thoc1	99	87.621	ENSXMAG00000002353	thoc1	99	86.474	Xiphophorus_maculatus