EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000012656 (Gene tree)
Gene ID: 103391100
Gene Symbol: -
Alias: -
Full Name: matrin-3-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 7312 bases
Position: chr15:12832072-12839383
Accession: 103391100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000019854	zf-met	PF12874.7	3.9e-06	1	1
ENSCSEP00000019839	zf-met	PF12874.7	4.1e-06	1	1
ENSCSEP00000019829	zf-met	PF12874.7	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000020070	-	3957	XM_008327237	ENSCSEP00000019829	1137 (aa)	XP_008325459	UPI0004952FE8
ENSCSET00000020079	-	3963	-	ENSCSEP00000019839	1139 (aa)	-	-
ENSCSET00000020095	-	3924	-	ENSCSEP00000019854	1126 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000012656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000012656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000012656	-	79	50.082	ENSAPEG00000003827	-	83	44.315	Amphiprion_percula
ENSCSEG00000012656	-	82	71.111	ENSELUG00000022000	-	52	71.111	Esox_lucius
ENSCSEG00000012656	-	54	78.333	ENSKMAG00000007525	-	69	78.333	Kryptolebias_marmoratus
ENSCSEG00000012656	-	83	63.333	ENSORLG00000023325	-	51	46.751	Oryzias_latipes
ENSCSEG00000012656	-	54	65.000	ENSORLG00020009274	-	78	64.615	Oryzias_latipes_hni
ENSCSEG00000012656	-	78	39.825	ENSORLG00015018491	-	56	46.527	Oryzias_latipes_hsok