EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000012682 (Gene tree)
Gene ID: 103391101
Gene Symbol: matr3l1.1
Alias: matr3l|si:bz1d10.2|wu:fb78d04|wu:fc09f04|wu:fe36a04
Full Name: matrin-3-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 12164 bases
Position: chr15:12835920-12848083
Accession: 103391101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000019873	RRM_1	PF00076.22	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000020115	-	8271	XM_008327239	ENSCSEP00000019873	1115 (aa)	XP_008325461	UPI000496D1C5

Gene Model

Click here to download ENSCSEG00000012682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000012682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSG00000015479	MATR3	94	45.763	Homo_sapiens
ENSCSEG00000012682	matr3l1.1	73	46.988	ENSAMEG00000011347	-	77	46.988	Ailuropoda_melanoleuca
ENSCSEG00000012682	matr3l1.1	99	35.359	ENSAPLG00000008118	-	74	38.060	Anas_platyrhynchos
ENSCSEG00000012682	matr3l1.1	90	42.991	ENSACAG00000016233	-	64	42.991	Anolis_carolinensis
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSANAG00000022951	-	97	32.143	Aotus_nancymaae
ENSCSEG00000012682	matr3l1.1	66	57.364	ENSACLG00000015903	matr3l1.1	89	57.364	Astatotilapia_calliptera
ENSCSEG00000012682	matr3l1.1	98	48.418	ENSAMXG00000010685	matr3l1.1	99	44.162	Astyanax_mexicanus
ENSCSEG00000012682	matr3l1.1	99	43.655	ENSAMXG00000010681	matr3l1.1	99	44.854	Astyanax_mexicanus
ENSCSEG00000012682	matr3l1.1	81	36.052	ENSBTAG00000006756	MATR3	76	36.052	Bos_taurus
ENSCSEG00000012682	matr3l1.1	75	46.429	ENSCJAG00000006888	-	99	32.143	Callithrix_jacchus
ENSCSEG00000012682	matr3l1.1	88	41.379	ENSCAFG00000001345	MATR3	89	41.379	Canis_familiaris
ENSCSEG00000012682	matr3l1.1	86	41.000	ENSCAFG00020010504	-	88	41.000	Canis_lupus_dingo
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSCHIG00000025746	-	89	32.143	Capra_hircus
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSTSYG00000011028	-	97	32.143	Carlito_syrichta
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSCPOG00000014076	-	97	32.143	Cavia_porcellus
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSCCAG00000025074	-	97	32.143	Cebus_capucinus
ENSCSEG00000012682	matr3l1.1	62	32.159	ENSCATG00000041304	-	98	32.143	Cercocebus_atys
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSCLAG00000015998	-	89	32.143	Chinchilla_lanigera
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSCSAG00000013075	-	89	32.143	Chlorocebus_sabaeus
ENSCSEG00000012682	matr3l1.1	93	35.648	ENSCPBG00000006303	-	71	39.552	Chrysemys_picta_bellii
ENSCSEG00000012682	matr3l1.1	74	46.429	ENSCANG00000028224	-	100	32.143	Colobus_angolensis_palliatus
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSCGRG00001020227	Matr3	99	32.143	Cricetulus_griseus_chok1gshd
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSCGRG00000011298	Matr3	89	32.143	Cricetulus_griseus_crigri
ENSCSEG00000012682	matr3l1.1	99	51.115	ENSCVAG00000005337	matr3l1.1	99	50.705	Cyprinodon_variegatus
ENSCSEG00000012682	matr3l1.1	86	48.235	ENSDNOG00000037723	-	77	48.235	Dasypus_novemcinctus
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSEASG00005020857	-	89	32.143	Equus_asinus_asinus
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSECAG00000012882	MATR3	89	32.143	Equus_caballus
ENSCSEG00000012682	matr3l1.1	99	47.245	ENSELUG00000021848	matr3l1.1	99	46.872	Esox_lucius
ENSCSEG00000012682	matr3l1.1	77	53.333	ENSELUG00000021651	si:ch211-271b14.1	87	53.333	Esox_lucius
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSFCAG00000021911	-	97	32.143	Felis_catus
ENSCSEG00000012682	matr3l1.1	75	37.398	ENSFALG00000003071	-	73	37.398	Ficedula_albicollis
ENSCSEG00000012682	matr3l1.1	82	32.143	ENSFDAG00000017675	-	97	32.143	Fukomys_damarensis
ENSCSEG00000012682	matr3l1.1	97	36.574	ENSGALG00000002478	MATR3	71	36.765	Gallus_gallus
ENSCSEG00000012682	matr3l1.1	93	36.066	ENSGAGG00000011386	-	71	40.299	Gopherus_agassizii
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSGGOG00000007308	-	99	32.143	Gorilla_gorilla
ENSCSEG00000012682	matr3l1.1	93	32.237	ENSHGLG00000004673	MATR3	97	32.143	Heterocephalus_glaber_female
ENSCSEG00000012682	matr3l1.1	59	32.237	ENSHGLG00100006442	-	99	32.143	Heterocephalus_glaber_male
ENSCSEG00000012682	matr3l1.1	80	50.879	ENSHCOG00000013223	matr3l1.1	99	48.456	Hippocampus_comes
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSSTOG00000014746	-	97	32.143	Ictidomys_tridecemlineatus
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSJJAG00000021710	-	97	32.143	Jaculus_jaculus
ENSCSEG00000012682	matr3l1.1	85	42.424	ENSLACG00000006743	-	91	41.667	Latimeria_chalumnae
ENSCSEG00000012682	matr3l1.1	74	46.429	ENSMFAG00000000634	-	98	32.143	Macaca_fascicularis
ENSCSEG00000012682	matr3l1.1	74	46.429	ENSMMUG00000016741	MATR3	98	32.143	Macaca_mulatta
ENSCSEG00000012682	matr3l1.1	61	36.744	ENSMMUG00000015963	-	98	36.744	Macaca_mulatta
ENSCSEG00000012682	matr3l1.1	69	46.429	ENSMNEG00000042856	-	98	32.143	Macaca_nemestrina
ENSCSEG00000012682	matr3l1.1	69	46.429	ENSMLEG00000041178	-	98	32.143	Mandrillus_leucophaeus
ENSCSEG00000012682	matr3l1.1	83	65.589	ENSMAMG00000013840	matr3l1.1	99	64.056	Mastacembelus_armatus
ENSCSEG00000012682	matr3l1.1	97	37.037	ENSMGAG00000001331	-	71	37.037	Meleagris_gallopavo
ENSCSEG00000012682	matr3l1.1	91	32.143	ENSMAUG00000011647	Matr3	89	32.143	Mesocricetus_auratus
ENSCSEG00000012682	matr3l1.1	61	34.661	ENSMICG00000012438	-	98	32.143	Microcebus_murinus
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSMOCG00000015711	Matr3	97	32.143	Microtus_ochrogaster
ENSCSEG00000012682	matr3l1.1	58	42.453	ENSMODG00000011925	-	83	42.453	Monodelphis_domestica
ENSCSEG00000012682	matr3l1.1	93	32.143	MGP_CAROLIEiJ_G0022108	Matr3	99	32.143	Mus_caroli
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSMUSG00000037236	Matr3	89	32.143	Mus_musculus
ENSCSEG00000012682	matr3l1.1	93	32.143	MGP_PahariEiJ_G0018842	Matr3	99	32.143	Mus_pahari
ENSCSEG00000012682	matr3l1.1	81	32.143	MGP_SPRETEiJ_G0023020	Matr3	99	32.143	Mus_spretus
ENSCSEG00000012682	matr3l1.1	74	47.059	ENSMPUG00000009297	-	80	47.059	Mustela_putorius_furo
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSMLUG00000005798	-	89	32.143	Myotis_lucifugus
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSNGAG00000017452	Matr3	97	32.143	Nannospalax_galili
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSNLEG00000009093	-	99	32.143	Nomascus_leucogenys
ENSCSEG00000012682	matr3l1.1	74	50.820	ENSOPRG00000016511	-	77	50.820	Ochotona_princeps
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSODEG00000003015	-	97	32.143	Octodon_degus
ENSCSEG00000012682	matr3l1.1	93	32.599	ENSOCUG00000026311	MATR3	89	32.143	Oryctolagus_cuniculus
ENSCSEG00000012682	matr3l1.1	70	54.822	ENSORLG00000025674	matr3l1.1	98	55.330	Oryzias_latipes
ENSCSEG00000012682	matr3l1.1	99	57.143	ENSORLG00020009362	matr3l1.1	99	57.360	Oryzias_latipes_hni
ENSCSEG00000012682	matr3l1.1	99	56.937	ENSORLG00015018551	matr3l1.1	99	57.471	Oryzias_latipes_hsok
ENSCSEG00000012682	matr3l1.1	98	55.565	ENSOMEG00000022287	matr3l1.1	99	58.341	Oryzias_melastigma
ENSCSEG00000012682	matr3l1.1	81	32.143	ENSOGAG00000010607	-	89	32.143	Otolemur_garnettii
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSOARG00000016931	-	89	32.143	Ovis_aries
ENSCSEG00000012682	matr3l1.1	62	32.794	ENSPPAG00000026720	-	99	32.579	Pan_paniscus
ENSCSEG00000012682	matr3l1.1	74	46.429	ENSPPAG00000001418	-	97	32.143	Pan_paniscus
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSPPRG00000008004	-	97	32.143	Panthera_pardus
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSPTIG00000010711	-	93	32.143	Panthera_tigris_altaica
ENSCSEG00000012682	matr3l1.1	74	46.429	ENSPTRG00000017294	MATR3	97	32.143	Pan_troglodytes
ENSCSEG00000012682	matr3l1.1	62	32.143	ENSPANG00000032489	-	99	32.143	Papio_anubis
ENSCSEG00000012682	matr3l1.1	74	46.429	ENSPANG00000012018	-	98	32.143	Papio_anubis
ENSCSEG00000012682	matr3l1.1	99	47.064	ENSPKIG00000000333	matr3l1.1	100	47.034	Paramormyrops_kingsleyae
ENSCSEG00000012682	matr3l1.1	90	40.299	ENSPSIG00000014598	-	71	40.299	Pelodiscus_sinensis
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSPEMG00000020679	Matr3	89	32.143	Peromyscus_maniculatus_bairdii
ENSCSEG00000012682	matr3l1.1	74	46.429	ENSPPYG00000015835	-	77	46.429	Pongo_abelii
ENSCSEG00000012682	matr3l1.1	93	32.450	ENSPCOG00000025718	-	97	32.671	Propithecus_coquereli
ENSCSEG00000012682	matr3l1.1	86	48.485	ENSPVAG00000015431	-	77	48.485	Pteropus_vampyrus
ENSCSEG00000012682	matr3l1.1	91	32.143	ENSRNOG00000019875	Matr3	89	32.143	Rattus_norvegicus
ENSCSEG00000012682	matr3l1.1	62	32.143	ENSRBIG00000034713	-	98	32.143	Rhinopithecus_bieti
ENSCSEG00000012682	matr3l1.1	90	32.308	ENSRROG00000043949	-	97	32.143	Rhinopithecus_roxellana
ENSCSEG00000012682	matr3l1.1	71	46.429	ENSRROG00000039415	-	99	32.143	Rhinopithecus_roxellana
ENSCSEG00000012682	matr3l1.1	88	47.826	ENSSBOG00000030159	-	97	32.143	Saimiri_boliviensis_boliviensis
ENSCSEG00000012682	matr3l1.1	58	42.453	ENSSHAG00000010331	-	89	30.952	Sarcophilus_harrisii
ENSCSEG00000012682	matr3l1.1	92	36.444	ENSSPUG00000019236	-	79	43.103	Sphenodon_punctatus
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSSSCG00000014343	-	97	32.143	Sus_scrofa
ENSCSEG00000012682	matr3l1.1	78	36.574	ENSTGUG00000014568	MATR3	74	39.098	Taeniopygia_guttata
ENSCSEG00000012682	matr3l1.1	59	53.604	ENSTRUG00000001692	-	93	53.081	Takifugu_rubripes
ENSCSEG00000012682	matr3l1.1	86	57.277	ENSTNIG00000003166	matr3l1.1	98	57.353	Tetraodon_nigroviridis
ENSCSEG00000012682	matr3l1.1	67	36.052	ENSUAMG00000000097	-	82	35.714	Ursus_americanus
ENSCSEG00000012682	matr3l1.1	93	31.209	ENSUMAG00000015808	-	89	47.059	Ursus_maritimus
ENSCSEG00000012682	matr3l1.1	88	47.059	ENSVPAG00000006337	-	70	47.059	Vicugna_pacos
ENSCSEG00000012682	matr3l1.1	93	32.143	ENSVVUG00000020287	-	97	32.385	Vulpes_vulpes
ENSCSEG00000012682	matr3l1.1	88	42.697	ENSXETG00000003838	matr3	87	39.655	Xenopus_tropicalis
ENSCSEG00000012682	matr3l1.1	50	50.000	ENSXMAG00000014107	-	80	50.939	Xiphophorus_maculatus