EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000012744 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 16964 bases
Position: chr17:6806243-6823206
Accession: 103392930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000019968	Ago_hook	PF10427.9	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000020213	-	5289	XM_008329691	ENSCSEP00000019968	1762 (aa)	XP_008327913	-

Gene Model

Click here to download ENSCSEG00000012744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000012744's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000012744	tnrc6c1	98	46.036	ENSG00000078687	TNRC6C	92	51.452	Homo_sapiens
ENSCSEG00000012744	tnrc6c1	99	80.773	ENSAPOG00000019749	tnrc6c1	99	82.519	Acanthochromis_polyacanthus
ENSCSEG00000012744	tnrc6c1	95	46.974	ENSAMEG00000013756	TNRC6C	52	59.053	Ailuropoda_melanoleuca
ENSCSEG00000012744	tnrc6c1	96	69.972	ENSACIG00000008075	tnrc6c1	99	69.807	Amphilophus_citrinellus
ENSCSEG00000012744	tnrc6c1	95	82.588	ENSAOCG00000023968	tnrc6c1	99	82.647	Amphiprion_ocellaris
ENSCSEG00000012744	tnrc6c1	95	82.529	ENSAPEG00000009020	tnrc6c1	99	82.647	Amphiprion_percula
ENSCSEG00000012744	tnrc6c1	98	47.265	ENSAPLG00000005456	TNRC6C	98	46.360	Anas_platyrhynchos
ENSCSEG00000012744	tnrc6c1	98	47.794	ENSACAG00000016198	TNRC6C	95	47.003	Anolis_carolinensis
ENSCSEG00000012744	tnrc6c1	98	45.811	ENSANAG00000021554	TNRC6C	94	49.487	Aotus_nancymaae
ENSCSEG00000012744	tnrc6c1	64	71.947	ENSACLG00000000424	tnrc6c1	99	70.404	Astatotilapia_calliptera
ENSCSEG00000012744	tnrc6c1	98	46.089	ENSBTAG00000018658	TNRC6C	80	53.472	Bos_taurus
ENSCSEG00000012744	tnrc6c1	98	43.670	ENSCJAG00000019431	TNRC6C	80	52.687	Callithrix_jacchus
ENSCSEG00000012744	tnrc6c1	98	47.494	ENSCAFG00000005224	TNRC6C	97	46.753	Canis_familiaris
ENSCSEG00000012744	tnrc6c1	98	46.468	ENSCAFG00020006661	TNRC6C	100	47.619	Canis_lupus_dingo
ENSCSEG00000012744	tnrc6c1	98	47.435	ENSCHIG00000026004	TNRC6C	94	53.986	Capra_hircus
ENSCSEG00000012744	tnrc6c1	88	49.021	ENSTSYG00000005403	TNRC6C	80	51.666	Carlito_syrichta
ENSCSEG00000012744	tnrc6c1	98	44.641	ENSCAPG00000007307	TNRC6C	97	44.843	Cavia_aperea
ENSCSEG00000012744	tnrc6c1	98	48.526	ENSCPOG00000000467	TNRC6C	99	48.218	Cavia_porcellus
ENSCSEG00000012744	tnrc6c1	98	47.861	ENSCCAG00000030524	TNRC6C	80	52.818	Cebus_capucinus
ENSCSEG00000012744	tnrc6c1	98	45.914	ENSCATG00000033135	TNRC6C	80	53.408	Cercocebus_atys
ENSCSEG00000012744	tnrc6c1	98	49.010	ENSCLAG00000011139	TNRC6C	97	47.994	Chinchilla_lanigera
ENSCSEG00000012744	tnrc6c1	98	47.290	ENSCSAG00000005167	TNRC6C	72	52.071	Chlorocebus_sabaeus
ENSCSEG00000012744	tnrc6c1	60	61.300	ENSCHOG00000000088	TNRC6C	51	61.994	Choloepus_hoffmanni
ENSCSEG00000012744	tnrc6c1	95	48.729	ENSCPBG00000027960	TNRC6C	100	49.027	Chrysemys_picta_bellii
ENSCSEG00000012744	tnrc6c1	98	45.526	ENSCANG00000041771	TNRC6C	80	52.851	Colobus_angolensis_palliatus
ENSCSEG00000012744	tnrc6c1	98	47.508	ENSCGRG00001022686	Tnrc6c	80	50.070	Cricetulus_griseus_chok1gshd
ENSCSEG00000012744	tnrc6c1	98	47.833	ENSCGRG00000018041	Tnrc6c	80	50.070	Cricetulus_griseus_crigri
ENSCSEG00000012744	tnrc6c1	95	72.955	ENSDARG00000076847	tnrc6c1	100	57.981	Danio_rerio
ENSCSEG00000012744	tnrc6c1	98	48.324	ENSDNOG00000003247	TNRC6C	72	53.101	Dasypus_novemcinctus
ENSCSEG00000012744	tnrc6c1	98	46.015	ENSDORG00000004558	Tnrc6c	100	46.315	Dipodomys_ordii
ENSCSEG00000012744	tnrc6c1	83	53.554	ENSETEG00000005527	TNRC6C	82	53.542	Echinops_telfairi
ENSCSEG00000012744	tnrc6c1	88	49.485	ENSEASG00005004799	TNRC6C	100	48.610	Equus_asinus_asinus
ENSCSEG00000012744	tnrc6c1	98	47.815	ENSECAG00000012486	TNRC6C	97	47.538	Equus_caballus
ENSCSEG00000012744	tnrc6c1	89	54.163	ENSEEUG00000010008	TNRC6C	78	53.725	Erinaceus_europaeus
ENSCSEG00000012744	tnrc6c1	99	43.123	ENSFCAG00000028358	TNRC6C	100	47.816	Felis_catus
ENSCSEG00000012744	tnrc6c1	74	51.790	ENSFALG00000000848	TNRC6C	81	51.487	Ficedula_albicollis
ENSCSEG00000012744	tnrc6c1	93	49.676	ENSFDAG00000010368	TNRC6C	78	53.911	Fukomys_damarensis
ENSCSEG00000012744	tnrc6c1	100	74.849	ENSFHEG00000002936	tnrc6c1	99	74.942	Fundulus_heteroclitus
ENSCSEG00000012744	tnrc6c1	95	47.905	ENSGALG00000001725	TNRC6C	100	49.750	Gallus_gallus
ENSCSEG00000012744	tnrc6c1	100	75.594	ENSGAFG00000019019	tnrc6c1	100	77.757	Gambusia_affinis
ENSCSEG00000012744	tnrc6c1	100	70.885	ENSGACG00000012320	tnrc6c1	98	70.617	Gasterosteus_aculeatus
ENSCSEG00000012744	tnrc6c1	95	50.109	ENSGAGG00000022043	TNRC6C	99	48.019	Gopherus_agassizii
ENSCSEG00000012744	tnrc6c1	98	43.923	ENSGGOG00000011304	TNRC6C	93	50.945	Gorilla_gorilla
ENSCSEG00000012744	tnrc6c1	100	75.771	ENSHBUG00000010846	tnrc6c1	100	77.799	Haplochromis_burtoni
ENSCSEG00000012744	tnrc6c1	98	48.779	ENSHGLG00000004809	TNRC6C	97	47.539	Heterocephalus_glaber_female
ENSCSEG00000012744	tnrc6c1	98	45.078	ENSHGLG00100012597	TNRC6C	62	38.828	Heterocephalus_glaber_male
ENSCSEG00000012744	tnrc6c1	100	59.483	ENSIPUG00000000818	tnrc6c1	98	59.328	Ictalurus_punctatus
ENSCSEG00000012744	tnrc6c1	98	45.043	ENSSTOG00000009101	TNRC6C	99	48.112	Ictidomys_tridecemlineatus
ENSCSEG00000012744	tnrc6c1	98	47.355	ENSJJAG00000017055	Tnrc6c	60	37.620	Jaculus_jaculus
ENSCSEG00000012744	tnrc6c1	99	69.804	ENSKMAG00000021023	tnrc6c1	100	71.925	Kryptolebias_marmoratus
ENSCSEG00000012744	tnrc6c1	93	47.118	ENSLACG00000015283	TNRC6C	77	50.793	Latimeria_chalumnae
ENSCSEG00000012744	tnrc6c1	99	73.178	ENSLOCG00000013377	tnrc6c1	93	73.178	Lepisosteus_oculatus
ENSCSEG00000012744	tnrc6c1	98	45.875	ENSLAFG00000011122	TNRC6C	76	52.490	Loxodonta_africana
ENSCSEG00000012744	tnrc6c1	98	45.914	ENSMFAG00000043943	TNRC6C	80	53.408	Macaca_fascicularis
ENSCSEG00000012744	tnrc6c1	98	47.389	ENSMMUG00000011924	TNRC6C	80	53.408	Macaca_mulatta
ENSCSEG00000012744	tnrc6c1	98	46.031	ENSMNEG00000030405	TNRC6C	80	53.408	Macaca_nemestrina
ENSCSEG00000012744	tnrc6c1	98	45.914	ENSMLEG00000033436	TNRC6C	80	53.408	Mandrillus_leucophaeus
ENSCSEG00000012744	tnrc6c1	100	78.674	ENSMAMG00000023613	tnrc6c1	99	80.118	Mastacembelus_armatus
ENSCSEG00000012744	tnrc6c1	100	76.406	ENSMZEG00005010920	tnrc6c1	99	76.684	Maylandia_zebra
ENSCSEG00000012744	tnrc6c1	88	49.002	ENSMAUG00000021618	Tnrc6c	100	46.375	Mesocricetus_auratus
ENSCSEG00000012744	tnrc6c1	98	42.921	ENSMICG00000003952	TNRC6C	100	47.978	Microcebus_murinus
ENSCSEG00000012744	tnrc6c1	98	47.371	ENSMOCG00000015879	Tnrc6c	77	52.822	Microtus_ochrogaster
ENSCSEG00000012744	tnrc6c1	90	78.837	ENSMMOG00000005203	tnrc6c1	100	78.899	Mola_mola
ENSCSEG00000012744	tnrc6c1	98	47.020	ENSMODG00000001785	TNRC6C	61	38.389	Monodelphis_domestica
ENSCSEG00000012744	tnrc6c1	98	47.419	MGP_CAROLIEiJ_G0017465	Tnrc6c	77	52.617	Mus_caroli
ENSCSEG00000012744	tnrc6c1	98	47.672	ENSMUSG00000025571	Tnrc6c	77	52.617	Mus_musculus
ENSCSEG00000012744	tnrc6c1	98	47.723	MGP_PahariEiJ_G0018593	Tnrc6c	99	47.113	Mus_pahari
ENSCSEG00000012744	tnrc6c1	98	47.520	MGP_SPRETEiJ_G0018309	Tnrc6c	77	52.408	Mus_spretus
ENSCSEG00000012744	tnrc6c1	98	46.680	ENSMPUG00000013348	TNRC6C	71	51.357	Mustela_putorius_furo
ENSCSEG00000012744	tnrc6c1	98	45.711	ENSMLUG00000014431	TNRC6C	96	45.387	Myotis_lucifugus
ENSCSEG00000012744	tnrc6c1	95	77.928	ENSNBRG00000005344	tnrc6c1	99	78.542	Neolamprologus_brichardi
ENSCSEG00000012744	tnrc6c1	89	45.582	ENSMEUG00000005104	TNRC6C	99	45.098	Notamacropus_eugenii
ENSCSEG00000012744	tnrc6c1	90	49.583	ENSODEG00000012499	TNRC6C	100	48.920	Octodon_degus
ENSCSEG00000012744	tnrc6c1	90	77.743	ENSONIG00000002210	tnrc6c1	100	78.580	Oreochromis_niloticus
ENSCSEG00000012744	tnrc6c1	95	73.690	ENSORLG00000009837	tnrc6c1	100	80.292	Oryzias_latipes
ENSCSEG00000012744	tnrc6c1	95	71.765	ENSORLG00020016510	tnrc6c1	100	74.053	Oryzias_latipes_hni
ENSCSEG00000012744	tnrc6c1	76	70.288	ENSORLG00015000171	tnrc6c1	98	71.067	Oryzias_latipes_hsok
ENSCSEG00000012744	tnrc6c1	95	74.383	ENSOMEG00000000357	tnrc6c1	99	74.457	Oryzias_melastigma
ENSCSEG00000012744	tnrc6c1	90	46.931	ENSOGAG00000007197	TNRC6C	80	50.612	Otolemur_garnettii
ENSCSEG00000012744	tnrc6c1	95	45.789	ENSOARG00000006041	TNRC6C	70	51.096	Ovis_aries
ENSCSEG00000012744	tnrc6c1	98	45.887	ENSPPAG00000027160	TNRC6C	93	51.182	Pan_paniscus
ENSCSEG00000012744	tnrc6c1	99	43.395	ENSPPRG00000018881	TNRC6C	100	47.872	Panthera_pardus
ENSCSEG00000012744	tnrc6c1	85	55.819	ENSPTIG00000008791	TNRC6C	85	55.648	Panthera_tigris_altaica
ENSCSEG00000012744	tnrc6c1	98	45.937	ENSPTRG00000009699	TNRC6C	93	51.249	Pan_troglodytes
ENSCSEG00000012744	tnrc6c1	98	45.914	ENSPANG00000019994	TNRC6C	80	53.519	Papio_anubis
ENSCSEG00000012744	tnrc6c1	90	55.709	ENSPKIG00000005428	tnrc6c1	100	56.462	Paramormyrops_kingsleyae
ENSCSEG00000012744	tnrc6c1	93	48.732	ENSPSIG00000018069	TNRC6C	99	48.114	Pelodiscus_sinensis
ENSCSEG00000012744	tnrc6c1	85	72.148	ENSPMGG00000022911	tnrc6c1	97	79.675	Periophthalmus_magnuspinnatus
ENSCSEG00000012744	tnrc6c1	98	47.784	ENSPEMG00000009785	Tnrc6c	100	44.432	Peromyscus_maniculatus_bairdii
ENSCSEG00000012744	tnrc6c1	100	75.493	ENSPFOG00000012560	tnrc6c1	98	75.616	Poecilia_formosa
ENSCSEG00000012744	tnrc6c1	90	78.144	ENSPLAG00000021055	tnrc6c1	100	78.034	Poecilia_latipinna
ENSCSEG00000012744	tnrc6c1	98	47.313	ENSPPYG00000008679	TNRC6C	71	51.495	Pongo_abelii
ENSCSEG00000012744	tnrc6c1	82	65.541	ENSPCAG00000012510	TNRC6C	89	65.541	Procavia_capensis
ENSCSEG00000012744	tnrc6c1	90	48.614	ENSPCOG00000021451	TNRC6C	100	48.033	Propithecus_coquereli
ENSCSEG00000012744	tnrc6c1	67	60.000	ENSPVAG00000002008	TNRC6C	73	60.000	Pteropus_vampyrus
ENSCSEG00000012744	tnrc6c1	95	76.369	ENSPNYG00000014477	tnrc6c1	100	77.592	Pundamilia_nyererei
ENSCSEG00000012744	tnrc6c1	88	49.114	ENSRNOG00000022395	Tnrc6c	80	52.547	Rattus_norvegicus
ENSCSEG00000012744	tnrc6c1	98	45.815	ENSRBIG00000027777	TNRC6C	80	52.990	Rhinopithecus_bieti
ENSCSEG00000012744	tnrc6c1	98	45.815	ENSRROG00000042912	TNRC6C	80	52.990	Rhinopithecus_roxellana
ENSCSEG00000012744	tnrc6c1	98	44.026	ENSSBOG00000023981	TNRC6C	94	49.522	Saimiri_boliviensis_boliviensis
ENSCSEG00000012744	tnrc6c1	100	58.974	ENSSFOG00015006475	tnrc6c1	98	59.108	Scleropages_formosus
ENSCSEG00000012744	tnrc6c1	80	61.752	ENSSFOG00015004735	-	99	63.613	Scleropages_formosus
ENSCSEG00000012744	tnrc6c1	95	82.097	ENSSMAG00000012761	tnrc6c1	100	82.130	Scophthalmus_maximus
ENSCSEG00000012744	tnrc6c1	96	83.873	ENSSDUG00000002366	tnrc6c1	99	83.991	Seriola_dumerili
ENSCSEG00000012744	tnrc6c1	90	84.654	ENSSLDG00000025613	tnrc6c1	100	84.591	Seriola_lalandi_dorsalis
ENSCSEG00000012744	tnrc6c1	62	60.331	ENSSARG00000006816	TNRC6C	91	60.833	Sorex_araneus
ENSCSEG00000012744	tnrc6c1	98	79.944	ENSSPAG00000014977	tnrc6c1	98	81.591	Stegastes_partitus
ENSCSEG00000012744	tnrc6c1	80	61.512	ENSSSCG00000034373	TNRC6C	80	53.097	Sus_scrofa
ENSCSEG00000012744	tnrc6c1	74	54.149	ENSTGUG00000007733	TNRC6C	99	48.230	Taeniopygia_guttata
ENSCSEG00000012744	tnrc6c1	95	75.399	ENSTRUG00000011685	tnrc6c1	98	76.404	Takifugu_rubripes
ENSCSEG00000012744	tnrc6c1	95	70.632	ENSTNIG00000005273	tnrc6c1	100	72.850	Tetraodon_nigroviridis
ENSCSEG00000012744	tnrc6c1	62	48.617	ENSTBEG00000005046	TNRC6C	100	48.684	Tupaia_belangeri
ENSCSEG00000012744	tnrc6c1	93	48.624	ENSTTRG00000010828	TNRC6C	94	53.088	Tursiops_truncatus
ENSCSEG00000012744	tnrc6c1	98	47.211	ENSUMAG00000013614	TNRC6C	98	46.119	Ursus_maritimus
ENSCSEG00000012744	tnrc6c1	88	49.942	ENSVVUG00000015268	TNRC6C	100	48.605	Vulpes_vulpes
ENSCSEG00000012744	tnrc6c1	90	48.691	ENSXETG00000019470	tnrc6c	99	47.611	Xenopus_tropicalis
ENSCSEG00000012744	tnrc6c1	100	75.635	ENSXMAG00000025971	tnrc6c1	100	77.632	Xiphophorus_maculatus