EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000012798 (Gene tree)
Gene ID: 103394160
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 117-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 4783 bases
Position: chr18:5451022-5455804
Accession: 103394160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000020038	zf-C2H2	PF00096.26	5.1e-13	1	1
ENSCSEP00000020038	zf-met	PF12874.7	0.00037	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000020286	-	4118	XM_008331347	ENSCSEP00000020038	280 (aa)	XP_008329569	UPI000495BA67

Gene Model

Click here to download ENSCSEG00000012798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000012798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000012798	-	75	37.662	ENSCSEG00000020730	-	61	37.662
ENSCSEG00000012798	-	50	33.621	ENSCSEG00000020696	-	52	32.520
ENSCSEG00000012798	-	50	33.028	ENSCSEG00000000356	znf648	63	33.028
ENSCSEG00000012798	-	57	35.652	ENSCSEG00000019047	-	63	36.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000012798	-	99	38.857	ENSAMXG00000038507	-	85	38.857	Astyanax_mexicanus
ENSCSEG00000012798	-	98	33.247	ENSELUG00000020907	-	84	34.456	Esox_lucius
ENSCSEG00000012798	-	99	44.912	ENSELUG00000009258	-	79	44.912	Esox_lucius
ENSCSEG00000012798	-	90	38.782	ENSFHEG00000005807	-	83	37.135	Fundulus_heteroclitus
ENSCSEG00000012798	-	88	39.803	ENSGAFG00000003348	-	72	39.803	Gambusia_affinis
ENSCSEG00000012798	-	97	37.278	ENSIPUG00000002513	-	82	36.982	Ictalurus_punctatus
ENSCSEG00000012798	-	88	40.532	ENSKMAG00000014028	-	77	38.953	Kryptolebias_marmoratus
ENSCSEG00000012798	-	98	35.429	ENSMMOG00000009859	-	84	36.571	Mola_mola
ENSCSEG00000012798	-	98	36.963	ENSORLG00000023072	-	83	36.752	Oryzias_latipes
ENSCSEG00000012798	-	98	37.069	ENSORLG00020002684	-	83	37.069	Oryzias_latipes_hni
ENSCSEG00000012798	-	98	36.494	ENSORLG00015018897	-	83	36.494	Oryzias_latipes_hsok
ENSCSEG00000012798	-	98	36.127	ENSOMEG00000010520	-	79	36.207	Oryzias_melastigma
ENSCSEG00000012798	-	88	39.869	ENSPLAG00000005849	-	72	40.397	Poecilia_latipinna
ENSCSEG00000012798	-	88	38.614	ENSPMEG00000020957	-	72	40.594	Poecilia_mexicana
ENSCSEG00000012798	-	88	39.474	ENSPREG00000007939	-	72	39.474	Poecilia_reticulata
ENSCSEG00000012798	-	99	40.173	ENSPNAG00000003839	-	84	40.751	Pygocentrus_nattereri
ENSCSEG00000012798	-	92	39.934	ENSSFOG00015019679	-	75	41.254	Scleropages_formosus
ENSCSEG00000012798	-	89	38.889	ENSXCOG00000015432	-	73	41.042	Xiphophorus_couchianus
ENSCSEG00000012798	-	89	38.889	ENSXMAG00000029995	-	65	41.042	Xiphophorus_maculatus