EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000012996 (Gene tree)
Gene ID: 103380449
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 5684 bases
Position: chr6:16682960-16688643
Accession: 103380449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000020377	FDF	PF09532.10	8e-12	1	1
ENSCSEP00000020377	LSM14	PF12701.7	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000020630	-	4426	XM_008312445	ENSCSEP00000020377	478 (aa)	XP_008310667	UPI00049655A6

Gene Model

Click here to download ENSCSEG00000012996's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000012996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000012996	edc3	99	69.685	ENSG00000179151	EDC3	100	81.481	Homo_sapiens
ENSCSEG00000012996	edc3	99	92.662	ENSAPOG00000010791	edc3	99	92.662	Acanthochromis_polyacanthus
ENSCSEG00000012996	edc3	99	59.592	ENSAPOG00000008655	EDC3	99	59.388	Acanthochromis_polyacanthus
ENSCSEG00000012996	edc3	99	69.685	ENSAMEG00000008963	EDC3	99	69.685	Ailuropoda_melanoleuca
ENSCSEG00000012996	edc3	99	66.064	ENSACIG00000005330	EDC3	99	66.064	Amphilophus_citrinellus
ENSCSEG00000012996	edc3	99	91.405	ENSACIG00000017751	edc3	99	91.405	Amphilophus_citrinellus
ENSCSEG00000012996	edc3	99	65.975	ENSAOCG00000009103	-	99	65.975	Amphiprion_ocellaris
ENSCSEG00000012996	edc3	99	92.872	ENSAOCG00000005431	edc3	99	92.872	Amphiprion_ocellaris
ENSCSEG00000012996	edc3	99	92.872	ENSAPEG00000000968	edc3	99	92.872	Amphiprion_percula
ENSCSEG00000012996	edc3	99	65.975	ENSAPEG00000007841	EDC3	99	65.975	Amphiprion_percula
ENSCSEG00000012996	edc3	99	66.460	ENSATEG00000004205	-	99	66.460	Anabas_testudineus
ENSCSEG00000012996	edc3	99	92.243	ENSATEG00000015505	edc3	99	92.243	Anabas_testudineus
ENSCSEG00000012996	edc3	89	69.757	ENSAPLG00000008957	EDC3	99	69.316	Anas_platyrhynchos
ENSCSEG00000012996	edc3	77	68.434	ENSACAG00000000460	-	100	68.182	Anolis_carolinensis
ENSCSEG00000012996	edc3	99	69.882	ENSANAG00000024078	EDC3	99	69.882	Aotus_nancymaae
ENSCSEG00000012996	edc3	99	67.152	ENSACLG00000018776	-	99	67.152	Astatotilapia_calliptera
ENSCSEG00000012996	edc3	99	91.614	ENSACLG00000007232	edc3	99	91.614	Astatotilapia_calliptera
ENSCSEG00000012996	edc3	99	79.324	ENSAMXG00000001589	edc3	99	79.324	Astyanax_mexicanus
ENSCSEG00000012996	edc3	99	69.291	ENSBTAG00000007308	EDC3	99	69.291	Bos_taurus
ENSCSEG00000012996	edc3	99	69.685	ENSCJAG00000017681	EDC3	99	69.685	Callithrix_jacchus
ENSCSEG00000012996	edc3	99	69.488	ENSCAFG00000017935	EDC3	99	69.488	Canis_familiaris
ENSCSEG00000012996	edc3	99	69.488	ENSCAFG00020003909	EDC3	99	69.488	Canis_lupus_dingo
ENSCSEG00000012996	edc3	99	69.488	ENSCHIG00000023658	EDC3	99	69.488	Capra_hircus
ENSCSEG00000012996	edc3	99	70.079	ENSTSYG00000004822	EDC3	99	70.079	Carlito_syrichta
ENSCSEG00000012996	edc3	99	69.882	ENSCPOG00000015595	EDC3	99	69.882	Cavia_porcellus
ENSCSEG00000012996	edc3	99	69.488	ENSCCAG00000021663	EDC3	99	69.488	Cebus_capucinus
ENSCSEG00000012996	edc3	99	69.488	ENSCATG00000037511	EDC3	99	69.488	Cercocebus_atys
ENSCSEG00000012996	edc3	99	69.685	ENSCLAG00000005700	EDC3	99	69.685	Chinchilla_lanigera
ENSCSEG00000012996	edc3	99	69.488	ENSCSAG00000014239	EDC3	99	69.488	Chlorocebus_sabaeus
ENSCSEG00000012996	edc3	99	70.669	ENSCPBG00000024239	EDC3	99	70.669	Chrysemys_picta_bellii
ENSCSEG00000012996	edc3	99	39.448	ENSCING00000022142	-	99	39.448	Ciona_intestinalis
ENSCSEG00000012996	edc3	99	69.488	ENSCANG00000028699	EDC3	99	69.488	Colobus_angolensis_palliatus
ENSCSEG00000012996	edc3	99	69.488	ENSCGRG00001013874	Edc3	99	69.488	Cricetulus_griseus_chok1gshd
ENSCSEG00000012996	edc3	99	69.488	ENSCGRG00000011885	Edc3	99	69.488	Cricetulus_griseus_crigri
ENSCSEG00000012996	edc3	99	88.679	ENSCVAG00000008023	edc3	99	88.679	Cyprinodon_variegatus
ENSCSEG00000012996	edc3	99	76.238	ENSDARG00000051931	edc3	99	76.238	Danio_rerio
ENSCSEG00000012996	edc3	99	60.895	ENSDNOG00000030661	EDC3	99	60.971	Dasypus_novemcinctus
ENSCSEG00000012996	edc3	68	81.481	ENSETEG00000002398	-	64	81.481	Echinops_telfairi
ENSCSEG00000012996	edc3	99	69.291	ENSEASG00005005071	EDC3	99	69.291	Equus_asinus_asinus
ENSCSEG00000012996	edc3	99	69.291	ENSECAG00000017994	EDC3	99	69.291	Equus_caballus
ENSCSEG00000012996	edc3	99	81.159	ENSELUG00000005794	edc3	99	81.159	Esox_lucius
ENSCSEG00000012996	edc3	99	70.564	ENSELUG00000007607	EDC3	99	70.564	Esox_lucius
ENSCSEG00000012996	edc3	99	69.488	ENSFCAG00000002014	EDC3	99	69.488	Felis_catus
ENSCSEG00000012996	edc3	98	69.277	ENSFALG00000004543	EDC3	96	69.277	Ficedula_albicollis
ENSCSEG00000012996	edc3	99	69.882	ENSFDAG00000012582	EDC3	99	69.882	Fukomys_damarensis
ENSCSEG00000012996	edc3	99	89.937	ENSFHEG00000009375	edc3	99	89.937	Fundulus_heteroclitus
ENSCSEG00000012996	edc3	99	85.000	ENSGMOG00000002715	edc3	99	85.000	Gadus_morhua
ENSCSEG00000012996	edc3	99	70.751	ENSGALG00000040181	EDC3	99	70.751	Gallus_gallus
ENSCSEG00000012996	edc3	99	88.889	ENSGAFG00000014433	edc3	99	88.889	Gambusia_affinis
ENSCSEG00000012996	edc3	100	61.133	ENSGACG00000014671	EDC3	100	61.133	Gasterosteus_aculeatus
ENSCSEG00000012996	edc3	99	88.679	ENSGACG00000009783	edc3	99	88.679	Gasterosteus_aculeatus
ENSCSEG00000012996	edc3	99	71.146	ENSGAGG00000023477	EDC3	99	71.146	Gopherus_agassizii
ENSCSEG00000012996	edc3	99	69.685	ENSGGOG00000003552	EDC3	99	69.685	Gorilla_gorilla
ENSCSEG00000012996	edc3	99	67.360	ENSHBUG00000020817	EDC3	99	67.360	Haplochromis_burtoni
ENSCSEG00000012996	edc3	99	91.614	ENSHBUG00000003635	edc3	99	91.614	Haplochromis_burtoni
ENSCSEG00000012996	edc3	99	86.848	ENSHCOG00000016834	edc3	99	86.848	Hippocampus_comes
ENSCSEG00000012996	edc3	99	78.916	ENSIPUG00000005695	edc3	100	78.916	Ictalurus_punctatus
ENSCSEG00000012996	edc3	99	69.488	ENSSTOG00000013936	EDC3	99	69.488	Ictidomys_tridecemlineatus
ENSCSEG00000012996	edc3	99	69.488	ENSJJAG00000008074	Edc3	99	69.488	Jaculus_jaculus
ENSCSEG00000012996	edc3	99	65.208	ENSKMAG00000001987	EDC3	99	65.208	Kryptolebias_marmoratus
ENSCSEG00000012996	edc3	99	89.540	ENSKMAG00000001243	edc3	99	89.958	Kryptolebias_marmoratus
ENSCSEG00000012996	edc3	99	65.567	ENSLBEG00000017984	EDC3	99	65.567	Labrus_bergylta
ENSCSEG00000012996	edc3	99	90.566	ENSLBEG00000013435	edc3	99	90.566	Labrus_bergylta
ENSCSEG00000012996	edc3	99	70.760	ENSLACG00000014149	EDC3	99	70.760	Latimeria_chalumnae
ENSCSEG00000012996	edc3	99	72.874	ENSLOCG00000014625	edc3	99	73.077	Lepisosteus_oculatus
ENSCSEG00000012996	edc3	99	69.625	ENSLAFG00000002992	EDC3	99	69.625	Loxodonta_africana
ENSCSEG00000012996	edc3	99	69.685	ENSMFAG00000043074	EDC3	99	69.685	Macaca_fascicularis
ENSCSEG00000012996	edc3	99	69.685	ENSMMUG00000011071	EDC3	99	69.685	Macaca_mulatta
ENSCSEG00000012996	edc3	99	69.685	ENSMNEG00000035316	EDC3	99	69.685	Macaca_nemestrina
ENSCSEG00000012996	edc3	99	69.488	ENSMLEG00000030372	EDC3	99	69.488	Mandrillus_leucophaeus
ENSCSEG00000012996	edc3	99	91.614	ENSMAMG00000000505	edc3	99	91.614	Mastacembelus_armatus
ENSCSEG00000012996	edc3	99	65.696	ENSMAMG00000005423	-	99	65.696	Mastacembelus_armatus
ENSCSEG00000012996	edc3	99	66.667	ENSMZEG00005005654	EDC3	99	66.667	Maylandia_zebra
ENSCSEG00000012996	edc3	99	91.405	ENSMZEG00005004892	edc3	99	91.405	Maylandia_zebra
ENSCSEG00000012996	edc3	99	70.553	ENSMGAG00000002617	EDC3	99	70.553	Meleagris_gallopavo
ENSCSEG00000012996	edc3	99	69.488	ENSMICG00000043190	EDC3	99	69.488	Microcebus_murinus
ENSCSEG00000012996	edc3	99	69.094	ENSMOCG00000016205	Edc3	99	69.094	Microtus_ochrogaster
ENSCSEG00000012996	edc3	100	91.841	ENSMMOG00000012278	edc3	100	91.841	Mola_mola
ENSCSEG00000012996	edc3	99	69.685	ENSMODG00000009442	EDC3	99	69.685	Monodelphis_domestica
ENSCSEG00000012996	edc3	99	91.405	ENSMALG00000008658	edc3	99	91.405	Monopterus_albus
ENSCSEG00000012996	edc3	99	68.701	MGP_CAROLIEiJ_G0032280	Edc3	100	80.000	Mus_caroli
ENSCSEG00000012996	edc3	99	68.701	ENSMUSG00000038957	Edc3	100	80.000	Mus_musculus
ENSCSEG00000012996	edc3	99	68.701	MGP_PahariEiJ_G0015146	Edc3	100	80.000	Mus_pahari
ENSCSEG00000012996	edc3	99	69.291	MGP_SPRETEiJ_G0033420	Edc3	100	80.000	Mus_spretus
ENSCSEG00000012996	edc3	99	69.685	ENSMPUG00000017293	EDC3	99	69.685	Mustela_putorius_furo
ENSCSEG00000012996	edc3	99	69.608	ENSMLUG00000016382	EDC3	99	69.608	Myotis_lucifugus
ENSCSEG00000012996	edc3	99	68.898	ENSNGAG00000010923	Edc3	99	68.898	Nannospalax_galili
ENSCSEG00000012996	edc3	99	91.405	ENSNBRG00000002434	edc3	99	91.405	Neolamprologus_brichardi
ENSCSEG00000012996	edc3	99	67.427	ENSNBRG00000007881	EDC3	99	67.427	Neolamprologus_brichardi
ENSCSEG00000012996	edc3	99	60.630	ENSNLEG00000014577	EDC3	99	60.630	Nomascus_leucogenys
ENSCSEG00000012996	edc3	99	69.763	ENSMEUG00000009077	EDC3	99	69.763	Notamacropus_eugenii
ENSCSEG00000012996	edc3	84	81.481	ENSOPRG00000009540	-	78	81.481	Ochotona_princeps
ENSCSEG00000012996	edc3	99	63.301	ENSONIG00000002932	-	99	63.301	Oreochromis_niloticus
ENSCSEG00000012996	edc3	99	91.824	ENSONIG00000008434	edc3	99	91.824	Oreochromis_niloticus
ENSCSEG00000012996	edc3	77	66.751	ENSOCUG00000017740	EDC3	86	66.751	Oryctolagus_cuniculus
ENSCSEG00000012996	edc3	99	64.523	ENSORLG00000014399	-	98	64.523	Oryzias_latipes
ENSCSEG00000012996	edc3	99	85.983	ENSORLG00000004883	edc3	99	85.983	Oryzias_latipes
ENSCSEG00000012996	edc3	99	86.402	ENSORLG00020012262	edc3	99	86.402	Oryzias_latipes_hni
ENSCSEG00000012996	edc3	99	64.523	ENSORLG00020019446	-	99	64.523	Oryzias_latipes_hni
ENSCSEG00000012996	edc3	99	64.523	ENSORLG00015017635	-	95	64.523	Oryzias_latipes_hsok
ENSCSEG00000012996	edc3	99	86.611	ENSORLG00015005634	edc3	99	86.611	Oryzias_latipes_hsok
ENSCSEG00000012996	edc3	99	86.583	ENSOMEG00000014026	edc3	99	86.583	Oryzias_melastigma
ENSCSEG00000012996	edc3	99	65.696	ENSOMEG00000017354	EDC3	99	65.696	Oryzias_melastigma
ENSCSEG00000012996	edc3	99	69.291	ENSOGAG00000014441	EDC3	99	69.291	Otolemur_garnettii
ENSCSEG00000012996	edc3	99	68.762	ENSOARG00000003476	EDC3	99	69.155	Ovis_aries
ENSCSEG00000012996	edc3	99	69.685	ENSPPAG00000040143	EDC3	99	69.685	Pan_paniscus
ENSCSEG00000012996	edc3	99	69.685	ENSPPRG00000006257	EDC3	99	69.685	Panthera_pardus
ENSCSEG00000012996	edc3	99	69.685	ENSPTIG00000017424	EDC3	99	69.685	Panthera_tigris_altaica
ENSCSEG00000012996	edc3	99	69.685	ENSPTRG00000007279	EDC3	99	69.685	Pan_troglodytes
ENSCSEG00000012996	edc3	99	69.488	ENSPANG00000015997	EDC3	99	69.488	Papio_anubis
ENSCSEG00000012996	edc3	99	75.248	ENSPKIG00000004416	edc3	99	75.248	Paramormyrops_kingsleyae
ENSCSEG00000012996	edc3	99	76.721	ENSPKIG00000019810	EDC3	99	76.721	Paramormyrops_kingsleyae
ENSCSEG00000012996	edc3	99	66.339	ENSPSIG00000008474	EDC3	99	66.535	Pelodiscus_sinensis
ENSCSEG00000012996	edc3	99	87.056	ENSPMGG00000007223	edc3	99	87.056	Periophthalmus_magnuspinnatus
ENSCSEG00000012996	edc3	99	69.488	ENSPEMG00000015260	Edc3	99	69.488	Peromyscus_maniculatus_bairdii
ENSCSEG00000012996	edc3	99	69.565	ENSPCIG00000006276	EDC3	70	69.565	Phascolarctos_cinereus
ENSCSEG00000012996	edc3	99	90.147	ENSPFOG00000012204	edc3	99	90.147	Poecilia_formosa
ENSCSEG00000012996	edc3	99	90.147	ENSPLAG00000014420	edc3	99	90.147	Poecilia_latipinna
ENSCSEG00000012996	edc3	99	90.147	ENSPMEG00000023289	edc3	99	90.147	Poecilia_mexicana
ENSCSEG00000012996	edc3	99	90.147	ENSPREG00000016022	edc3	99	90.147	Poecilia_reticulata
ENSCSEG00000012996	edc3	99	68.898	ENSPPYG00000006642	EDC3	99	68.898	Pongo_abelii
ENSCSEG00000012996	edc3	93	81.481	ENSPCAG00000002802	EDC3	87	81.481	Procavia_capensis
ENSCSEG00000012996	edc3	99	69.685	ENSPCOG00000013364	EDC3	99	69.685	Propithecus_coquereli
ENSCSEG00000012996	edc3	99	69.488	ENSPVAG00000014733	EDC3	99	69.488	Pteropus_vampyrus
ENSCSEG00000012996	edc3	99	91.614	ENSPNYG00000021797	edc3	99	91.614	Pundamilia_nyererei
ENSCSEG00000012996	edc3	99	67.360	ENSPNYG00000009669	EDC3	99	67.360	Pundamilia_nyererei
ENSCSEG00000012996	edc3	99	80.119	ENSPNAG00000019657	edc3	99	80.119	Pygocentrus_nattereri
ENSCSEG00000012996	edc3	99	68.911	ENSRNOG00000019579	Edc3	99	68.972	Rattus_norvegicus
ENSCSEG00000012996	edc3	99	69.488	ENSRBIG00000019488	EDC3	99	69.488	Rhinopithecus_bieti
ENSCSEG00000012996	edc3	99	69.488	ENSRROG00000034959	EDC3	99	69.488	Rhinopithecus_roxellana
ENSCSEG00000012996	edc3	99	69.488	ENSSBOG00000004896	EDC3	99	69.488	Saimiri_boliviensis_boliviensis
ENSCSEG00000012996	edc3	96	68.648	ENSSHAG00000015075	EDC3	95	68.648	Sarcophilus_harrisii
ENSCSEG00000012996	edc3	99	79.242	ENSSFOG00015016939	edc3	99	79.242	Scleropages_formosus
ENSCSEG00000012996	edc3	99	73.651	ENSSFOG00015002439	edc3	99	74.066	Scleropages_formosus
ENSCSEG00000012996	edc3	99	65.904	ENSSMAG00000010176	-	99	65.904	Scophthalmus_maximus
ENSCSEG00000012996	edc3	99	92.662	ENSSMAG00000010695	edc3	99	92.662	Scophthalmus_maximus
ENSCSEG00000012996	edc3	99	92.662	ENSSDUG00000021844	edc3	99	92.662	Seriola_dumerili
ENSCSEG00000012996	edc3	99	68.607	ENSSDUG00000007671	EDC3	99	68.607	Seriola_dumerili
ENSCSEG00000012996	edc3	99	92.662	ENSSLDG00000022046	edc3	99	92.662	Seriola_lalandi_dorsalis
ENSCSEG00000012996	edc3	79	77.733	ENSSARG00000003907	EDC3	80	77.733	Sorex_araneus
ENSCSEG00000012996	edc3	99	69.882	ENSSPUG00000008232	EDC3	99	69.882	Sphenodon_punctatus
ENSCSEG00000012996	edc3	99	92.872	ENSSPAG00000010009	edc3	99	92.872	Stegastes_partitus
ENSCSEG00000012996	edc3	99	66.320	ENSSPAG00000020327	EDC3	99	66.528	Stegastes_partitus
ENSCSEG00000012996	edc3	99	71.399	ENSSSCG00000001903	EDC3	99	71.399	Sus_scrofa
ENSCSEG00000012996	edc3	99	70.553	ENSTGUG00000004007	EDC3	99	70.553	Taeniopygia_guttata
ENSCSEG00000012996	edc3	99	90.356	ENSTRUG00000017078	edc3	99	90.356	Takifugu_rubripes
ENSCSEG00000012996	edc3	99	88.518	ENSTNIG00000016047	edc3	99	88.518	Tetraodon_nigroviridis
ENSCSEG00000012996	edc3	99	70.020	ENSTTRG00000007990	EDC3	99	70.020	Tursiops_truncatus
ENSCSEG00000012996	edc3	99	69.685	ENSUAMG00000026710	-	99	69.685	Ursus_americanus
ENSCSEG00000012996	edc3	99	69.685	ENSUMAG00000005006	EDC3	95	69.685	Ursus_maritimus
ENSCSEG00000012996	edc3	84	72.222	ENSVPAG00000003499	-	78	72.222	Vicugna_pacos
ENSCSEG00000012996	edc3	99	69.488	ENSVVUG00000018601	EDC3	99	69.488	Vulpes_vulpes
ENSCSEG00000012996	edc3	72	75.358	ENSXETG00000010622	edc3	99	76.791	Xenopus_tropicalis
ENSCSEG00000012996	edc3	99	89.518	ENSXMAG00000007377	edc3	99	89.518	Xiphophorus_maculatus