EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000013009 (Gene tree)
Gene ID: 103378242
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 8780 bases
Position: chr4:13833758-13842537
Accession: 103378242
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000020410	AARP2CN	PF08142.12	7.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000020664	-	5125	XM_008309383	ENSCSEP00000020410	828 (aa)	XP_008307605	UPI000496DDF5

Gene Model

Click here to download ENSCSEG00000013009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000013009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000013009	tsr1	99	54.012	ENSG00000167721	TSR1	99	54.371	Homo_sapiens
ENSCSEG00000013009	tsr1	100	82.416	ENSAPOG00000020891	tsr1	100	81.916	Acanthochromis_polyacanthus
ENSCSEG00000013009	tsr1	99	53.855	ENSAMEG00000007599	TSR1	99	54.293	Ailuropoda_melanoleuca
ENSCSEG00000013009	tsr1	100	79.252	ENSACIG00000007090	tsr1	100	78.287	Amphilophus_citrinellus
ENSCSEG00000013009	tsr1	100	82.812	ENSAOCG00000023284	tsr1	100	82.190	Amphiprion_ocellaris
ENSCSEG00000013009	tsr1	93	82.581	ENSAPEG00000008452	tsr1	100	81.912	Amphiprion_percula
ENSCSEG00000013009	tsr1	100	80.765	ENSATEG00000021961	tsr1	100	81.362	Anabas_testudineus
ENSCSEG00000013009	tsr1	90	58.777	ENSAPLG00000013422	TSR1	99	57.916	Anas_platyrhynchos
ENSCSEG00000013009	tsr1	71	47.746	ENSACAG00000000859	TSR1	92	47.659	Anolis_carolinensis
ENSCSEG00000013009	tsr1	99	55.139	ENSANAG00000031071	TSR1	99	54.392	Aotus_nancymaae
ENSCSEG00000013009	tsr1	100	80.746	ENSACLG00000007595	tsr1	99	80.144	Astatotilapia_calliptera
ENSCSEG00000013009	tsr1	50	72.143	ENSAMXG00000008470	tsr1	90	72.000	Astyanax_mexicanus
ENSCSEG00000013009	tsr1	99	55.260	ENSBTAG00000004225	TSR1	99	54.051	Bos_taurus
ENSCSEG00000013009	tsr1	67	31.076	WBGene00022021	Y61A9LA.10	51	31.076	Caenorhabditis_elegans
ENSCSEG00000013009	tsr1	96	39.066	WBGene00006497	tag-151	96	39.655	Caenorhabditis_elegans
ENSCSEG00000013009	tsr1	99	54.414	ENSCJAG00000012456	TSR1	99	53.911	Callithrix_jacchus
ENSCSEG00000013009	tsr1	89	52.730	ENSCAFG00000019273	-	100	55.539	Canis_familiaris
ENSCSEG00000013009	tsr1	99	55.127	ENSCAFG00000002106	-	99	54.197	Canis_familiaris
ENSCSEG00000013009	tsr1	99	55.127	ENSCAFG00020009728	TSR1	99	54.197	Canis_lupus_dingo
ENSCSEG00000013009	tsr1	99	55.758	ENSCHIG00000023935	TSR1	99	54.469	Capra_hircus
ENSCSEG00000013009	tsr1	99	55.515	ENSTSYG00000005468	TSR1	99	55.181	Carlito_syrichta
ENSCSEG00000013009	tsr1	92	55.065	ENSCPOG00000014833	TSR1	99	54.145	Cavia_porcellus
ENSCSEG00000013009	tsr1	92	54.226	ENSCCAG00000028962	TSR1	98	53.687	Cebus_capucinus
ENSCSEG00000013009	tsr1	99	54.731	ENSCATG00000044262	TSR1	99	54.688	Cercocebus_atys
ENSCSEG00000013009	tsr1	99	55.152	ENSCLAG00000005567	TSR1	99	54.994	Chinchilla_lanigera
ENSCSEG00000013009	tsr1	99	54.611	ENSCSAG00000013788	TSR1	99	54.567	Chlorocebus_sabaeus
ENSCSEG00000013009	tsr1	98	55.678	ENSCPBG00000020363	TSR1	97	54.765	Chrysemys_picta_bellii
ENSCSEG00000013009	tsr1	96	44.951	ENSCING00000020658	-	99	44.212	Ciona_intestinalis
ENSCSEG00000013009	tsr1	96	44.951	ENSCSAVG00000001875	-	100	43.812	Ciona_savignyi
ENSCSEG00000013009	tsr1	99	49.579	ENSCANG00000033056	TSR1	99	51.199	Colobus_angolensis_palliatus
ENSCSEG00000013009	tsr1	99	53.855	ENSCGRG00001023942	Tsr1	99	53.486	Cricetulus_griseus_chok1gshd
ENSCSEG00000013009	tsr1	99	48.970	ENSCGRG00000013015	Tsr1	51	47.179	Cricetulus_griseus_crigri
ENSCSEG00000013009	tsr1	99	77.295	ENSCVAG00000000506	tsr1	100	76.691	Cyprinodon_variegatus
ENSCSEG00000013009	tsr1	100	72.269	ENSDARG00000007744	tsr1	100	72.389	Danio_rerio
ENSCSEG00000013009	tsr1	99	56.643	ENSDNOG00000004715	TSR1	99	57.042	Dasypus_novemcinctus
ENSCSEG00000013009	tsr1	99	53.930	ENSDORG00000016371	-	99	53.438	Dipodomys_ordii
ENSCSEG00000013009	tsr1	96	48.492	ENSDORG00000023234	-	99	48.250	Dipodomys_ordii
ENSCSEG00000013009	tsr1	96	43.812	FBgn0037073	Tsr1	96	43.387	Drosophila_melanogaster
ENSCSEG00000013009	tsr1	87	67.541	ENSETEG00000017534	TSR1	89	67.541	Echinops_telfairi
ENSCSEG00000013009	tsr1	95	51.392	ENSEBUG00000013731	TSR1	98	49.812	Eptatretus_burgeri
ENSCSEG00000013009	tsr1	99	55.394	ENSEASG00005009302	TSR1	97	55.030	Equus_asinus_asinus
ENSCSEG00000013009	tsr1	99	55.407	ENSECAG00000009114	TSR1	99	55.043	Equus_caballus
ENSCSEG00000013009	tsr1	100	73.653	ENSELUG00000020984	tsr1	96	73.533	Esox_lucius
ENSCSEG00000013009	tsr1	99	54.753	ENSFCAG00000006313	TSR1	99	54.392	Felis_catus
ENSCSEG00000013009	tsr1	99	57.920	ENSFALG00000006532	TSR1	99	55.952	Ficedula_albicollis
ENSCSEG00000013009	tsr1	99	54.655	ENSFDAG00000006038	TSR1	99	53.661	Fukomys_damarensis
ENSCSEG00000013009	tsr1	100	78.017	ENSFHEG00000003626	tsr1	99	77.751	Fundulus_heteroclitus
ENSCSEG00000013009	tsr1	100	70.504	ENSGMOG00000010336	tsr1	100	69.581	Gadus_morhua
ENSCSEG00000013009	tsr1	100	78.271	ENSGAFG00000012993	tsr1	99	77.284	Gambusia_affinis
ENSCSEG00000013009	tsr1	100	77.685	ENSGACG00000010843	tsr1	100	77.685	Gasterosteus_aculeatus
ENSCSEG00000013009	tsr1	98	55.189	ENSGAGG00000025619	-	99	54.479	Gopherus_agassizii
ENSCSEG00000013009	tsr1	99	54.688	ENSGGOG00000001704	TSR1	99	54.567	Gorilla_gorilla
ENSCSEG00000013009	tsr1	100	81.250	ENSHBUG00000017904	tsr1	100	80.000	Haplochromis_burtoni
ENSCSEG00000013009	tsr1	99	56.000	ENSHGLG00000012806	-	99	54.633	Heterocephalus_glaber_female
ENSCSEG00000013009	tsr1	96	49.437	ENSHGLG00000015688	-	98	48.134	Heterocephalus_glaber_female
ENSCSEG00000013009	tsr1	99	56.000	ENSHGLG00100015392	TSR1	99	54.633	Heterocephalus_glaber_male
ENSCSEG00000013009	tsr1	100	78.072	ENSHCOG00000001432	tsr1	100	77.470	Hippocampus_comes
ENSCSEG00000013009	tsr1	100	71.326	ENSIPUG00000004618	tsr1	100	71.326	Ictalurus_punctatus
ENSCSEG00000013009	tsr1	99	54.909	ENSSTOG00000011819	TSR1	99	53.986	Ictidomys_tridecemlineatus
ENSCSEG00000013009	tsr1	90	52.694	ENSJJAG00000019505	Tsr1	95	51.436	Jaculus_jaculus
ENSCSEG00000013009	tsr1	100	78.005	ENSKMAG00000005763	tsr1	99	78.966	Kryptolebias_marmoratus
ENSCSEG00000013009	tsr1	100	80.719	ENSLBEG00000021823	tsr1	99	81.437	Labrus_bergylta
ENSCSEG00000013009	tsr1	99	56.340	ENSLACG00000002197	TSR1	100	55.675	Latimeria_chalumnae
ENSCSEG00000013009	tsr1	90	76.000	ENSLOCG00000006491	TSR1	98	76.000	Lepisosteus_oculatus
ENSCSEG00000013009	tsr1	99	54.850	ENSMFAG00000021330	TSR1	99	54.808	Macaca_fascicularis
ENSCSEG00000013009	tsr1	99	54.731	ENSMMUG00000017519	TSR1	99	54.688	Macaca_mulatta
ENSCSEG00000013009	tsr1	99	54.850	ENSMNEG00000031382	TSR1	99	54.808	Macaca_nemestrina
ENSCSEG00000013009	tsr1	99	54.611	ENSMLEG00000036733	TSR1	99	54.567	Mandrillus_leucophaeus
ENSCSEG00000013009	tsr1	100	80.691	ENSMAMG00000017918	tsr1	99	80.453	Mastacembelus_armatus
ENSCSEG00000013009	tsr1	100	81.152	ENSMZEG00005007477	tsr1	100	79.017	Maylandia_zebra
ENSCSEG00000013009	tsr1	100	57.330	ENSMGAG00000005576	TSR1	100	56.888	Meleagris_gallopavo
ENSCSEG00000013009	tsr1	99	56.242	ENSMICG00000012943	TSR1	99	55.596	Microcebus_murinus
ENSCSEG00000013009	tsr1	99	53.670	ENSMOCG00000022764	Tsr1	99	53.189	Microtus_ochrogaster
ENSCSEG00000013009	tsr1	100	80.843	ENSMMOG00000014280	tsr1	100	80.843	Mola_mola
ENSCSEG00000013009	tsr1	98	55.854	ENSMODG00000010658	TSR1	99	56.068	Monodelphis_domestica
ENSCSEG00000013009	tsr1	100	79.736	ENSMALG00000011681	tsr1	100	80.695	Monopterus_albus
ENSCSEG00000013009	tsr1	99	53.809	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.253	Mus_caroli
ENSCSEG00000013009	tsr1	99	54.414	ENSMUSG00000038335	Tsr1	99	53.855	Mus_musculus
ENSCSEG00000013009	tsr1	99	54.897	MGP_PahariEiJ_G0017864	Tsr1	99	54.172	Mus_pahari
ENSCSEG00000013009	tsr1	99	54.293	MGP_SPRETEiJ_G0017570	Tsr1	99	53.597	Mus_spretus
ENSCSEG00000013009	tsr1	81	58.065	ENSMPUG00000013000	TSR1	100	56.623	Mustela_putorius_furo
ENSCSEG00000013009	tsr1	98	56.220	ENSMLUG00000003505	TSR1	99	55.043	Myotis_lucifugus
ENSCSEG00000013009	tsr1	100	81.393	ENSNBRG00000020728	tsr1	99	80.672	Neolamprologus_brichardi
ENSCSEG00000013009	tsr1	99	49.036	ENSNLEG00000017184	TSR1	98	63.966	Nomascus_leucogenys
ENSCSEG00000013009	tsr1	99	51.449	ENSMEUG00000015828	TSR1	99	51.812	Notamacropus_eugenii
ENSCSEG00000013009	tsr1	100	80.096	ENSONIG00000013131	tsr1	100	79.257	Oreochromis_niloticus
ENSCSEG00000013009	tsr1	99	55.623	ENSOCUG00000014256	TSR1	99	55.394	Oryctolagus_cuniculus
ENSCSEG00000013009	tsr1	100	78.966	ENSORLG00000004926	tsr1	99	78.966	Oryzias_latipes
ENSCSEG00000013009	tsr1	100	78.966	ENSORLG00020008792	tsr1	99	78.966	Oryzias_latipes_hni
ENSCSEG00000013009	tsr1	100	79.087	ENSORLG00015013838	tsr1	99	79.087	Oryzias_latipes_hsok
ENSCSEG00000013009	tsr1	100	78.726	ENSOMEG00000004830	tsr1	99	77.885	Oryzias_melastigma
ENSCSEG00000013009	tsr1	99	54.122	ENSOGAG00000004492	TSR1	99	53.763	Otolemur_garnettii
ENSCSEG00000013009	tsr1	99	55.758	ENSOARG00000015437	TSR1	97	54.469	Ovis_aries
ENSCSEG00000013009	tsr1	99	54.012	ENSPPAG00000036355	TSR1	99	54.371	Pan_paniscus
ENSCSEG00000013009	tsr1	99	54.633	ENSPPRG00000015519	-	99	54.831	Panthera_pardus
ENSCSEG00000013009	tsr1	99	54.633	ENSPTIG00000010608	TSR1	99	54.831	Panthera_tigris_altaica
ENSCSEG00000013009	tsr1	99	54.012	ENSPTRG00000008547	TSR1	99	54.371	Pan_troglodytes
ENSCSEG00000013009	tsr1	99	52.575	ENSPANG00000024463	TSR1	99	52.587	Papio_anubis
ENSCSEG00000013009	tsr1	100	69.712	ENSPKIG00000013972	tsr1	100	69.712	Paramormyrops_kingsleyae
ENSCSEG00000013009	tsr1	87	54.621	ENSPSIG00000018258	TSR1	99	53.709	Pelodiscus_sinensis
ENSCSEG00000013009	tsr1	99	77.872	ENSPMGG00000011577	tsr1	100	77.349	Periophthalmus_magnuspinnatus
ENSCSEG00000013009	tsr1	99	53.325	ENSPEMG00000018033	Tsr1	99	52.169	Peromyscus_maniculatus_bairdii
ENSCSEG00000013009	tsr1	99	56.092	ENSPCIG00000009357	TSR1	97	55.529	Phascolarctos_cinereus
ENSCSEG00000013009	tsr1	100	77.284	ENSPFOG00000004483	TSR1	100	77.524	Poecilia_formosa
ENSCSEG00000013009	tsr1	100	77.033	ENSPLAG00000022320	tsr1	99	76.675	Poecilia_latipinna
ENSCSEG00000013009	tsr1	100	77.392	ENSPMEG00000004577	tsr1	99	77.392	Poecilia_mexicana
ENSCSEG00000013009	tsr1	97	78.202	ENSPREG00000010354	tsr1	96	78.967	Poecilia_reticulata
ENSCSEG00000013009	tsr1	99	50.119	ENSPPYG00000007792	TSR1	99	50.299	Pongo_abelii
ENSCSEG00000013009	tsr1	51	63.415	ENSPCAG00000012973	-	71	63.415	Procavia_capensis
ENSCSEG00000013009	tsr1	99	55.650	ENSPCOG00000017928	TSR1	99	55.006	Propithecus_coquereli
ENSCSEG00000013009	tsr1	99	55.030	ENSPVAG00000002162	TSR1	99	54.106	Pteropus_vampyrus
ENSCSEG00000013009	tsr1	100	80.746	ENSPNYG00000016163	tsr1	99	80.144	Pundamilia_nyererei
ENSCSEG00000013009	tsr1	99	73.469	ENSPNAG00000008659	tsr1	99	73.589	Pygocentrus_nattereri
ENSCSEG00000013009	tsr1	99	54.293	ENSRNOG00000002980	Tsr1	99	53.735	Rattus_norvegicus
ENSCSEG00000013009	tsr1	99	55.060	ENSRBIG00000040016	TSR1	99	54.458	Rhinopithecus_bieti
ENSCSEG00000013009	tsr1	99	54.940	ENSRROG00000030361	TSR1	99	54.337	Rhinopithecus_roxellana
ENSCSEG00000013009	tsr1	99	54.897	ENSSBOG00000020785	TSR1	99	54.534	Saimiri_boliviensis_boliviensis
ENSCSEG00000013009	tsr1	99	55.918	ENSSHAG00000011394	TSR1	99	56.401	Sarcophilus_harrisii
ENSCSEG00000013009	tsr1	100	71.084	ENSSFOG00015005455	tsr1	100	71.084	Scleropages_formosus
ENSCSEG00000013009	tsr1	100	83.553	ENSSMAG00000009504	tsr1	100	83.673	Scophthalmus_maximus
ENSCSEG00000013009	tsr1	100	82.974	ENSSDUG00000012074	tsr1	99	82.854	Seriola_dumerili
ENSCSEG00000013009	tsr1	100	83.293	ENSSLDG00000002031	tsr1	99	83.413	Seriola_lalandi_dorsalis
ENSCSEG00000013009	tsr1	93	55.777	ENSSARG00000000759	TSR1	93	55.777	Sorex_araneus
ENSCSEG00000013009	tsr1	100	56.548	ENSSPUG00000007042	TSR1	100	56.750	Sphenodon_punctatus
ENSCSEG00000013009	tsr1	100	81.840	ENSSPAG00000021951	tsr1	100	82.676	Stegastes_partitus
ENSCSEG00000013009	tsr1	99	56.386	ENSSSCG00000038534	TSR1	99	55.836	Sus_scrofa
ENSCSEG00000013009	tsr1	90	59.867	ENSTGUG00000005883	TSR1	100	57.576	Taeniopygia_guttata
ENSCSEG00000013009	tsr1	100	78.313	ENSTRUG00000004665	tsr1	100	77.831	Takifugu_rubripes
ENSCSEG00000013009	tsr1	99	78.007	ENSTNIG00000016196	tsr1	100	77.764	Tetraodon_nigroviridis
ENSCSEG00000013009	tsr1	66	73.846	ENSTBEG00000015275	-	66	73.846	Tupaia_belangeri
ENSCSEG00000013009	tsr1	99	56.121	ENSTTRG00000001177	TSR1	99	55.569	Tursiops_truncatus
ENSCSEG00000013009	tsr1	99	54.897	ENSUAMG00000025160	TSR1	99	54.380	Ursus_americanus
ENSCSEG00000013009	tsr1	96	54.534	ENSUMAG00000009294	TSR1	99	53.970	Ursus_maritimus
ENSCSEG00000013009	tsr1	83	49.928	ENSVPAG00000000228	TSR1	99	48.633	Vicugna_pacos
ENSCSEG00000013009	tsr1	99	54.765	ENSVVUG00000021767	TSR1	99	53.837	Vulpes_vulpes
ENSCSEG00000013009	tsr1	99	50.955	ENSXETG00000023797	tsr1	100	50.597	Xenopus_tropicalis
ENSCSEG00000013009	tsr1	100	77.349	ENSXCOG00000009635	tsr1	100	77.108	Xiphophorus_couchianus
ENSCSEG00000013009	tsr1	100	77.885	ENSXMAG00000001397	tsr1	97	77.136	Xiphophorus_maculatus