EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000013066 (Gene tree)
Gene ID
103378238
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Minus strand
Length
12449 bases
Position
chr4:13993237-14005685
Accession
103378238
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000020514tRNA_anti-codonPF01336.253.3e-0911
ENSCSEP00000020488tRNA_anti-codonPF01336.253.8e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000020749-6960XM_008309377ENSCSEP00000020488607 (aa)XP_008307599UPI0004955B33
ENSCSET00000020774-1758-ENSCSEP00000020514585 (aa)--
Gene Model
Click here to download ENSCSEG00000013066's gene model file
Pathways
Pathway IDPathway NameSource
csem03030DNA replicationKEGG
csem03420Nucleotide excision repairKEGG
csem03430Mismatch repairKEGG
csem03440Homologous recombinationKEGG
csem03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000013066's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000013066rpa19954.080ENSCSEG00000012726RPA19954.966
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000013066rpa19268.519ENSAPOG00000019409RPA18968.519Acanthochromis_polyacanthus
ENSCSEG00000013066rpa110078.748ENSAPOG00000011658rpa110078.913Acanthochromis_polyacanthus
ENSCSEG00000013066rpa19959.902ENSAMEG00000007706RPA19959.902Ailuropoda_melanoleuca
ENSCSEG00000013066rpa19673.288ENSACIG00000007277rpa19973.288Amphilophus_citrinellus
ENSCSEG00000013066rpa19761.499ENSACIG00000012881RPA19962.181Amphilophus_citrinellus
ENSCSEG00000013066rpa110078.748ENSAOCG00000023376rpa110078.748Amphiprion_ocellaris
ENSCSEG00000013066rpa19268.009ENSAOCG00000009003RPA19957.984Amphiprion_ocellaris
ENSCSEG00000013066rpa110079.077ENSAPEG00000008634rpa110079.077Amphiprion_percula
ENSCSEG00000013066rpa19268.233ENSAPEG00000019132RPA19957.121Amphiprion_percula
ENSCSEG00000013066rpa19680.212ENSATEG00000022024rpa110080.212Anabas_testudineus
ENSCSEG00000013066rpa19069.213ENSATEG00000006443RPA19958.089Anabas_testudineus
ENSCSEG00000013066rpa19850.735ENSAPLG00000012442RPA110051.173Anas_platyrhynchos
ENSCSEG00000013066rpa19956.414ENSACAG00000014490RPA19956.093Anolis_carolinensis
ENSCSEG00000013066rpa19761.577ENSANAG00000023456RPA19861.577Aotus_nancymaae
ENSCSEG00000013066rpa19581.115ENSACLG00000006640rpa19981.115Astatotilapia_calliptera
ENSCSEG00000013066rpa19960.630ENSACLG00000005223RPA19960.630Astatotilapia_calliptera
ENSCSEG00000013066rpa19972.351ENSAMXG00000008418rpa19973.510Astyanax_mexicanus
ENSCSEG00000013066rpa19960.556ENSBTAG00000009711RPA19960.556Bos_taurus
ENSCSEG00000013066rpa17331.797WBGene00017546rpa-16531.797Caenorhabditis_elegans
ENSCSEG00000013066rpa19960.033ENSCJAG00000001848RPA19960.033Callithrix_jacchus
ENSCSEG00000013066rpa19960.912ENSCAFG00000019249RPA19961.238Canis_familiaris
ENSCSEG00000013066rpa19960.912ENSCAFG00020009847RPA19961.238Canis_lupus_dingo
ENSCSEG00000013066rpa19961.047ENSCHIG00000026308RPA19961.047Capra_hircus
ENSCSEG00000013066rpa19959.804ENSTSYG00000003482-9959.804Carlito_syrichta
ENSCSEG00000013066rpa19959.380ENSCPOG00000000035RPA19959.380Cavia_porcellus
ENSCSEG00000013066rpa19949.429ENSCCAG00000010981RPA19949.592Cebus_capucinus
ENSCSEG00000013066rpa19956.046ENSCLAG00000015045-9956.046Chinchilla_lanigera
ENSCSEG00000013066rpa19959.543ENSCLAG00000005185-9959.543Chinchilla_lanigera
ENSCSEG00000013066rpa19949.346ENSCSAG00000013833RPA19949.918Chlorocebus_sabaeus
ENSCSEG00000013066rpa19758.532ENSCHOG00000013540-9959.455Choloepus_hoffmanni
ENSCSEG00000013066rpa17466.514ENSCHOG00000009454-9966.514Choloepus_hoffmanni
ENSCSEG00000013066rpa19960.912ENSCPBG00000020377RPA19961.431Chrysemys_picta_bellii
ENSCSEG00000013066rpa19942.409ENSCING00000023482-9942.409Ciona_intestinalis
ENSCSEG00000013066rpa19761.996ENSCANG00000030911RPA19761.996Colobus_angolensis_palliatus
ENSCSEG00000013066rpa19960.685ENSCGRG00001008197Rpa19960.848Cricetulus_griseus_chok1gshd
ENSCSEG00000013066rpa18161.660ENSCGRG00000000582Rpa19961.858Cricetulus_griseus_crigri
ENSCSEG00000013066rpa18767.866ENSCVAG00000013446-9656.522Cyprinodon_variegatus
ENSCSEG00000013066rpa110079.112ENSCVAG00000019431rpa110079.310Cyprinodon_variegatus
ENSCSEG00000013066rpa19969.917ENSDARG00000003938rpa19969.917Danio_rerio
ENSCSEG00000013066rpa19960.855ENSDNOG00000017218RPA19960.855Dasypus_novemcinctus
ENSCSEG00000013066rpa19960.784ENSDORG00000006199Rpa19960.948Dipodomys_ordii
ENSCSEG00000013066rpa19940.717FBgn0010173RpA-709941.789Drosophila_melanogaster
ENSCSEG00000013066rpa18267.708ENSETEG00000017608RPA18267.708Echinops_telfairi
ENSCSEG00000013066rpa19861.167ENSEASG00005009372RPA19962.589Equus_asinus_asinus
ENSCSEG00000013066rpa19961.211ENSECAG00000023886RPA19961.375Equus_caballus
ENSCSEG00000013066rpa17166.826ENSEEUG00000002186-6866.826Erinaceus_europaeus
ENSCSEG00000013066rpa18960.878ENSELUG00000006136RPA19960.878Esox_lucius
ENSCSEG00000013066rpa19975.941ENSELUG00000021071rpa19975.941Esox_lucius
ENSCSEG00000013066rpa19959.574ENSFCAG00000006306RPA19959.574Felis_catus
ENSCSEG00000013066rpa19959.578ENSFALG00000006575RPA19959.578Ficedula_albicollis
ENSCSEG00000013066rpa19960.098ENSFDAG00000007720RPA19960.098Fukomys_damarensis
ENSCSEG00000013066rpa110077.941ENSFHEG00000003580rpa110077.941Fundulus_heteroclitus
ENSCSEG00000013066rpa19972.712ENSGMOG00000010382rpa19972.712Gadus_morhua
ENSCSEG00000013066rpa19958.958ENSGALG00000003072RPA19958.958Gallus_gallus
ENSCSEG00000013066rpa19957.252ENSGAFG00000020953RPA19957.686Gambusia_affinis
ENSCSEG00000013066rpa110078.583ENSGAFG00000012916rpa110078.583Gambusia_affinis
ENSCSEG00000013066rpa110078.125ENSGACG00000010856rpa110078.125Gasterosteus_aculeatus
ENSCSEG00000013066rpa19960.586ENSGAGG00000013611RPA19960.586Gopherus_agassizii
ENSCSEG00000013066rpa19762.390ENSGGOG00000014186RPA19960.297Gorilla_gorilla
ENSCSEG00000013066rpa19981.188ENSHBUG00000017773rpa19981.188Haplochromis_burtoni
ENSCSEG00000013066rpa19757.539ENSHBUG00000009348RPA19957.539Haplochromis_burtoni
ENSCSEG00000013066rpa19959.609ENSHGLG00000008846RPA19959.574Heterocephalus_glaber_female
ENSCSEG00000013066rpa19950.654ENSHGLG00100002005-9950.980Heterocephalus_glaber_male
ENSCSEG00000013066rpa19959.609ENSHGLG00100017755-9959.574Heterocephalus_glaber_male
ENSCSEG00000013066rpa19955.863ENSHGLG00100000799-9955.863Heterocephalus_glaber_male
ENSCSEG00000013066rpa110071.916ENSHCOG00000001401rpa110071.916Hippocampus_comes
ENSCSEG00000013066rpa19945.408ENSHCOG00000000351RPA19845.194Hippocampus_comes
ENSCSEG00000013066rpa19972.442ENSIPUG00000004400rpa19972.442Ictalurus_punctatus
ENSCSEG00000013066rpa19259.083ENSSTOG00000022475RPA19560.035Ictidomys_tridecemlineatus
ENSCSEG00000013066rpa19759.966ENSJJAG00000000876Rpa19860.508Jaculus_jaculus
ENSCSEG00000013066rpa19959.113ENSKMAG00000000234RPA19959.113Kryptolebias_marmoratus
ENSCSEG00000013066rpa110075.856ENSKMAG00000005605rpa110076.873Kryptolebias_marmoratus
ENSCSEG00000013066rpa19977.504ENSLBEG00000021604rpa19977.504Labrus_bergylta
ENSCSEG00000013066rpa19966.225ENSLBEG00000002281RPA18666.225Labrus_bergylta
ENSCSEG00000013066rpa17862.391ENSLACG00000007210RPA19860.455Latimeria_chalumnae
ENSCSEG00000013066rpa19968.361ENSLOCG00000006397rpa19968.361Lepisosteus_oculatus
ENSCSEG00000013066rpa19959.516ENSLAFG00000015354RPA19959.516Loxodonta_africana
ENSCSEG00000013066rpa18258.532ENSMFAG00000036138-9959.010Macaca_fascicularis
ENSCSEG00000013066rpa19955.592ENSMMUG00000002442-9955.592Macaca_mulatta
ENSCSEG00000013066rpa19960.132ENSMMUG00000011604-9960.531Macaca_mulatta
ENSCSEG00000013066rpa18660.917ENSMNEG00000029837-9760.917Macaca_nemestrina
ENSCSEG00000013066rpa19959.401ENSMNEG00000031632-9959.477Macaca_nemestrina
ENSCSEG00000013066rpa19856.529ENSMLEG00000038768-9956.860Mandrillus_leucophaeus
ENSCSEG00000013066rpa110080.066ENSMAMG00000017993rpa110080.066Mastacembelus_armatus
ENSCSEG00000013066rpa19467.907ENSMAMG00000020097RPA19956.072Mastacembelus_armatus
ENSCSEG00000013066rpa19960.630ENSMZEG00005024731RPA19960.630Maylandia_zebra
ENSCSEG00000013066rpa19981.353ENSMZEG00005007551rpa19981.353Maylandia_zebra
ENSCSEG00000013066rpa19958.361ENSMGAG00000005315RPA19858.361Meleagris_gallopavo
ENSCSEG00000013066rpa19860.833ENSMAUG00000010474Rpa19960.833Mesocricetus_auratus
ENSCSEG00000013066rpa19961.475ENSMICG00000012867RPA19961.475Microcebus_murinus
ENSCSEG00000013066rpa19960.099ENSMOCG00000013019Rpa19960.099Microtus_ochrogaster
ENSCSEG00000013066rpa19761.972ENSMMOG00000010868RPA19860.430Mola_mola
ENSCSEG00000013066rpa110077.924ENSMMOG00000014292rpa19979.522Mola_mola
ENSCSEG00000013066rpa19960.227ENSMODG00000010549RPA19960.227Monodelphis_domestica
ENSCSEG00000013066rpa19968.493ENSMALG00000001208RPA18668.493Monopterus_albus
ENSCSEG00000013066rpa110080.231ENSMALG00000011453rpa110080.231Monopterus_albus
ENSCSEG00000013066rpa19960.458MGP_CAROLIEiJ_G0016734Rpa19960.458Mus_caroli
ENSCSEG00000013066rpa19959.547ENSMUSG00000000751Rpa19959.547Mus_musculus
ENSCSEG00000013066rpa19960.488MGP_PahariEiJ_G0017871Rpa19960.650Mus_pahari
ENSCSEG00000013066rpa19959.451MGP_SPRETEiJ_G0017577Rpa19959.451Mus_spretus
ENSCSEG00000013066rpa19961.047ENSMPUG00000013119RPA19961.047Mustela_putorius_furo
ENSCSEG00000013066rpa19959.968ENSMLUG00000006113RPA19959.968Myotis_lucifugus
ENSCSEG00000013066rpa19959.000ENSNGAG00000004522Rpa19659.000Nannospalax_galili
ENSCSEG00000013066rpa19859.136ENSNBRG00000009672RPA19759.136Neolamprologus_brichardi
ENSCSEG00000013066rpa19680.783ENSNBRG00000020595rpa19980.783Neolamprologus_brichardi
ENSCSEG00000013066rpa19961.111ENSNLEG00000017149RPA19961.275Nomascus_leucogenys
ENSCSEG00000013066rpa19752.277ENSMEUG00000006714RPA19852.277Notamacropus_eugenii
ENSCSEG00000013066rpa19659.365ENSODEG00000009038RPA19759.365Octodon_degus
ENSCSEG00000013066rpa19979.612ENSONIG00000013135rpa19979.612Oreochromis_niloticus
ENSCSEG00000013066rpa19860.099ENSOANG00000010880RPA19960.099Ornithorhynchus_anatinus
ENSCSEG00000013066rpa19958.814ENSOCUG00000001504RPA19958.814Oryctolagus_cuniculus
ENSCSEG00000013066rpa19165.556ENSORLG00000003368RPA19956.615Oryzias_latipes
ENSCSEG00000013066rpa19978.843ENSORLG00000004856rpa19978.843Oryzias_latipes
ENSCSEG00000013066rpa19264.978ENSORLG00020015284RPA19955.438Oryzias_latipes_hni
ENSCSEG00000013066rpa19979.008ENSORLG00020008980rpa19979.008Oryzias_latipes_hni
ENSCSEG00000013066rpa17065.534ENSORLG00015005867-9465.534Oryzias_latipes_hsok
ENSCSEG00000013066rpa19957.524ENSORLG00015020383RPA19957.524Oryzias_latipes_hsok
ENSCSEG00000013066rpa19979.008ENSORLG00015013982rpa19979.008Oryzias_latipes_hsok
ENSCSEG00000013066rpa19659.545ENSOMEG00000011040RPA19959.545Oryzias_melastigma
ENSCSEG00000013066rpa19978.017ENSOMEG00000004704rpa19978.017Oryzias_melastigma
ENSCSEG00000013066rpa19959.967ENSOGAG00000005581-9959.967Otolemur_garnettii
ENSCSEG00000013066rpa17569.231ENSOGAG00000029379-9869.231Otolemur_garnettii
ENSCSEG00000013066rpa19961.047ENSOARG00000014479RPA19961.047Ovis_aries
ENSCSEG00000013066rpa19960.621ENSPPAG00000039680RPA19960.784Pan_paniscus
ENSCSEG00000013066rpa19959.738ENSPPRG00000011807RPA19959.738Panthera_pardus
ENSCSEG00000013066rpa19959.738ENSPTIG00000007898RPA19959.738Panthera_tigris_altaica
ENSCSEG00000013066rpa19960.948ENSPTRG00000008539RPA19961.111Pan_troglodytes
ENSCSEG00000013066rpa19960.294ENSPANG00000024592RPA19960.685Papio_anubis
ENSCSEG00000013066rpa19971.875ENSPKIG00000008053rpa19872.204Paramormyrops_kingsleyae
ENSCSEG00000013066rpa19761.383ENSPSIG00000015617RPA19861.383Pelodiscus_sinensis
ENSCSEG00000013066rpa19958.264ENSPMGG00000000543RPA19961.580Periophthalmus_magnuspinnatus
ENSCSEG00000013066rpa19979.553ENSPMGG00000011589rpa19979.553Periophthalmus_magnuspinnatus
ENSCSEG00000013066rpa19961.084ENSPEMG00000021061Rpa19961.084Peromyscus_maniculatus_bairdii
ENSCSEG00000013066rpa19959.477ENSPCIG00000019049RPA19959.935Phascolarctos_cinereus
ENSCSEG00000013066rpa110079.242ENSPFOG00000003987rpa110079.242Poecilia_formosa
ENSCSEG00000013066rpa110079.077ENSPLAG00000004984rpa110079.077Poecilia_latipinna
ENSCSEG00000013066rpa19458.049ENSPLAG00000008844-9658.049Poecilia_latipinna
ENSCSEG00000013066rpa19457.236ENSPMEG00000003627-9657.886Poecilia_mexicana
ENSCSEG00000013066rpa110079.407ENSPMEG00000020602rpa110079.407Poecilia_mexicana
ENSCSEG00000013066rpa19369.108ENSPREG00000010119RPA19169.108Poecilia_reticulata
ENSCSEG00000013066rpa19371.454ENSPREG00000010174rpa19670.415Poecilia_reticulata
ENSCSEG00000013066rpa19961.111ENSPCOG00000001799RPA19961.111Propithecus_coquereli
ENSCSEG00000013066rpa19960.685ENSPVAG00000002149RPA19960.685Pteropus_vampyrus
ENSCSEG00000013066rpa19960.472ENSPNYG00000024165RPA19960.472Pundamilia_nyererei
ENSCSEG00000013066rpa19981.518ENSPNYG00000016316rpa19981.518Pundamilia_nyererei
ENSCSEG00000013066rpa19964.725ENSPNAG00000008599rpa19963.295Pygocentrus_nattereri
ENSCSEG00000013066rpa19864.563ENSRNOG00000003123Rpa19962.069Rattus_norvegicus
ENSCSEG00000013066rpa19960.522ENSRBIG00000036587RPA19960.522Rhinopithecus_bieti
ENSCSEG00000013066rpa19955.954ENSRROG00000043278RPA19955.954Rhinopithecus_roxellana
ENSCSEG00000013066rpa19730.293YAR007CRFA19730.293Saccharomyces_cerevisiae
ENSCSEG00000013066rpa19161.497ENSSBOG00000030233RPA19761.497Saimiri_boliviensis_boliviensis
ENSCSEG00000013066rpa19959.738ENSSHAG00000007969RPA19860.784Sarcophilus_harrisii
ENSCSEG00000013066rpa19974.794ENSSFOG00015005362rpa19274.794Scleropages_formosus
ENSCSEG00000013066rpa19169.615ENSSMAG00000019746RPA19956.925Scophthalmus_maximus
ENSCSEG00000013066rpa19269.444ENSSDUG00000016358RPA19965.010Seriola_dumerili
ENSCSEG00000013066rpa110080.725ENSSDUG00000011949rpa110080.725Seriola_dumerili
ENSCSEG00000013066rpa19269.213ENSSLDG00000020784RPA18568.552Seriola_lalandi_dorsalis
ENSCSEG00000013066rpa110080.560ENSSLDG00000011806rpa110080.560Seriola_lalandi_dorsalis
ENSCSEG00000013066rpa19849.917ENSSARG00000007506RPA19949.917Sorex_araneus
ENSCSEG00000013066rpa19760.304ENSSPUG00000007223RPA19860.304Sphenodon_punctatus
ENSCSEG00000013066rpa19962.457ENSSPAG00000011165RPA19962.457Stegastes_partitus
ENSCSEG00000013066rpa110079.572ENSSPAG00000009903rpa110079.572Stegastes_partitus
ENSCSEG00000013066rpa19960.561ENSSSCG00000017822RPA19961.296Sus_scrofa
ENSCSEG00000013066rpa19958.891ENSTGUG00000005775RPA19958.891Taeniopygia_guttata
ENSCSEG00000013066rpa110076.606ENSTRUG00000003616rpa110076.606Takifugu_rubripes
ENSCSEG00000013066rpa19167.371ENSTRUG00000000405RPA17966.743Takifugu_rubripes
ENSCSEG00000013066rpa110077.670ENSTNIG00000016199rpa19978.084Tetraodon_nigroviridis
ENSCSEG00000013066rpa17466.590ENSTBEG00000002709RPA17466.136Tupaia_belangeri
ENSCSEG00000013066rpa19960.098ENSTTRG00000001169RPA19961.047Tursiops_truncatus
ENSCSEG00000013066rpa18872.000ENSUAMG00000015676RPA19672.000Ursus_americanus
ENSCSEG00000013066rpa19960.098ENSUMAG00000009328RPA19960.294Ursus_maritimus
ENSCSEG00000013066rpa19958.979ENSVPAG00000009443RPA19958.979Vicugna_pacos
ENSCSEG00000013066rpa19960.586ENSVVUG00000021715RPA19960.912Vulpes_vulpes
ENSCSEG00000013066rpa19962.783ENSXETG00000013538rpa19964.484Xenopus_tropicalis
ENSCSEG00000013066rpa19577.739ENSXCOG00000010068rpa19677.739Xiphophorus_couchianus
ENSCSEG00000013066rpa19760.885ENSXCOG00000009899-9960.885Xiphophorus_couchianus
ENSCSEG00000013066rpa19369.108ENSXMAG00000010333RPA18869.108Xiphophorus_maculatus
ENSCSEG00000013066rpa110078.583ENSXMAG00000004102rpa110079.292Xiphophorus_maculatus

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