EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000013280 (Gene tree)
Gene ID: 103392282
Gene Symbol: si:ch1073-55a19.2
Alias: -
Full Name: E3 SUMO-protein ligase RanBP2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 23198 bases
Position: chr16:14627379-14650576
Accession: 103392282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000020800	zf-RanBP	PF00641.18	5.5e-38	1	5
ENSCSEP00000020800	zf-RanBP	PF00641.18	5.5e-38	2	5
ENSCSEP00000020800	zf-RanBP	PF00641.18	5.5e-38	3	5
ENSCSEP00000020800	zf-RanBP	PF00641.18	5.5e-38	4	5
ENSCSEP00000020800	zf-RanBP	PF00641.18	5.5e-38	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000021068	-	13988	XM_017039654	ENSCSEP00000020800	3022 (aa)	XP_024919577	UPI000D62ED18

Gene Model

Click here to download ENSCSEG00000013280's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000013280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000013280	si:ch1073-55a19.2	100	57.037	ENSG00000153201	RANBP2	100	50.920	Homo_sapiens
ENSCSEG00000013280	si:ch1073-55a19.2	100	74.340	ENSAPOG00000017146	si:ch1073-55a19.2	100	74.046	Acanthochromis_polyacanthus
ENSCSEG00000013280	si:ch1073-55a19.2	99	48.169	ENSAMEG00000013078	RANBP2	100	48.138	Ailuropoda_melanoleuca
ENSCSEG00000013280	si:ch1073-55a19.2	100	68.269	ENSACIG00000001203	si:ch1073-55a19.2	100	82.051	Amphilophus_citrinellus
ENSCSEG00000013280	si:ch1073-55a19.2	100	74.576	ENSAPEG00000012495	si:ch1073-55a19.2	100	74.446	Amphiprion_percula
ENSCSEG00000013280	si:ch1073-55a19.2	100	73.235	ENSATEG00000001716	si:ch1073-55a19.2	100	73.063	Anabas_testudineus
ENSCSEG00000013280	si:ch1073-55a19.2	95	48.524	ENSACAG00000002091	RANBP2	100	48.937	Anolis_carolinensis
ENSCSEG00000013280	si:ch1073-55a19.2	100	47.906	ENSANAG00000023124	RANBP2	100	46.911	Aotus_nancymaae
ENSCSEG00000013280	si:ch1073-55a19.2	100	71.834	ENSACLG00000020500	si:ch1073-55a19.2	100	71.899	Astatotilapia_calliptera
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.684	ENSBTAG00000000152	RANBP2	100	48.220	Bos_taurus
ENSCSEG00000013280	si:ch1073-55a19.2	100	56.296	ENSCJAG00000001189	RANBP2	100	54.286	Callithrix_jacchus
ENSCSEG00000013280	si:ch1073-55a19.2	99	72.549	ENSCAFG00000023061	RANBP2	100	72.549	Canis_familiaris
ENSCSEG00000013280	si:ch1073-55a19.2	100	57.037	ENSCAFG00020009314	RANBP2	100	55.000	Canis_lupus_dingo
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.900	ENSCHIG00000012686	RANBP2	100	48.714	Capra_hircus
ENSCSEG00000013280	si:ch1073-55a19.2	99	48.623	ENSTSYG00000001656	RANBP2	100	54.967	Carlito_syrichta
ENSCSEG00000013280	si:ch1073-55a19.2	98	57.037	ENSCAPG00000010687	RANBP2	100	53.571	Cavia_aperea
ENSCSEG00000013280	si:ch1073-55a19.2	100	47.924	ENSCPOG00000000392	RANBP2	61	49.051	Cavia_porcellus
ENSCSEG00000013280	si:ch1073-55a19.2	100	55.639	ENSCCAG00000028166	RANBP2	100	54.286	Cebus_capucinus
ENSCSEG00000013280	si:ch1073-55a19.2	100	57.037	ENSCATG00000032597	RANBP2	100	55.000	Cercocebus_atys
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.782	ENSCLAG00000010533	RANBP2	100	49.189	Chinchilla_lanigera
ENSCSEG00000013280	si:ch1073-55a19.2	100	57.037	ENSCSAG00000017019	RANBP2	100	55.000	Chlorocebus_sabaeus
ENSCSEG00000013280	si:ch1073-55a19.2	62	68.000	ENSCHOG00000012659	-	58	68.000	Choloepus_hoffmanni
ENSCSEG00000013280	si:ch1073-55a19.2	100	50.078	ENSCPBG00000006985	RANBP2	100	50.981	Chrysemys_picta_bellii
ENSCSEG00000013280	si:ch1073-55a19.2	97	48.294	ENSCANG00000041469	RANBP2	100	48.164	Colobus_angolensis_palliatus
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.863	ENSCGRG00001000642	Ranbp2	100	48.129	Cricetulus_griseus_chok1gshd
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.443	ENSCGRG00000008995	Ranbp2	100	47.858	Cricetulus_griseus_crigri
ENSCSEG00000013280	si:ch1073-55a19.2	100	65.249	ENSCVAG00000016050	si:ch1073-55a19.2	100	67.208	Cyprinodon_variegatus
ENSCSEG00000013280	si:ch1073-55a19.2	100	53.426	ENSDARG00000093125	RANBP2	100	53.280	Danio_rerio
ENSCSEG00000013280	si:ch1073-55a19.2	99	47.396	ENSDNOG00000040501	RANBP2	99	47.428	Dasypus_novemcinctus
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.893	ENSDORG00000002206	Ranbp2	100	47.985	Dipodomys_ordii
ENSCSEG00000013280	si:ch1073-55a19.2	74	55.556	ENSETEG00000008891	-	66	55.078	Echinops_telfairi
ENSCSEG00000013280	si:ch1073-55a19.2	97	48.630	ENSEBUG00000010057	si:ch1073-55a19.2	86	46.042	Eptatretus_burgeri
ENSCSEG00000013280	si:ch1073-55a19.2	100	57.037	ENSEASG00005012918	RANBP2	99	49.751	Equus_asinus_asinus
ENSCSEG00000013280	si:ch1073-55a19.2	100	47.867	ENSECAG00000008458	RANBP2	96	50.250	Equus_caballus
ENSCSEG00000013280	si:ch1073-55a19.2	81	61.187	ENSEEUG00000007806	RANBP2	79	61.187	Erinaceus_europaeus
ENSCSEG00000013280	si:ch1073-55a19.2	98	73.995	ENSELUG00000007763	si:ch1073-55a19.2	94	70.626	Esox_lucius
ENSCSEG00000013280	si:ch1073-55a19.2	51	49.762	ENSFALG00000003519	RANBP2	99	47.909	Ficedula_albicollis
ENSCSEG00000013280	si:ch1073-55a19.2	100	47.362	ENSFDAG00000016912	RANBP2	99	47.211	Fukomys_damarensis
ENSCSEG00000013280	si:ch1073-55a19.2	100	68.532	ENSFHEG00000009774	si:ch1073-55a19.2	100	68.928	Fundulus_heteroclitus
ENSCSEG00000013280	si:ch1073-55a19.2	99	62.534	ENSGMOG00000007071	si:ch1073-55a19.2	96	62.534	Gadus_morhua
ENSCSEG00000013280	si:ch1073-55a19.2	100	69.490	ENSGAFG00000010966	si:ch1073-55a19.2	100	69.426	Gambusia_affinis
ENSCSEG00000013280	si:ch1073-55a19.2	100	72.446	ENSGACG00000006831	si:ch1073-55a19.2	100	72.446	Gasterosteus_aculeatus
ENSCSEG00000013280	si:ch1073-55a19.2	94	56.391	ENSGAGG00000025039	RANBP2	99	55.000	Gopherus_agassizii
ENSCSEG00000013280	si:ch1073-55a19.2	100	71.834	ENSHBUG00000000053	si:ch1073-55a19.2	100	71.932	Haplochromis_burtoni
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.897	ENSHGLG00000018887	RANBP2	100	47.619	Heterocephalus_glaber_female
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.612	ENSHGLG00100007365	RANBP2	100	47.451	Heterocephalus_glaber_male
ENSCSEG00000013280	si:ch1073-55a19.2	100	66.365	ENSHCOG00000019596	si:ch1073-55a19.2	100	66.710	Hippocampus_comes
ENSCSEG00000013280	si:ch1073-55a19.2	100	52.602	ENSIPUG00000019614	si:ch1073-55a19.2	100	54.257	Ictalurus_punctatus
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.050	ENSSTOG00000019518	RANBP2	100	55.000	Ictidomys_tridecemlineatus
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.064	ENSJJAG00000021292	Ranbp2	100	48.069	Jaculus_jaculus
ENSCSEG00000013280	si:ch1073-55a19.2	100	71.215	ENSKMAG00000001158	si:ch1073-55a19.2	100	71.126	Kryptolebias_marmoratus
ENSCSEG00000013280	si:ch1073-55a19.2	94	70.884	ENSLBEG00000027979	si:ch1073-55a19.2	99	70.527	Labrus_bergylta
ENSCSEG00000013280	si:ch1073-55a19.2	100	49.838	ENSLACG00000009728	RANBP2	100	49.780	Latimeria_chalumnae
ENSCSEG00000013280	si:ch1073-55a19.2	98	60.709	ENSLOCG00000010333	si:ch1073-55a19.2	100	56.917	Lepisosteus_oculatus
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.974	ENSLAFG00000000740	RANBP2	61	48.845	Loxodonta_africana
ENSCSEG00000013280	si:ch1073-55a19.2	100	57.037	ENSMFAG00000029029	RANBP2	100	55.000	Macaca_fascicularis
ENSCSEG00000013280	si:ch1073-55a19.2	100	57.037	ENSMMUG00000021019	RANBP2	100	55.000	Macaca_mulatta
ENSCSEG00000013280	si:ch1073-55a19.2	100	57.037	ENSMNEG00000043706	RANBP2	100	55.000	Macaca_nemestrina
ENSCSEG00000013280	si:ch1073-55a19.2	99	57.037	ENSMLEG00000037350	RANBP2	100	55.000	Mandrillus_leucophaeus
ENSCSEG00000013280	si:ch1073-55a19.2	100	72.092	ENSMAMG00000017900	si:ch1073-55a19.2	100	72.255	Mastacembelus_armatus
ENSCSEG00000013280	si:ch1073-55a19.2	100	71.834	ENSMZEG00005010956	si:ch1073-55a19.2	100	71.932	Maylandia_zebra
ENSCSEG00000013280	si:ch1073-55a19.2	99	47.198	ENSMGAG00000014831	-	99	46.530	Meleagris_gallopavo
ENSCSEG00000013280	si:ch1073-55a19.2	100	49.096	ENSMAUG00000013313	Ranbp2	100	48.331	Mesocricetus_auratus
ENSCSEG00000013280	si:ch1073-55a19.2	100	53.957	ENSMICG00000011864	RANBP2	100	53.957	Microcebus_murinus
ENSCSEG00000013280	si:ch1073-55a19.2	100	49.147	ENSMOCG00000012516	Ranbp2	100	48.247	Microtus_ochrogaster
ENSCSEG00000013280	si:ch1073-55a19.2	98	79.798	ENSMMOG00000005743	si:ch1073-55a19.2	99	80.563	Mola_mola
ENSCSEG00000013280	si:ch1073-55a19.2	98	52.273	ENSMODG00000002914	RANBP2	100	50.238	Monodelphis_domestica
ENSCSEG00000013280	si:ch1073-55a19.2	100	72.781	ENSMALG00000004359	si:ch1073-55a19.2	100	72.807	Monopterus_albus
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.470	ENSMUSG00000003226	Ranbp2	100	47.700	Mus_musculus
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.087	MGP_PahariEiJ_G0030751	Ranbp2	100	49.223	Mus_pahari
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.407	MGP_SPRETEiJ_G0016147	Ranbp2	100	47.638	Mus_spretus
ENSCSEG00000013280	si:ch1073-55a19.2	100	57.447	ENSMPUG00000010754	RANBP2	100	53.704	Mustela_putorius_furo
ENSCSEG00000013280	si:ch1073-55a19.2	99	47.858	ENSMLUG00000005555	RANBP2	100	47.951	Myotis_lucifugus
ENSCSEG00000013280	si:ch1073-55a19.2	100	49.158	ENSNGAG00000016154	Ranbp2	100	48.295	Nannospalax_galili
ENSCSEG00000013280	si:ch1073-55a19.2	100	71.769	ENSNBRG00000004587	si:ch1073-55a19.2	100	71.867	Neolamprologus_brichardi
ENSCSEG00000013280	si:ch1073-55a19.2	99	46.886	ENSNLEG00000007501	RANBP2	99	51.534	Nomascus_leucogenys
ENSCSEG00000013280	si:ch1073-55a19.2	91	50.332	ENSOPRG00000009720	-	93	50.166	Ochotona_princeps
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.132	ENSODEG00000013212	RANBP2	100	53.571	Octodon_degus
ENSCSEG00000013280	si:ch1073-55a19.2	100	69.662	ENSONIG00000004346	si:ch1073-55a19.2	100	69.662	Oreochromis_niloticus
ENSCSEG00000013280	si:ch1073-55a19.2	79	49.825	ENSOANG00000004894	RANBP2	69	50.523	Ornithorhynchus_anatinus
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.293	ENSOCUG00000001165	RANBP2	100	55.405	Oryctolagus_cuniculus
ENSCSEG00000013280	si:ch1073-55a19.2	100	67.978	ENSORLG00000015523	si:ch1073-55a19.2	100	64.648	Oryzias_latipes
ENSCSEG00000013280	si:ch1073-55a19.2	100	68.316	ENSORLG00020003797	si:ch1073-55a19.2	100	68.492	Oryzias_latipes_hni
ENSCSEG00000013280	si:ch1073-55a19.2	100	68.645	ENSORLG00015004994	si:ch1073-55a19.2	100	68.613	Oryzias_latipes_hsok
ENSCSEG00000013280	si:ch1073-55a19.2	100	68.478	ENSOMEG00000022969	si:ch1073-55a19.2	100	68.301	Oryzias_melastigma
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.486	ENSOGAG00000028976	RANBP2	100	47.786	Otolemur_garnettii
ENSCSEG00000013280	si:ch1073-55a19.2	99	48.783	ENSOARG00000000558	RANBP2	99	48.409	Ovis_aries
ENSCSEG00000013280	si:ch1073-55a19.2	98	67.647	ENSPANG00000000990	RANBP2	99	67.647	Papio_anubis
ENSCSEG00000013280	si:ch1073-55a19.2	94	50.000	ENSPKIG00000021054	-	99	50.617	Paramormyrops_kingsleyae
ENSCSEG00000013280	si:ch1073-55a19.2	100	56.915	ENSPKIG00000010971	RANBP2	100	57.280	Paramormyrops_kingsleyae
ENSCSEG00000013280	si:ch1073-55a19.2	99	49.308	ENSPSIG00000007182	RANBP2	60	49.972	Pelodiscus_sinensis
ENSCSEG00000013280	si:ch1073-55a19.2	93	63.889	ENSPEMG00000021565	Ranbp2	99	48.505	Peromyscus_maniculatus_bairdii
ENSCSEG00000013280	si:ch1073-55a19.2	85	47.549	ENSPMAG00000007195	si:ch1073-55a19.2	100	61.314	Petromyzon_marinus
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.823	ENSPCIG00000013912	RANBP2	100	49.245	Phascolarctos_cinereus
ENSCSEG00000013280	si:ch1073-55a19.2	100	68.730	ENSPFOG00000007377	si:ch1073-55a19.2	100	68.249	Poecilia_formosa
ENSCSEG00000013280	si:ch1073-55a19.2	100	69.164	ENSPLAG00000012373	si:ch1073-55a19.2	100	69.432	Poecilia_latipinna
ENSCSEG00000013280	si:ch1073-55a19.2	100	69.206	ENSPMEG00000005561	si:ch1073-55a19.2	100	69.432	Poecilia_mexicana
ENSCSEG00000013280	si:ch1073-55a19.2	98	81.462	ENSPREG00000013331	si:ch1073-55a19.2	98	81.462	Poecilia_reticulata
ENSCSEG00000013280	si:ch1073-55a19.2	70	51.923	ENSPPYG00000012139	-	100	51.346	Pongo_abelii
ENSCSEG00000013280	si:ch1073-55a19.2	52	56.270	ENSPPYG00000029793	-	99	56.672	Pongo_abelii
ENSCSEG00000013280	si:ch1073-55a19.2	95	62.385	ENSPCAG00000000957	RANBP2	98	62.577	Procavia_capensis
ENSCSEG00000013280	si:ch1073-55a19.2	100	56.522	ENSPCOG00000008879	RANBP2	100	55.000	Propithecus_coquereli
ENSCSEG00000013280	si:ch1073-55a19.2	99	52.662	ENSPVAG00000003883	RANBP2	93	52.667	Pteropus_vampyrus
ENSCSEG00000013280	si:ch1073-55a19.2	100	71.867	ENSPNYG00000015971	si:ch1073-55a19.2	100	71.965	Pundamilia_nyererei
ENSCSEG00000013280	si:ch1073-55a19.2	100	57.277	ENSPNAG00000026129	si:ch1073-55a19.2	100	57.968	Pygocentrus_nattereri
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.317	ENSRNOG00000000796	Ranbp2	100	48.705	Rattus_norvegicus
ENSCSEG00000013280	si:ch1073-55a19.2	100	56.296	ENSRBIG00000043515	RANBP2	100	54.286	Rhinopithecus_bieti
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.021	ENSRROG00000026113	RANBP2	100	54.286	Rhinopithecus_roxellana
ENSCSEG00000013280	si:ch1073-55a19.2	100	57.037	ENSSBOG00000035336	RANBP2	100	55.000	Saimiri_boliviensis_boliviensis
ENSCSEG00000013280	si:ch1073-55a19.2	99	49.237	ENSSHAG00000004676	RANBP2	99	49.523	Sarcophilus_harrisii
ENSCSEG00000013280	si:ch1073-55a19.2	99	59.506	ENSSFOG00015003943	-	99	59.252	Scleropages_formosus
ENSCSEG00000013280	si:ch1073-55a19.2	100	55.602	ENSSFOG00015023201	RANBP2	100	55.474	Scleropages_formosus
ENSCSEG00000013280	si:ch1073-55a19.2	100	74.569	ENSSMAG00000007331	si:ch1073-55a19.2	100	74.284	Scophthalmus_maximus
ENSCSEG00000013280	si:ch1073-55a19.2	100	75.775	ENSSDUG00000013160	si:ch1073-55a19.2	100	75.841	Seriola_dumerili
ENSCSEG00000013280	si:ch1073-55a19.2	100	71.392	ENSSLDG00000023392	si:ch1073-55a19.2	100	71.110	Seriola_lalandi_dorsalis
ENSCSEG00000013280	si:ch1073-55a19.2	89	55.752	ENSSARG00000005595	RANBP2	72	55.373	Sorex_araneus
ENSCSEG00000013280	si:ch1073-55a19.2	100	74.282	ENSSPAG00000008000	si:ch1073-55a19.2	100	74.682	Stegastes_partitus
ENSCSEG00000013280	si:ch1073-55a19.2	100	48.609	ENSSSCG00000008136	RANBP2	98	48.705	Sus_scrofa
ENSCSEG00000013280	si:ch1073-55a19.2	60	55.000	ENSTGUG00000009571	RANBP2	100	55.000	Taeniopygia_guttata
ENSCSEG00000013280	si:ch1073-55a19.2	94	55.000	ENSTTRG00000007400	RANBP2	96	55.000	Tursiops_truncatus
ENSCSEG00000013280	si:ch1073-55a19.2	94	57.037	ENSUAMG00000020025	RANBP2	98	55.000	Ursus_americanus
ENSCSEG00000013280	si:ch1073-55a19.2	96	62.087	ENSVPAG00000006676	RANBP2	86	62.087	Vicugna_pacos
ENSCSEG00000013280	si:ch1073-55a19.2	93	61.722	ENSVVUG00000014899	RANBP2	100	48.917	Vulpes_vulpes
ENSCSEG00000013280	si:ch1073-55a19.2	94	47.611	ENSXETG00000016006	ranbp2	99	47.509	Xenopus_tropicalis
ENSCSEG00000013280	si:ch1073-55a19.2	97	77.053	ENSXCOG00000000752	si:ch1073-55a19.2	99	77.053	Xiphophorus_couchianus
ENSCSEG00000013280	si:ch1073-55a19.2	98	76.812	ENSXMAG00000003519	si:ch1073-55a19.2	100	67.677	Xiphophorus_maculatus