EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000013387 (Gene tree)
Gene ID: 103381780
Gene Symbol: srsf2a
Alias: SFRS2B|SRP46
Full Name: serine and arginine rich splicing factor 2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 1071 bases
Position: chr8:6014131-6015201
Accession: 103381780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000020952	RRM_1	PF00076.22	7.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000021223	-	654	XM_008314299	ENSCSEP00000020952	217 (aa)	XP_008312521	UPI00049841C2

Gene Model

Click here to download ENSCSEG00000013387's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG
csem05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000013387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000013387	srsf2a	58	68.000	ENSAMEG00000013624	-	50	90.909	Ailuropoda_melanoleuca
ENSCSEG00000013387	srsf2a	52	99.107	ENSAOCG00000021878	srsf2a	51	99.107	Amphiprion_ocellaris
ENSCSEG00000013387	srsf2a	52	99.107	ENSAPEG00000023494	srsf2a	51	99.107	Amphiprion_percula
ENSCSEG00000013387	srsf2a	51	93.694	ENSACAG00000008553	-	51	92.857	Anolis_carolinensis
ENSCSEG00000013387	srsf2a	99	63.348	ENSCHOG00000014019	-	53	90.741	Choloepus_hoffmanni
ENSCSEG00000013387	srsf2a	52	96.429	ENSDARG00000057484	srsf2a	95	96.429	Danio_rerio
ENSCSEG00000013387	srsf2a	96	49.519	ENSDNOG00000033905	-	53	64.000	Dasypus_novemcinctus
ENSCSEG00000013387	srsf2a	70	61.184	ENSEBUG00000008729	-	58	70.339	Eptatretus_burgeri
ENSCSEG00000013387	srsf2a	50	90.826	ENSFALG00000000869	-	50	90.826	Ficedula_albicollis
ENSCSEG00000013387	srsf2a	59	71.654	ENSFDAG00000012646	-	50	92.308	Fukomys_damarensis
ENSCSEG00000013387	srsf2a	51	93.694	ENSGALG00000017357	SRSF2	51	92.857	Gallus_gallus
ENSCSEG00000013387	srsf2a	52	98.214	ENSLBEG00000027265	srsf2a	52	98.214	Labrus_bergylta
ENSCSEG00000013387	srsf2a	52	94.643	ENSLOCG00000011252	srsf2a	52	94.643	Lepisosteus_oculatus
ENSCSEG00000013387	srsf2a	53	84.483	ENSMZEG00005001748	-	50	86.607	Maylandia_zebra
ENSCSEG00000013387	srsf2a	52	98.214	ENSMMOG00000020751	srsf2a	52	98.214	Mola_mola
ENSCSEG00000013387	srsf2a	58	55.906	ENSMLUG00000026613	-	52	60.748	Myotis_lucifugus
ENSCSEG00000013387	srsf2a	71	72.258	ENSNLEG00000002547	SRSF2	52	93.750	Nomascus_leucogenys
ENSCSEG00000013387	srsf2a	56	70.312	ENSOCUG00000021840	-	51	74.336	Oryctolagus_cuniculus
ENSCSEG00000013387	srsf2a	67	60.000	ENSOARG00000018667	-	51	72.549	Ovis_aries
ENSCSEG00000013387	srsf2a	67	60.000	ENSOARG00000018359	-	51	72.549	Ovis_aries
ENSCSEG00000013387	srsf2a	99	74.091	ENSPMGG00000010911	srsf2a	55	93.860	Periophthalmus_magnuspinnatus
ENSCSEG00000013387	srsf2a	52	97.321	ENSSFOG00015003975	-	55	90.323	Scleropages_formosus
ENSCSEG00000013387	srsf2a	54	98.291	ENSSMAG00000005854	srsf2a	53	98.214	Scophthalmus_maximus
ENSCSEG00000013387	srsf2a	99	94.595	ENSSDUG00000013865	srsf2a	99	94.595	Seriola_dumerili
ENSCSEG00000013387	srsf2a	99	94.595	ENSSLDG00000017717	srsf2a	99	94.595	Seriola_lalandi_dorsalis
ENSCSEG00000013387	srsf2a	51	90.991	ENSSPUG00000007582	-	50	93.396	Sphenodon_punctatus
ENSCSEG00000013387	srsf2a	63	67.153	ENSSSCG00000012212	-	56	71.818	Sus_scrofa
ENSCSEG00000013387	srsf2a	51	93.636	ENSTGUG00000007799	-	51	91.964	Taeniopygia_guttata
ENSCSEG00000013387	srsf2a	52	89.565	ENSTRUG00000024363	srsf2b	50	89.474	Takifugu_rubripes
ENSCSEG00000013387	srsf2a	52	98.214	ENSTNIG00000001280	srsf2a	50	98.214	Tetraodon_nigroviridis
ENSCSEG00000013387	srsf2a	51	95.495	ENSXETG00000025271	srsf2	50	95.495	Xenopus_tropicalis
ENSCSEG00000013387	srsf2a	52	99.107	ENSXCOG00000005917	srsf2a	51	99.107	Xiphophorus_couchianus