EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000013400 (Gene tree)
Gene ID: 103397428
Gene Symbol: rab35b
Alias: rab35|sb:eu777|si:busm1-146n9.2|zgc:100812
Full Name: ras-related protein Rab-35
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 9009 bases
Position: chrZ:2447198-2456206
Accession: 103397428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000020972	MMR_HSR1	PF01926.23	7.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000021244	-	1346	XM_008335684	ENSCSEP00000020972	201 (aa)	XP_008333906	UPI0000E3AE15
ENSCSET00000021252	-	555	-	ENSCSEP00000020980	184 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000013400's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000013400's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000013400	rab35b	92	40.909	ENSCSEG00000020348	rab33ba	62	48.980
ENSCSEG00000013400	rab35b	96	36.715	ENSCSEG00000012961	rab34a	79	36.715
ENSCSEG00000013400	rab35b	95	37.563	ENSCSEG00000005357	-	93	37.563
ENSCSEG00000013400	rab35b	81	47.879	ENSCSEG00000011982	rab25b	93	43.069
ENSCSEG00000013400	rab35b	89	34.444	ENSCSEG00000010565	rab23	94	33.500
ENSCSEG00000013400	rab35b	99	43.128	ENSCSEG00000011996	rab11al	96	43.128
ENSCSEG00000013400	rab35b	100	39.048	ENSCSEG00000006243	zgc:101559	90	39.048
ENSCSEG00000013400	rab35b	58	84.483	ENSCSEG00000009988	si:dkey-16l2.16	89	84.483
ENSCSEG00000013400	rab35b	90	32.418	ENSCSEG00000009987	rras2	92	32.990
ENSCSEG00000013400	rab35b	79	45.679	ENSCSEG00000019722	RAB39B	78	44.578
ENSCSEG00000013400	rab35b	94	41.361	ENSCSEG00000016933	rab12	67	45.062
ENSCSEG00000013400	rab35b	90	33.152	ENSCSEG00000015770	si:cabz01085950.1	83	34.132
ENSCSEG00000013400	rab35b	86	51.429	ENSCSEG00000007292	rab30	86	51.429
ENSCSEG00000013400	rab35b	93	30.653	ENSCSEG00000014284	dnajc27	73	30.653
ENSCSEG00000013400	rab35b	82	37.278	ENSCSEG00000016611	rheb	88	37.278
ENSCSEG00000013400	rab35b	84	30.939	ENSCSEG00000003581	rasd4	85	30.939
ENSCSEG00000013400	rab35b	100	47.525	ENSCSEG00000002358	rab13	86	53.216
ENSCSEG00000013400	rab35b	84	39.655	ENSCSEG00000002970	RAB7A	78	39.655
ENSCSEG00000013400	rab35b	79	45.679	ENSCSEG00000017861	-	76	45.679
ENSCSEG00000013400	rab35b	87	46.893	ENSCSEG00000016803	rab18b	83	49.390
ENSCSEG00000013400	rab35b	71	38.776	ENSCSEG00000018133	rab34b	58	38.776
ENSCSEG00000013400	rab35b	76	37.419	ENSCSEG00000007927	hrasb	81	37.419
ENSCSEG00000013400	rab35b	76	38.961	ENSCSEG00000003122	rab6ba	74	38.961
ENSCSEG00000013400	rab35b	51	34.286	ENSCSEG00000015746	-	81	35.043
ENSCSEG00000013400	rab35b	78	66.879	ENSCSEG00000020977	-	77	66.879
ENSCSEG00000013400	rab35b	77	37.500	ENSCSEG00000003537	rhebl1	85	37.500
ENSCSEG00000013400	rab35b	95	41.117	ENSCSEG00000014479	-	62	47.682
ENSCSEG00000013400	rab35b	98	39.269	ENSCSEG00000019183	si:dkey-34d22.5	77	43.023
ENSCSEG00000013400	rab35b	85	48.538	ENSCSEG00000000205	RAB15	83	48.538
ENSCSEG00000013400	rab35b	81	32.121	ENSCSEG00000017910	-	77	32.121
ENSCSEG00000013400	rab35b	76	37.419	ENSCSEG00000005737	kras	90	35.465
ENSCSEG00000013400	rab35b	76	38.312	ENSCSEG00000016556	rab6bb	74	38.312
ENSCSEG00000013400	rab35b	61	31.200	ENSCSEG00000009845	arl5c	67	31.200
ENSCSEG00000013400	rab35b	96	42.211	ENSCSEG00000016284	rab33a	69	42.211
ENSCSEG00000013400	rab35b	98	40.000	ENSCSEG00000017026	rab25a	96	40.099
ENSCSEG00000013400	rab35b	96	37.436	ENSCSEG00000017024	rab5c	89	37.436
ENSCSEG00000013400	rab35b	76	40.260	ENSCSEG00000019797	rab22a	79	40.260
ENSCSEG00000013400	rab35b	76	39.610	ENSCSEG00000004941	rab41	73	39.610
ENSCSEG00000013400	rab35b	82	50.000	ENSCSEG00000007121	rab11ba	64	50.000
ENSCSEG00000013400	rab35b	58	30.579	ENSCSEG00000010194	-	59	30.579
ENSCSEG00000013400	rab35b	80	65.432	ENSCSEG00000014416	zgc:171927	76	65.432
ENSCSEG00000013400	rab35b	98	41.784	ENSCSEG00000010402	-	78	47.337
ENSCSEG00000013400	rab35b	88	49.718	ENSCSEG00000003768	rab15	75	49.718
ENSCSEG00000013400	rab35b	57	32.203	ENSCSEG00000014890	arl4aa	60	32.203
ENSCSEG00000013400	rab35b	97	35.468	ENSCSEG00000010116	rab9a	92	35.468
ENSCSEG00000013400	rab35b	96	30.043	ENSCSEG00000011160	rab20	97	30.043
ENSCSEG00000013400	rab35b	80	35.185	ENSCSEG00000011820	rras	82	35.185
ENSCSEG00000013400	rab35b	78	30.000	ENSCSEG00000010391	nkiras1	83	30.000
ENSCSEG00000013400	rab35b	80	63.580	ENSCSEG00000018732	rab1ba	81	63.580
ENSCSEG00000013400	rab35b	99	43.062	ENSCSEG00000012149	rab11bb	96	43.062
ENSCSEG00000013400	rab35b	57	32.203	ENSCSEG00000007479	ARL4A	59	32.203
ENSCSEG00000013400	rab35b	61	31.852	ENSCSEG00000013577	arfrp1	66	31.852
ENSCSEG00000013400	rab35b	84	38.506	ENSCSEG00000014467	rab9b	79	38.506
ENSCSEG00000013400	rab35b	99	43.564	ENSCSEG00000011816	rab18a	84	48.256
ENSCSEG00000013400	rab35b	88	44.382	ENSCSEG00000017211	rab2a	75	47.468
ENSCSEG00000013400	rab35b	79	45.912	ENSCSEG00000016498	rab14	74	45.912
ENSCSEG00000013400	rab35b	73	30.573	ENSCSEG00000020208	rasl11b	62	30.573
ENSCSEG00000013400	rab35b	99	44.175	ENSCSEG00000007383	rab11a	96	44.175
ENSCSEG00000013400	rab35b	81	43.636	ENSCSEG00000010582	rab42a	76	43.636
ENSCSEG00000013400	rab35b	99	43.062	ENSCSEG00000007239	-	76	48.795
ENSCSEG00000013400	rab35b	96	31.980	ENSCSEG00000018987	si:ch73-116o1.2	85	32.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000013400	rab35b	100	94.030	ENSG00000111737	RAB35	100	94.030	Homo_sapiens
ENSCSEG00000013400	rab35b	100	99.502	ENSAPOG00000007363	rab35b	100	99.502	Acanthochromis_polyacanthus
ENSCSEG00000013400	rab35b	100	99.502	ENSAOCG00000005934	rab35b	100	99.502	Amphiprion_ocellaris
ENSCSEG00000013400	rab35b	100	99.502	ENSAPEG00000001130	rab35b	100	99.502	Amphiprion_percula
ENSCSEG00000013400	rab35b	100	99.005	ENSATEG00000013281	rab35b	100	99.005	Anabas_testudineus
ENSCSEG00000013400	rab35b	100	94.527	ENSACAG00000003643	RAB35	100	94.527	Anolis_carolinensis
ENSCSEG00000013400	rab35b	100	94.030	ENSANAG00000036954	RAB35	100	94.030	Aotus_nancymaae
ENSCSEG00000013400	rab35b	100	93.532	ENSAMXG00000040604	-	100	93.532	Astyanax_mexicanus
ENSCSEG00000013400	rab35b	100	97.015	ENSAMXG00000039865	rab35b	100	97.015	Astyanax_mexicanus
ENSCSEG00000013400	rab35b	100	94.030	ENSBTAG00000022044	RAB35	100	94.030	Bos_taurus
ENSCSEG00000013400	rab35b	100	94.030	ENSCJAG00000008955	RAB35	100	94.030	Callithrix_jacchus
ENSCSEG00000013400	rab35b	100	94.030	ENSCAFG00020018913	RAB35	100	94.030	Canis_lupus_dingo
ENSCSEG00000013400	rab35b	100	94.030	ENSCCAG00000031720	RAB35	100	94.030	Cebus_capucinus
ENSCSEG00000013400	rab35b	100	94.030	ENSCATG00000037465	RAB35	100	94.030	Cercocebus_atys
ENSCSEG00000013400	rab35b	100	94.030	ENSCLAG00000013339	RAB35	100	94.030	Chinchilla_lanigera
ENSCSEG00000013400	rab35b	100	94.030	ENSCSAG00000002276	RAB35	100	94.030	Chlorocebus_sabaeus
ENSCSEG00000013400	rab35b	100	95.025	ENSCPBG00000012631	RAB35	100	95.025	Chrysemys_picta_bellii
ENSCSEG00000013400	rab35b	100	87.562	ENSCGRG00001023636	Rab35	100	87.562	Cricetulus_griseus_chok1gshd
ENSCSEG00000013400	rab35b	100	98.507	ENSCVAG00000012806	rab35b	100	98.507	Cyprinodon_variegatus
ENSCSEG00000013400	rab35b	100	95.025	ENSDARG00000058425	rab35b	100	95.025	Danio_rerio
ENSCSEG00000013400	rab35b	80	96.250	ENSDARG00000102078	CABZ01072548.1	82	96.250	Danio_rerio
ENSCSEG00000013400	rab35b	100	94.030	ENSDORG00000000972	Rab35	100	94.030	Dipodomys_ordii
ENSCSEG00000013400	rab35b	100	99.502	ENSELUG00000023972	rab35	100	99.502	Esox_lucius
ENSCSEG00000013400	rab35b	100	94.030	ENSFCAG00000032566	RAB35	100	94.030	Felis_catus
ENSCSEG00000013400	rab35b	92	94.565	ENSFALG00000007652	RAB35	92	90.816	Ficedula_albicollis
ENSCSEG00000013400	rab35b	100	98.010	ENSFHEG00000004891	rab35b	100	98.010	Fundulus_heteroclitus
ENSCSEG00000013400	rab35b	100	97.015	ENSGMOG00000017688	rab35b	100	97.015	Gadus_morhua
ENSCSEG00000013400	rab35b	100	94.527	ENSGALG00000007308	RAB35	100	94.527	Gallus_gallus
ENSCSEG00000013400	rab35b	100	100.000	ENSGACG00000013548	rab35b	100	100.000	Gasterosteus_aculeatus
ENSCSEG00000013400	rab35b	100	95.025	ENSGAGG00000017207	RAB35	100	95.025	Gopherus_agassizii
ENSCSEG00000013400	rab35b	100	98.507	ENSHBUG00000001416	rab35b	100	98.507	Haplochromis_burtoni
ENSCSEG00000013400	rab35b	100	94.030	ENSHGLG00000012703	RAB35	100	94.030	Heterocephalus_glaber_female
ENSCSEG00000013400	rab35b	100	94.030	ENSIPUG00000011489	Rab35	100	94.030	Ictalurus_punctatus
ENSCSEG00000013400	rab35b	100	94.527	ENSIPUG00000024622	rab35	100	94.527	Ictalurus_punctatus
ENSCSEG00000013400	rab35b	100	94.030	ENSJJAG00000010646	Rab35	100	94.030	Jaculus_jaculus
ENSCSEG00000013400	rab35b	100	99.005	ENSKMAG00000006854	rab35b	100	99.005	Kryptolebias_marmoratus
ENSCSEG00000013400	rab35b	100	100.000	ENSLBEG00000001618	rab35b	100	100.000	Labrus_bergylta
ENSCSEG00000013400	rab35b	100	80.392	ENSLACG00000018444	RAB35	100	80.392	Latimeria_chalumnae
ENSCSEG00000013400	rab35b	100	96.517	ENSLOCG00000001637	rab35b	98	96.517	Lepisosteus_oculatus
ENSCSEG00000013400	rab35b	100	94.030	ENSMFAG00000038261	RAB35	100	94.030	Macaca_fascicularis
ENSCSEG00000013400	rab35b	100	94.030	ENSMMUG00000046831	RAB35	100	94.030	Macaca_mulatta
ENSCSEG00000013400	rab35b	100	94.030	ENSMNEG00000043655	RAB35	100	94.030	Macaca_nemestrina
ENSCSEG00000013400	rab35b	100	98.507	ENSMZEG00005002918	rab35b	100	98.507	Maylandia_zebra
ENSCSEG00000013400	rab35b	92	94.565	ENSMGAG00000008922	RAB35	100	94.565	Meleagris_gallopavo
ENSCSEG00000013400	rab35b	100	94.030	ENSMAUG00000009328	Rab35	100	94.030	Mesocricetus_auratus
ENSCSEG00000013400	rab35b	100	95.025	ENSMICG00000047356	RAB35	100	95.025	Microcebus_murinus
ENSCSEG00000013400	rab35b	98	90.306	ENSMOCG00000019999	Rab35	98	90.306	Microtus_ochrogaster
ENSCSEG00000013400	rab35b	58	100.000	ENSMALG00000003479	rab35b	75	100.000	Monopterus_albus
ENSCSEG00000013400	rab35b	100	94.030	MGP_CAROLIEiJ_G0027632	Rab35	100	94.030	Mus_caroli
ENSCSEG00000013400	rab35b	100	94.030	ENSMUSG00000029518	Rab35	100	94.030	Mus_musculus
ENSCSEG00000013400	rab35b	100	94.030	MGP_PahariEiJ_G0024212	Rab35	100	94.030	Mus_pahari
ENSCSEG00000013400	rab35b	100	94.030	MGP_SPRETEiJ_G0028630	Rab35	100	94.030	Mus_spretus
ENSCSEG00000013400	rab35b	100	94.030	ENSODEG00000007219	RAB35	100	94.030	Octodon_degus
ENSCSEG00000013400	rab35b	100	98.507	ENSONIG00000015990	rab35b	100	98.507	Oreochromis_niloticus
ENSCSEG00000013400	rab35b	100	98.507	ENSORLG00000028885	rab35b	100	98.507	Oryzias_latipes
ENSCSEG00000013400	rab35b	100	98.507	ENSORLG00015010042	rab35b	100	98.507	Oryzias_latipes_hsok
ENSCSEG00000013400	rab35b	100	94.030	ENSPPRG00000013225	RAB35	100	94.030	Panthera_pardus
ENSCSEG00000013400	rab35b	100	94.030	ENSPTRG00000005524	RAB35	100	94.030	Pan_troglodytes
ENSCSEG00000013400	rab35b	100	93.069	ENSPKIG00000016213	-	100	93.069	Paramormyrops_kingsleyae
ENSCSEG00000013400	rab35b	100	96.517	ENSPKIG00000025079	rab35b	100	96.517	Paramormyrops_kingsleyae
ENSCSEG00000013400	rab35b	100	98.507	ENSPFOG00000006655	rab35b	100	98.507	Poecilia_formosa
ENSCSEG00000013400	rab35b	100	98.507	ENSPLAG00000020989	rab35b	100	98.507	Poecilia_latipinna
ENSCSEG00000013400	rab35b	100	98.507	ENSPMEG00000021947	rab35b	100	98.507	Poecilia_mexicana
ENSCSEG00000013400	rab35b	100	94.030	ENSPPYG00000005021	RAB35	100	94.030	Pongo_abelii
ENSCSEG00000013400	rab35b	100	94.527	ENSPCOG00000026153	RAB35	100	94.527	Propithecus_coquereli
ENSCSEG00000013400	rab35b	100	94.527	ENSPVAG00000003103	RAB35	100	94.527	Pteropus_vampyrus
ENSCSEG00000013400	rab35b	100	99.005	ENSPNYG00000007156	rab35b	100	99.005	Pundamilia_nyererei
ENSCSEG00000013400	rab35b	100	93.532	ENSPNAG00000014046	-	100	93.532	Pygocentrus_nattereri
ENSCSEG00000013400	rab35b	100	94.030	ENSRNOG00000022014	Rab35	100	94.030	Rattus_norvegicus
ENSCSEG00000013400	rab35b	100	96.517	ENSSFOG00015006076	rab35	100	96.517	Scleropages_formosus
ENSCSEG00000013400	rab35b	100	100.000	ENSSMAG00000000660	rab35b	100	100.000	Scophthalmus_maximus
ENSCSEG00000013400	rab35b	100	100.000	ENSSDUG00000004950	rab35b	100	100.000	Seriola_dumerili
ENSCSEG00000013400	rab35b	100	94.527	ENSSPUG00000016258	RAB35	100	94.527	Sphenodon_punctatus
ENSCSEG00000013400	rab35b	100	99.502	ENSSPAG00000008400	rab35b	100	99.502	Stegastes_partitus
ENSCSEG00000013400	rab35b	100	94.030	ENSSSCG00000033876	RAB35	100	94.030	Sus_scrofa
ENSCSEG00000013400	rab35b	100	94.030	ENSTGUG00000009359	RAB35	100	94.030	Taeniopygia_guttata
ENSCSEG00000013400	rab35b	100	99.502	ENSTRUG00000020633	rab35b	100	99.502	Takifugu_rubripes
ENSCSEG00000013400	rab35b	100	93.035	ENSXETG00000026943	rab35	100	93.035	Xenopus_tropicalis