EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000013422 (Gene tree)
Gene ID: 103384153
Gene Symbol: utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 6920 bases
Position: chr9:16006453-16013372
Accession: 103384153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000021200	U3_assoc_6	PF08640.11	3.7e-19	1	1
ENSCSEP00000021174	U3_assoc_6	PF08640.11	3.8e-19	1	1
ENSCSEP00000021207	U3_assoc_6	PF08640.11	6.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000021479	-	285	-	ENSCSEP00000021207	94 (aa)	-	-
ENSCSET00000021471	-	1716	-	ENSCSEP00000021200	571 (aa)	-	-
ENSCSET00000021447	-	1746	XM_008317555	ENSCSEP00000021174	581 (aa)	XP_008315777	-

Gene Model

Click here to download ENSCSEG00000013422's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000013422's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000013422	utp6	100	63.934	ENSG00000108651	UTP6	100	53.923	Homo_sapiens
ENSCSEG00000013422	utp6	100	97.222	ENSAPOG00000000435	utp6	100	77.181	Acanthochromis_polyacanthus
ENSCSEG00000013422	utp6	98	62.295	ENSAMEG00000005443	UTP6	99	52.508	Ailuropoda_melanoleuca
ENSCSEG00000013422	utp6	100	93.443	ENSACIG00000004124	utp6	100	73.913	Amphilophus_citrinellus
ENSCSEG00000013422	utp6	100	97.222	ENSAOCG00000016812	utp6	100	77.181	Amphiprion_ocellaris
ENSCSEG00000013422	utp6	100	97.222	ENSAPEG00000023565	utp6	100	77.013	Amphiprion_percula
ENSCSEG00000013422	utp6	100	95.082	ENSATEG00000003401	utp6	100	78.859	Anabas_testudineus
ENSCSEG00000013422	utp6	91	72.222	ENSAPLG00000005821	UTP6	99	52.881	Anas_platyrhynchos
ENSCSEG00000013422	utp6	100	75.000	ENSACAG00000009472	UTP6	100	55.184	Anolis_carolinensis
ENSCSEG00000013422	utp6	100	62.295	ENSANAG00000034603	UTP6	100	54.257	Aotus_nancymaae
ENSCSEG00000013422	utp6	100	91.803	ENSACLG00000006728	utp6	100	76.756	Astatotilapia_calliptera
ENSCSEG00000013422	utp6	100	73.770	ENSAMXG00000009478	utp6	100	64.657	Astyanax_mexicanus
ENSCSEG00000013422	utp6	100	55.556	ENSBTAG00000003769	-	98	48.752	Bos_taurus
ENSCSEG00000013422	utp6	100	61.111	ENSBTAG00000015612	UTP6	100	49.750	Bos_taurus
ENSCSEG00000013422	utp6	100	62.295	ENSCJAG00000014115	UTP6	100	54.090	Callithrix_jacchus
ENSCSEG00000013422	utp6	100	62.295	ENSCAFG00000018507	UTP6	100	52.667	Canis_familiaris
ENSCSEG00000013422	utp6	100	62.295	ENSCAFG00020014678	UTP6	100	52.667	Canis_lupus_dingo
ENSCSEG00000013422	utp6	100	55.556	ENSCHIG00000009726	-	100	49.752	Capra_hircus
ENSCSEG00000013422	utp6	100	55.556	ENSCHIG00000017954	-	100	49.752	Capra_hircus
ENSCSEG00000013422	utp6	99	54.286	ENSTSYG00000002202	UTP6	99	48.911	Carlito_syrichta
ENSCSEG00000013422	utp6	86	48.249	ENSCAPG00000017595	UTP6	93	48.249	Cavia_aperea
ENSCSEG00000013422	utp6	99	65.574	ENSCPOG00000014294	UTP6	100	52.902	Cavia_porcellus
ENSCSEG00000013422	utp6	100	62.295	ENSCCAG00000033318	-	100	50.253	Cebus_capucinus
ENSCSEG00000013422	utp6	100	63.934	ENSCATG00000034868	UTP6	100	53.667	Cercocebus_atys
ENSCSEG00000013422	utp6	99	65.574	ENSCLAG00000007274	UTP6	99	53.846	Chinchilla_lanigera
ENSCSEG00000013422	utp6	100	63.934	ENSCSAG00000006595	UTP6	100	53.167	Chlorocebus_sabaeus
ENSCSEG00000013422	utp6	100	59.016	ENSCHOG00000010940	-	66	49.573	Choloepus_hoffmanni
ENSCSEG00000013422	utp6	100	77.778	ENSCPBG00000004652	UTP6	100	56.522	Chrysemys_picta_bellii
ENSCSEG00000013422	utp6	99	30.343	ENSCING00000022947	-	99	30.229	Ciona_intestinalis
ENSCSEG00000013422	utp6	73	53.521	ENSCSAVG00000011416	-	82	40.672	Ciona_savignyi
ENSCSEG00000013422	utp6	65	62.295	ENSCANG00000031141	UTP6	89	37.405	Colobus_angolensis_palliatus
ENSCSEG00000013422	utp6	99	67.213	ENSCGRG00001000046	Utp6	100	51.586	Cricetulus_griseus_chok1gshd
ENSCSEG00000013422	utp6	94	50.176	ENSCGRG00000011543	Utp6	100	50.176	Cricetulus_griseus_crigri
ENSCSEG00000013422	utp6	100	90.164	ENSCVAG00000020322	utp6	100	75.336	Cyprinodon_variegatus
ENSCSEG00000013422	utp6	100	77.049	ENSDARG00000098433	utp6	100	74.586	Danio_rerio
ENSCSEG00000013422	utp6	100	63.934	ENSDNOG00000037018	UTP6	100	53.833	Dasypus_novemcinctus
ENSCSEG00000013422	utp6	94	51.872	ENSDORG00000003843	Utp6	99	53.945	Dipodomys_ordii
ENSCSEG00000013422	utp6	65	62.295	ENSEBUG00000000334	-	96	55.000	Eptatretus_burgeri
ENSCSEG00000013422	utp6	100	62.295	ENSEASG00005010870	UTP6	100	53.500	Equus_asinus_asinus
ENSCSEG00000013422	utp6	100	62.295	ENSECAG00000022217	UTP6	100	53.500	Equus_caballus
ENSCSEG00000013422	utp6	100	85.246	ENSELUG00000006618	utp6	100	68.121	Esox_lucius
ENSCSEG00000013422	utp6	100	63.934	ENSFCAG00000015795	UTP6	100	52.261	Felis_catus
ENSCSEG00000013422	utp6	100	75.000	ENSFALG00000002282	UTP6	100	54.849	Ficedula_albicollis
ENSCSEG00000013422	utp6	99	65.574	ENSFDAG00000019506	UTP6	100	53.177	Fukomys_damarensis
ENSCSEG00000013422	utp6	100	88.889	ENSFHEG00000010373	utp6	100	73.826	Fundulus_heteroclitus
ENSCSEG00000013422	utp6	100	83.607	ENSGMOG00000011958	utp6	100	68.456	Gadus_morhua
ENSCSEG00000013422	utp6	100	69.444	ENSGALG00000003260	UTP6	100	55.184	Gallus_gallus
ENSCSEG00000013422	utp6	100	91.667	ENSGAFG00000008505	utp6	100	75.839	Gambusia_affinis
ENSCSEG00000013422	utp6	100	91.803	ENSGACG00000019424	utp6	100	74.832	Gasterosteus_aculeatus
ENSCSEG00000013422	utp6	100	72.222	ENSGAGG00000004820	UTP6	100	56.187	Gopherus_agassizii
ENSCSEG00000013422	utp6	100	52.778	ENSGGOG00000026003	-	100	43.973	Gorilla_gorilla
ENSCSEG00000013422	utp6	100	63.934	ENSGGOG00000013569	UTP6	100	54.090	Gorilla_gorilla
ENSCSEG00000013422	utp6	100	91.803	ENSHBUG00000018668	utp6	100	76.756	Haplochromis_burtoni
ENSCSEG00000013422	utp6	99	65.574	ENSHGLG00000010332	UTP6	100	53.177	Heterocephalus_glaber_female
ENSCSEG00000013422	utp6	99	49.158	ENSHGLG00000008642	-	99	49.158	Heterocephalus_glaber_female
ENSCSEG00000013422	utp6	95	49.912	ENSHGLG00100006047	-	99	49.912	Heterocephalus_glaber_male
ENSCSEG00000013422	utp6	99	65.574	ENSHGLG00100014271	-	100	50.000	Heterocephalus_glaber_male
ENSCSEG00000013422	utp6	100	94.444	ENSHCOG00000017277	utp6	100	70.134	Hippocampus_comes
ENSCSEG00000013422	utp6	100	77.049	ENSIPUG00000022587	Utp6	100	65.327	Ictalurus_punctatus
ENSCSEG00000013422	utp6	99	68.852	ENSSTOG00000015875	UTP6	100	53.255	Ictidomys_tridecemlineatus
ENSCSEG00000013422	utp6	100	88.889	ENSKMAG00000021631	utp6	100	75.839	Kryptolebias_marmoratus
ENSCSEG00000013422	utp6	100	97.222	ENSLBEG00000002115	utp6	100	77.349	Labrus_bergylta
ENSCSEG00000013422	utp6	100	86.111	ENSLACG00000017158	UTP6	100	58.431	Latimeria_chalumnae
ENSCSEG00000013422	utp6	91	61.131	ENSLOCG00000013797	utp6	91	61.131	Lepisosteus_oculatus
ENSCSEG00000013422	utp6	100	62.295	ENSLAFG00000013008	UTP6	100	53.333	Loxodonta_africana
ENSCSEG00000013422	utp6	83	46.575	ENSMFAG00000041904	-	93	46.575	Macaca_fascicularis
ENSCSEG00000013422	utp6	100	63.934	ENSMFAG00000038842	UTP6	100	53.667	Macaca_fascicularis
ENSCSEG00000013422	utp6	100	63.934	ENSMMUG00000020403	UTP6	100	53.667	Macaca_mulatta
ENSCSEG00000013422	utp6	100	63.934	ENSMNEG00000039480	UTP6	100	53.667	Macaca_nemestrina
ENSCSEG00000013422	utp6	100	63.934	ENSMLEG00000032174	UTP6	100	47.404	Mandrillus_leucophaeus
ENSCSEG00000013422	utp6	100	52.778	ENSMLEG00000039364	-	100	42.664	Mandrillus_leucophaeus
ENSCSEG00000013422	utp6	100	97.222	ENSMAMG00000002228	utp6	99	75.377	Mastacembelus_armatus
ENSCSEG00000013422	utp6	100	91.803	ENSMZEG00005023895	utp6	100	76.756	Maylandia_zebra
ENSCSEG00000013422	utp6	95	54.049	ENSMGAG00000008111	UTP6	100	54.049	Meleagris_gallopavo
ENSCSEG00000013422	utp6	99	67.213	ENSMAUG00000021895	Utp6	100	51.586	Mesocricetus_auratus
ENSCSEG00000013422	utp6	100	63.889	ENSMICG00000002632	UTP6	100	51.167	Microcebus_murinus
ENSCSEG00000013422	utp6	99	65.574	ENSMOCG00000014163	Utp6	100	52.087	Microtus_ochrogaster
ENSCSEG00000013422	utp6	100	88.298	ENSMMOG00000008653	utp6	100	88.889	Mola_mola
ENSCSEG00000013422	utp6	100	62.295	ENSMODG00000019206	UTP6	100	52.579	Monodelphis_domestica
ENSCSEG00000013422	utp6	100	91.803	ENSMALG00000021112	utp6	100	76.846	Monopterus_albus
ENSCSEG00000013422	utp6	99	67.213	MGP_CAROLIEiJ_G0016828	Utp6	100	51.987	Mus_caroli
ENSCSEG00000013422	utp6	99	67.213	ENSMUSG00000035575	Utp6	100	52.152	Mus_musculus
ENSCSEG00000013422	utp6	99	67.213	MGP_PahariEiJ_G0017965	Utp6	94	60.174	Mus_pahari
ENSCSEG00000013422	utp6	99	67.213	MGP_SPRETEiJ_G0017672	Utp6	100	51.656	Mus_spretus
ENSCSEG00000013422	utp6	100	62.295	ENSMPUG00000014581	UTP6	100	52.254	Mustela_putorius_furo
ENSCSEG00000013422	utp6	100	63.934	ENSMLUG00000016422	UTP6	100	53.333	Myotis_lucifugus
ENSCSEG00000013422	utp6	99	68.852	ENSNGAG00000015482	Utp6	100	51.490	Nannospalax_galili
ENSCSEG00000013422	utp6	100	91.803	ENSNBRG00000019714	utp6	100	76.421	Neolamprologus_brichardi
ENSCSEG00000013422	utp6	100	63.934	ENSNLEG00000011009	UTP6	100	53.846	Nomascus_leucogenys
ENSCSEG00000013422	utp6	69	76.667	ENSOPRG00000008446	-	89	56.028	Ochotona_princeps
ENSCSEG00000013422	utp6	80	60.256	ENSODEG00000011971	UTP6	99	60.256	Octodon_degus
ENSCSEG00000013422	utp6	100	91.803	ENSONIG00000018090	utp6	100	75.920	Oreochromis_niloticus
ENSCSEG00000013422	utp6	89	67.647	ENSOANG00000004279	UTP6	99	49.831	Ornithorhynchus_anatinus
ENSCSEG00000013422	utp6	99	67.213	ENSOCUG00000016980	UTP6	99	52.588	Oryctolagus_cuniculus
ENSCSEG00000013422	utp6	99	90.164	ENSORLG00000003546	utp6	64	73.950	Oryzias_latipes
ENSCSEG00000013422	utp6	99	94.286	ENSORLG00020010377	utp6	99	73.950	Oryzias_latipes_hni
ENSCSEG00000013422	utp6	99	94.286	ENSORLG00015008893	utp6	99	73.782	Oryzias_latipes_hsok
ENSCSEG00000013422	utp6	100	91.667	ENSOMEG00000017487	utp6	100	74.497	Oryzias_melastigma
ENSCSEG00000013422	utp6	87	45.865	ENSOGAG00000004511	UTP6	100	45.865	Otolemur_garnettii
ENSCSEG00000013422	utp6	100	55.556	ENSOARG00000013474	UTP6	100	49.917	Ovis_aries
ENSCSEG00000013422	utp6	100	55.556	ENSPPAG00000016895	-	100	43.952	Pan_paniscus
ENSCSEG00000013422	utp6	100	63.934	ENSPPAG00000038089	UTP6	100	54.090	Pan_paniscus
ENSCSEG00000013422	utp6	100	63.934	ENSPPRG00000001010	UTP6	100	53.667	Panthera_pardus
ENSCSEG00000013422	utp6	100	63.934	ENSPTIG00000013913	UTP6	100	53.833	Panthera_tigris_altaica
ENSCSEG00000013422	utp6	100	55.556	ENSPTRG00000044798	-	100	43.952	Pan_troglodytes
ENSCSEG00000013422	utp6	100	63.934	ENSPTRG00000008977	UTP6	100	54.090	Pan_troglodytes
ENSCSEG00000013422	utp6	100	63.934	ENSPANG00000023113	UTP6	100	51.581	Papio_anubis
ENSCSEG00000013422	utp6	99	42.470	ENSPANG00000034274	-	99	42.470	Papio_anubis
ENSCSEG00000013422	utp6	100	75.410	ENSPKIG00000004653	utp6	100	63.773	Paramormyrops_kingsleyae
ENSCSEG00000013422	utp6	100	77.778	ENSPSIG00000012435	UTP6	100	55.109	Pelodiscus_sinensis
ENSCSEG00000013422	utp6	100	94.444	ENSPMGG00000009548	utp6	100	75.671	Periophthalmus_magnuspinnatus
ENSCSEG00000013422	utp6	99	65.574	ENSPEMG00000014081	Utp6	100	51.753	Peromyscus_maniculatus_bairdii
ENSCSEG00000013422	utp6	93	41.301	ENSPMAG00000009561	utp6	100	41.301	Petromyzon_marinus
ENSCSEG00000013422	utp6	100	67.213	ENSPCIG00000029968	UTP6	86	55.259	Phascolarctos_cinereus
ENSCSEG00000013422	utp6	100	88.525	ENSPFOG00000013918	utp6	100	74.037	Poecilia_formosa
ENSCSEG00000013422	utp6	100	90.164	ENSPLAG00000017825	utp6	100	73.869	Poecilia_latipinna
ENSCSEG00000013422	utp6	100	88.525	ENSPMEG00000008133	utp6	100	74.037	Poecilia_mexicana
ENSCSEG00000013422	utp6	100	85.246	ENSPREG00000013108	utp6	99	71.477	Poecilia_reticulata
ENSCSEG00000013422	utp6	100	63.934	ENSPPYG00000008154	UTP6	100	51.419	Pongo_abelii
ENSCSEG00000013422	utp6	100	59.016	ENSPCOG00000010224	UTP6	100	51.833	Propithecus_coquereli
ENSCSEG00000013422	utp6	100	62.295	ENSPVAG00000015759	UTP6	100	49.164	Pteropus_vampyrus
ENSCSEG00000013422	utp6	100	91.803	ENSPNYG00000002290	utp6	100	76.421	Pundamilia_nyererei
ENSCSEG00000013422	utp6	100	73.770	ENSPNAG00000027370	utp6	100	63.149	Pygocentrus_nattereri
ENSCSEG00000013422	utp6	99	67.797	ENSRNOG00000014209	Utp6	100	51.159	Rattus_norvegicus
ENSCSEG00000013422	utp6	100	64.407	ENSRBIG00000020822	UTP6	100	53.500	Rhinopithecus_bieti
ENSCSEG00000013422	utp6	100	63.934	ENSRROG00000036838	UTP6	100	53.500	Rhinopithecus_roxellana
ENSCSEG00000013422	utp6	50	55.960	ENSSHAG00000018792	-	99	55.960	Sarcophilus_harrisii
ENSCSEG00000013422	utp6	100	75.410	ENSSFOG00015005978	utp6	100	65.609	Scleropages_formosus
ENSCSEG00000013422	utp6	100	97.222	ENSSMAG00000014772	utp6	100	77.517	Scophthalmus_maximus
ENSCSEG00000013422	utp6	100	95.082	ENSSDUG00000000329	utp6	100	78.188	Seriola_dumerili
ENSCSEG00000013422	utp6	100	95.082	ENSSLDG00000016724	utp6	100	77.349	Seriola_lalandi_dorsalis
ENSCSEG00000013422	utp6	99	67.213	ENSSARG00000010778	UTP6	99	46.488	Sorex_araneus
ENSCSEG00000013422	utp6	100	75.000	ENSSPUG00000005273	UTP6	100	54.682	Sphenodon_punctatus
ENSCSEG00000013422	utp6	100	91.667	ENSSPAG00000011871	utp6	99	75.503	Stegastes_partitus
ENSCSEG00000013422	utp6	100	63.934	ENSSSCG00000017745	UTP6	100	52.833	Sus_scrofa
ENSCSEG00000013422	utp6	100	75.000	ENSTGUG00000004999	UTP6	100	55.017	Taeniopygia_guttata
ENSCSEG00000013422	utp6	99	85.246	ENSTRUG00000012005	utp6	100	73.109	Takifugu_rubripes
ENSCSEG00000013422	utp6	99	91.429	ENSTNIG00000003235	utp6	100	72.605	Tetraodon_nigroviridis
ENSCSEG00000013422	utp6	99	66.102	ENSTBEG00000005388	-	67	58.564	Tupaia_belangeri
ENSCSEG00000013422	utp6	100	60.656	ENSTTRG00000009911	UTP6	100	52.912	Tursiops_truncatus
ENSCSEG00000013422	utp6	98	62.295	ENSUMAG00000015139	UTP6	99	52.676	Ursus_maritimus
ENSCSEG00000013422	utp6	100	62.295	ENSVPAG00000005782	UTP6	100	52.667	Vicugna_pacos
ENSCSEG00000013422	utp6	100	62.712	ENSVVUG00000012238	UTP6	100	52.833	Vulpes_vulpes
ENSCSEG00000013422	utp6	100	69.444	ENSXETG00000020057	utp6	100	48.403	Xenopus_tropicalis
ENSCSEG00000013422	utp6	100	88.525	ENSXCOG00000013626	utp6	96	96.667	Xiphophorus_couchianus
ENSCSEG00000013422	utp6	100	88.525	ENSXMAG00000017414	utp6	100	74.832	Xiphophorus_maculatus