EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000013505 (Gene tree)
Gene ID: 103386504
Gene Symbol: -
Alias: -
Full Name: helicase with zinc finger 2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 15330 bases
Position: chr11:13942482-13957811
Accession: 103386504
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000021197	RNB	PF00773.19	3.7e-47	1	1
ENSCSEP00000021171	RNB	PF00773.19	3.9e-47	1	1
ENSCSEP00000021242	RNB	PF00773.19	6.8e-47	1	1
ENSCSEP00000021242	ResIII	PF04851.15	5e-09	1	1
ENSCSEP00000021197	ResIII	PF04851.15	5.4e-09	1	1
ENSCSEP00000021171	ResIII	PF04851.15	5.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000021516	-	8046	-	ENSCSEP00000021242	2681 (aa)	-	-
ENSCSET00000021444	-	9790	XM_008320809	ENSCSEP00000021171	2846 (aa)	XP_008319031	UPI0004970EA7
ENSCSET00000021470	-	9688	XM_025059833	ENSCSEP00000021197	2812 (aa)	XP_024915601	UPI000D625BCB

Gene Model

Click here to download ENSCSEG00000013505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000013505's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000013505	-	99	55.928	ENSAPOG00000023564	-	99	55.928	Acanthochromis_polyacanthus
ENSCSEG00000013505	-	99	53.350	ENSACIG00000009644	-	99	53.394	Amphilophus_citrinellus
ENSCSEG00000013505	-	99	56.459	ENSAOCG00000005001	-	99	56.459	Amphiprion_ocellaris
ENSCSEG00000013505	-	99	56.425	ENSAPEG00000002204	-	99	56.425	Amphiprion_percula
ENSCSEG00000013505	-	99	65.574	ENSATEG00000002831	-	99	65.574	Anabas_testudineus
ENSCSEG00000013505	-	99	61.240	ENSACLG00000026636	-	99	61.240	Astatotilapia_calliptera
ENSCSEG00000013505	-	99	50.453	ENSCVAG00000009143	-	98	50.453	Cyprinodon_variegatus
ENSCSEG00000013505	-	90	47.784	ENSGMOG00000015715	-	100	48.521	Gadus_morhua
ENSCSEG00000013505	-	91	54.149	ENSGACG00000011518	-	99	55.262	Gasterosteus_aculeatus
ENSCSEG00000013505	-	99	61.240	ENSHBUG00000011353	-	99	61.240	Haplochromis_burtoni
ENSCSEG00000013505	-	99	54.608	ENSKMAG00000017824	-	99	54.539	Kryptolebias_marmoratus
ENSCSEG00000013505	-	99	53.194	ENSLBEG00000004602	-	99	53.153	Labrus_bergylta
ENSCSEG00000013505	-	99	56.267	ENSMAMG00000023766	-	99	56.139	Mastacembelus_armatus
ENSCSEG00000013505	-	99	61.240	ENSMZEG00005005021	-	99	61.240	Maylandia_zebra
ENSCSEG00000013505	-	99	58.973	ENSMALG00000015934	-	99	58.870	Monopterus_albus
ENSCSEG00000013505	-	99	52.733	ENSNBRG00000018910	-	99	52.833	Neolamprologus_brichardi
ENSCSEG00000013505	-	99	54.180	ENSONIG00000003110	-	99	54.325	Oreochromis_niloticus
ENSCSEG00000013505	-	99	52.247	ENSORLG00000010672	-	99	52.213	Oryzias_latipes
ENSCSEG00000013505	-	99	52.332	ENSORLG00020004477	-	99	52.298	Oryzias_latipes_hni
ENSCSEG00000013505	-	99	52.432	ENSORLG00015022035	-	99	52.397	Oryzias_latipes_hsok
ENSCSEG00000013505	-	99	51.129	ENSOMEG00000001349	-	99	51.129	Oryzias_melastigma
ENSCSEG00000013505	-	85	51.005	ENSPFOG00000001606	-	100	51.296	Poecilia_formosa
ENSCSEG00000013505	-	99	50.038	ENSPLAG00000011020	-	98	50.076	Poecilia_latipinna
ENSCSEG00000013505	-	99	54.098	ENSPMEG00000014289	-	99	54.098	Poecilia_mexicana
ENSCSEG00000013505	-	91	50.079	ENSPREG00000013870	-	100	50.633	Poecilia_reticulata
ENSCSEG00000013505	-	99	61.240	ENSPNYG00000007526	-	99	61.240	Pundamilia_nyererei
ENSCSEG00000013505	-	99	64.754	ENSSDUG00000007057	-	99	64.754	Seriola_dumerili
ENSCSEG00000013505	-	99	57.706	ENSSLDG00000020104	-	99	58.735	Seriola_lalandi_dorsalis
ENSCSEG00000013505	-	99	56.538	ENSSPAG00000003658	-	99	56.572	Stegastes_partitus
ENSCSEG00000013505	-	71	50.902	ENSTRUG00000009427	-	98	51.163	Takifugu_rubripes
ENSCSEG00000013505	-	90	50.258	ENSTNIG00000003119	-	100	51.254	Tetraodon_nigroviridis
ENSCSEG00000013505	-	99	50.054	ENSXCOG00000003833	-	100	50.090	Xiphophorus_couchianus
ENSCSEG00000013505	-	99	50.072	ENSXMAG00000009019	-	99	50.109	Xiphophorus_maculatus