EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000013519 (Gene tree)
Gene ID: 103383052
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 18299 bases
Position: chr1:17923367-17941665
Accession: 103383052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000021164	La	PF05383.17	2.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000021437	-	5954	XM_008316056	ENSCSEP00000021164	1077 (aa)	XP_008314278	UPI00049610E0

Gene Model

Click here to download ENSCSEG00000013519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000013519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000013519	larp1b	92	52.190	ENSCSEG00000016431	larp1	87	53.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000013519	larp1b	90	52.637	ENSG00000138709	LARP1B	96	54.575	Homo_sapiens
ENSCSEG00000013519	larp1b	100	75.605	ENSAPOG00000020101	larp1b	100	75.045	Acanthochromis_polyacanthus
ENSCSEG00000013519	larp1b	53	50.676	ENSAMEG00000002748	LARP1B	99	46.980	Ailuropoda_melanoleuca
ENSCSEG00000013519	larp1b	100	67.928	ENSACIG00000023890	larp1b	100	67.748	Amphilophus_citrinellus
ENSCSEG00000013519	larp1b	90	68.762	ENSAOCG00000014268	larp1b	99	68.432	Amphiprion_ocellaris
ENSCSEG00000013519	larp1b	100	76.555	ENSAPEG00000004126	larp1b	100	76.354	Amphiprion_percula
ENSCSEG00000013519	larp1b	100	78.336	ENSATEG00000017849	larp1b	100	77.605	Anabas_testudineus
ENSCSEG00000013519	larp1b	83	53.187	ENSAPLG00000010129	LARP1B	99	53.089	Anas_platyrhynchos
ENSCSEG00000013519	larp1b	84	54.517	ENSACAG00000011338	LARP1B	93	53.822	Anolis_carolinensis
ENSCSEG00000013519	larp1b	76	47.811	ENSANAG00000034618	LARP1B	83	50.922	Aotus_nancymaae
ENSCSEG00000013519	larp1b	100	74.955	ENSACLG00000011948	larp1b	100	74.505	Astatotilapia_calliptera
ENSCSEG00000013519	larp1b	86	62.772	ENSAMXG00000006805	larp1b	90	54.432	Astyanax_mexicanus
ENSCSEG00000013519	larp1b	88	54.582	ENSBTAG00000012135	LARP1B	95	45.208	Bos_taurus
ENSCSEG00000013519	larp1b	85	54.307	ENSCJAG00000003338	LARP1B	99	53.672	Callithrix_jacchus
ENSCSEG00000013519	larp1b	79	62.533	ENSCAFG00000003831	LARP1B	96	54.780	Canis_familiaris
ENSCSEG00000013519	larp1b	86	54.943	ENSCAFG00020018899	LARP1B	95	53.391	Canis_lupus_dingo
ENSCSEG00000013519	larp1b	86	53.822	ENSCHIG00000023144	LARP1B	95	52.960	Capra_hircus
ENSCSEG00000013519	larp1b	85	54.206	ENSCCAG00000021948	LARP1B	96	53.175	Cebus_capucinus
ENSCSEG00000013519	larp1b	85	52.960	ENSCATG00000013541	LARP1B	96	52.047	Cercocebus_atys
ENSCSEG00000013519	larp1b	85	53.623	ENSCSAG00000003582	LARP1B	96	53.169	Chlorocebus_sabaeus
ENSCSEG00000013519	larp1b	70	56.413	ENSCHOG00000005354	LARP1B	77	57.379	Choloepus_hoffmanni
ENSCSEG00000013519	larp1b	89	53.777	ENSCPBG00000017480	LARP1B	89	53.862	Chrysemys_picta_bellii
ENSCSEG00000013519	larp1b	85	52.124	ENSCANG00000026958	LARP1B	78	61.898	Colobus_angolensis_palliatus
ENSCSEG00000013519	larp1b	100	73.279	ENSCVAG00000005046	larp1b	100	73.098	Cyprinodon_variegatus
ENSCSEG00000013519	larp1b	82	66.442	ENSDARG00000061169	larp1b	85	60.360	Danio_rerio
ENSCSEG00000013519	larp1b	75	53.868	ENSETEG00000012497	LARP1B	72	54.599	Echinops_telfairi
ENSCSEG00000013519	larp1b	85	45.796	ENSEBUG00000003668	larp1b	92	45.946	Eptatretus_burgeri
ENSCSEG00000013519	larp1b	85	53.608	ENSEASG00005018106	LARP1B	99	50.854	Equus_asinus_asinus
ENSCSEG00000013519	larp1b	87	53.963	ENSECAG00000001088	LARP1B	84	52.959	Equus_caballus
ENSCSEG00000013519	larp1b	63	64.356	ENSELUG00000023774	larp1b	99	63.080	Esox_lucius
ENSCSEG00000013519	larp1b	50	49.091	ENSFCAG00000014650	-	97	45.273	Felis_catus
ENSCSEG00000013519	larp1b	86	49.949	ENSFALG00000008098	LARP1B	95	53.055	Ficedula_albicollis
ENSCSEG00000013519	larp1b	100	73.807	ENSFHEG00000010264	larp1b	97	73.267	Fundulus_heteroclitus
ENSCSEG00000013519	larp1b	88	69.355	ENSGMOG00000005207	larp1b	85	76.866	Gadus_morhua
ENSCSEG00000013519	larp1b	87	53.367	ENSGALG00000010207	LARP1B	90	52.971	Gallus_gallus
ENSCSEG00000013519	larp1b	84	80.132	ENSGAFG00000012012	larp1b	99	77.702	Gambusia_affinis
ENSCSEG00000013519	larp1b	100	66.608	ENSGACG00000004609	larp1b	100	66.171	Gasterosteus_aculeatus
ENSCSEG00000013519	larp1b	93	52.807	ENSGAGG00000017209	LARP1B	88	54.370	Gopherus_agassizii
ENSCSEG00000013519	larp1b	85	53.631	ENSGGOG00000015900	LARP1B	96	54.458	Gorilla_gorilla
ENSCSEG00000013519	larp1b	100	74.932	ENSHBUG00000009730	larp1b	100	74.842	Haplochromis_burtoni
ENSCSEG00000013519	larp1b	63	79.395	ENSHCOG00000000918	larp1b	95	80.861	Hippocampus_comes
ENSCSEG00000013519	larp1b	71	68.107	ENSIPUG00000012138	larp1b	82	60.146	Ictalurus_punctatus
ENSCSEG00000013519	larp1b	98	73.346	ENSKMAG00000011589	larp1b	99	72.134	Kryptolebias_marmoratus
ENSCSEG00000013519	larp1b	100	75.837	ENSLBEG00000005655	larp1b	100	76.833	Labrus_bergylta
ENSCSEG00000013519	larp1b	93	56.341	ENSLACG00000015247	LARP1B	90	57.087	Latimeria_chalumnae
ENSCSEG00000013519	larp1b	89	57.393	ENSLOCG00000010684	larp1b	93	57.830	Lepisosteus_oculatus
ENSCSEG00000013519	larp1b	85	54.102	ENSMFAG00000002218	LARP1B	96	53.125	Macaca_fascicularis
ENSCSEG00000013519	larp1b	85	54.102	ENSMMUG00000021347	LARP1B	96	53.125	Macaca_mulatta
ENSCSEG00000013519	larp1b	63	59.610	ENSMNEG00000030406	LARP1B	80	61.111	Macaca_nemestrina
ENSCSEG00000013519	larp1b	85	52.544	ENSMLEG00000009306	LARP1B	77	62.181	Mandrillus_leucophaeus
ENSCSEG00000013519	larp1b	99	76.282	ENSMAMG00000000081	larp1b	99	78.002	Mastacembelus_armatus
ENSCSEG00000013519	larp1b	69	78.856	ENSMZEG00005002545	larp1b	95	78.439	Maylandia_zebra
ENSCSEG00000013519	larp1b	82	50.265	ENSMGAG00000004809	LARP1B	99	50.265	Meleagris_gallopavo
ENSCSEG00000013519	larp1b	85	55.335	ENSMICG00000036111	LARP1B	96	54.723	Microcebus_murinus
ENSCSEG00000013519	larp1b	88	54.519	ENSMODG00000012300	LARP1B	86	53.333	Monodelphis_domestica
ENSCSEG00000013519	larp1b	100	76.916	ENSMALG00000003638	larp1b	100	76.825	Monopterus_albus
ENSCSEG00000013519	larp1b	88	55.102	ENSMPUG00000017365	LARP1B	84	54.303	Mustela_putorius_furo
ENSCSEG00000013519	larp1b	84	53.750	ENSMLUG00000010229	LARP1B	99	52.341	Myotis_lucifugus
ENSCSEG00000013519	larp1b	87	73.770	ENSNBRG00000023846	larp1b	100	71.588	Neolamprologus_brichardi
ENSCSEG00000013519	larp1b	85	53.057	ENSNLEG00000013819	LARP1B	96	52.366	Nomascus_leucogenys
ENSCSEG00000013519	larp1b	60	58.419	ENSMEUG00000010308	LARP1B	73	58.493	Notamacropus_eugenii
ENSCSEG00000013519	larp1b	74	51.671	ENSOPRG00000005478	LARP1B	87	52.375	Ochotona_princeps
ENSCSEG00000013519	larp1b	88	77.071	ENSONIG00000012386	larp1b	99	75.918	Oreochromis_niloticus
ENSCSEG00000013519	larp1b	83	53.548	ENSOCUG00000013330	LARP1B	94	51.732	Oryctolagus_cuniculus
ENSCSEG00000013519	larp1b	93	78.982	ENSORLG00000017954	larp1b	100	77.347	Oryzias_latipes
ENSCSEG00000013519	larp1b	98	71.677	ENSORLG00020013081	larp1b	100	70.477	Oryzias_latipes_hni
ENSCSEG00000013519	larp1b	95	79.049	ENSORLG00015009580	larp1b	100	77.820	Oryzias_latipes_hsok
ENSCSEG00000013519	larp1b	97	74.652	ENSOMEG00000004210	larp1b	100	74.031	Oryzias_melastigma
ENSCSEG00000013519	larp1b	83	55.987	ENSOGAG00000005771	LARP1B	100	54.320	Otolemur_garnettii
ENSCSEG00000013519	larp1b	84	54.517	ENSOARG00000015300	LARP1B	96	53.341	Ovis_aries
ENSCSEG00000013519	larp1b	85	53.734	ENSPPAG00000030439	LARP1B	96	54.565	Pan_paniscus
ENSCSEG00000013519	larp1b	50	49.091	ENSPPRG00000002743	-	97	45.273	Panthera_pardus
ENSCSEG00000013519	larp1b	50	49.091	ENSPTIG00000011225	LARP1B	97	45.273	Panthera_tigris_altaica
ENSCSEG00000013519	larp1b	85	53.838	ENSPTRG00000016437	LARP1B	96	54.458	Pan_troglodytes
ENSCSEG00000013519	larp1b	85	54.102	ENSPANG00000012488	LARP1B	96	53.125	Papio_anubis
ENSCSEG00000013519	larp1b	77	61.686	ENSPKIG00000014360	larp1b	93	52.519	Paramormyrops_kingsleyae
ENSCSEG00000013519	larp1b	87	54.711	ENSPSIG00000012885	LARP1B	99	53.815	Pelodiscus_sinensis
ENSCSEG00000013519	larp1b	73	73.552	ENSPMGG00000007207	larp1b	87	76.881	Periophthalmus_magnuspinnatus
ENSCSEG00000013519	larp1b	60	54.986	ENSPMAG00000002700	larp1b	96	47.639	Petromyzon_marinus
ENSCSEG00000013519	larp1b	73	68.352	ENSPCIG00000026516	LARP1B	90	63.793	Phascolarctos_cinereus
ENSCSEG00000013519	larp1b	100	72.432	ENSPFOG00000019519	larp1b	100	71.617	Poecilia_formosa
ENSCSEG00000013519	larp1b	63	68.688	ENSPFOG00000022837	-	99	68.547	Poecilia_formosa
ENSCSEG00000013519	larp1b	100	74.167	ENSPLAG00000007115	larp1b	100	73.357	Poecilia_latipinna
ENSCSEG00000013519	larp1b	100	73.968	ENSPMEG00000001224	larp1b	100	73.429	Poecilia_mexicana
ENSCSEG00000013519	larp1b	83	52.497	ENSPCAG00000007546	LARP1B	96	52.432	Procavia_capensis
ENSCSEG00000013519	larp1b	85	43.640	ENSPCOG00000021874	LARP1B	95	69.369	Propithecus_coquereli
ENSCSEG00000013519	larp1b	84	50.318	ENSPVAG00000005373	LARP1B	96	50.654	Pteropus_vampyrus
ENSCSEG00000013519	larp1b	69	79.789	ENSPNYG00000017357	larp1b	95	78.496	Pundamilia_nyererei
ENSCSEG00000013519	larp1b	86	69.284	ENSPNAG00000008823	larp1b	86	63.341	Pygocentrus_nattereri
ENSCSEG00000013519	larp1b	50	48.545	ENSRBIG00000039982	-	97	45.091	Rhinopithecus_bieti
ENSCSEG00000013519	larp1b	85	53.998	ENSRROG00000030771	LARP1B	96	53.125	Rhinopithecus_roxellana
ENSCSEG00000013519	larp1b	62	50.070	ENSSHAG00000014474	LARP1B	99	49.510	Sarcophilus_harrisii
ENSCSEG00000013519	larp1b	85	83.658	ENSSMAG00000006347	larp1b	99	80.444	Scophthalmus_maximus
ENSCSEG00000013519	larp1b	100	77.187	ENSSDUG00000004182	larp1b	100	76.778	Seriola_dumerili
ENSCSEG00000013519	larp1b	89	76.902	ENSSLDG00000014613	larp1b	99	75.895	Seriola_lalandi_dorsalis
ENSCSEG00000013519	larp1b	83	54.989	ENSSPUG00000011837	LARP1B	98	54.893	Sphenodon_punctatus
ENSCSEG00000013519	larp1b	95	78.585	ENSSPAG00000017772	larp1b	100	76.481	Stegastes_partitus
ENSCSEG00000013519	larp1b	90	52.461	ENSSSCG00000034280	LARP1B	98	80.460	Sus_scrofa
ENSCSEG00000013519	larp1b	65	60.055	ENSTGUG00000002098	-	80	62.099	Taeniopygia_guttata
ENSCSEG00000013519	larp1b	95	75.412	ENSTRUG00000005612	larp1b	99	76.650	Takifugu_rubripes
ENSCSEG00000013519	larp1b	88	73.579	ENSTNIG00000012398	larp1b	99	75.067	Tetraodon_nigroviridis
ENSCSEG00000013519	larp1b	59	50.370	ENSTBEG00000004177	LARP1B	65	59.406	Tupaia_belangeri
ENSCSEG00000013519	larp1b	76	53.961	ENSTTRG00000012984	LARP1B	88	53.635	Tursiops_truncatus
ENSCSEG00000013519	larp1b	86	54.745	ENSUMAG00000007373	LARP1B	94	55.700	Ursus_maritimus
ENSCSEG00000013519	larp1b	63	55.042	ENSVPAG00000007223	LARP1B	76	55.085	Vicugna_pacos
ENSCSEG00000013519	larp1b	86	55.010	ENSVVUG00000011307	LARP1B	99	52.857	Vulpes_vulpes
ENSCSEG00000013519	larp1b	89	50.966	ENSXETG00000022512	larp1b	90	53.158	Xenopus_tropicalis
ENSCSEG00000013519	larp1b	82	71.519	ENSXCOG00000004435	larp1b	94	71.013	Xiphophorus_couchianus
ENSCSEG00000013519	larp1b	100	73.991	ENSXMAG00000008150	larp1b	100	73.274	Xiphophorus_maculatus