EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000013549 (Gene tree)
Gene ID: -
Gene Symbol: msi2a (1 of many)
Alias: -
Full Name: musashi RNA-binding protein 2a
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 28084 bases
Position: chr19:11288156-11316239
Accession: ZDB-GENE-030826-25
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000021219	RRM_1	PF00076.22	2.4e-24	1	2
ENSCSEP00000021219	RRM_1	PF00076.22	2.4e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000021493	-	915	-	ENSCSEP00000021219	177 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000013549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000013549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000013549	msi2a	68	44.715	ENSCSEG00000007589	hnrnpa1a	63	44.715
ENSCSEG00000013549	msi2a	80	47.518	ENSCSEG00000010909	hnrnpd	58	47.518
ENSCSEG00000013549	msi2a	77	46.715	ENSCSEG00000011636	hnrnpaba	61	50.000
ENSCSEG00000013549	msi2a	77	72.993	ENSCSEG00000005834	-	54	72.993
ENSCSEG00000013549	msi2a	66	33.613	ENSCSEG00000014051	-	70	33.613
ENSCSEG00000013549	msi2a	68	34.146	ENSCSEG00000003421	hnrnpa0b	53	34.146
ENSCSEG00000013549	msi2a	100	67.222	ENSCSEG00000003266	-	58	88.321
ENSCSEG00000013549	msi2a	68	42.276	ENSCSEG00000005613	HNRNPA3	54	42.276
ENSCSEG00000013549	msi2a	77	76.471	ENSCSEG00000008352	-	57	76.471
ENSCSEG00000013549	msi2a	82	63.514	ENSCSEG00000011032	MSI1	53	63.514
ENSCSEG00000013549	msi2a	71	47.200	ENSCSEG00000010345	-	60	46.825

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000013549	msi2a	100	73.913	ENSG00000153944	MSI2	92	87.912	Homo_sapiens
ENSCSEG00000013549	msi2a	100	77.596	ENSAPOG00000001658	msi2a	61	77.596	Acanthochromis_polyacanthus
ENSCSEG00000013549	msi2a	88	73.006	ENSAMEG00000002697	MSI2	55	73.006	Ailuropoda_melanoleuca
ENSCSEG00000013549	msi2a	77	86.131	ENSAOCG00000014822	msi2a	63	86.131	Amphiprion_ocellaris
ENSCSEG00000013549	msi2a	100	77.596	ENSAPEG00000007706	msi2a	54	77.596	Amphiprion_percula
ENSCSEG00000013549	msi2a	88	66.917	ENSATEG00000003301	-	50	66.917	Anabas_testudineus
ENSCSEG00000013549	msi2a	100	77.596	ENSATEG00000010498	msi2a	61	77.596	Anabas_testudineus
ENSCSEG00000013549	msi2a	100	73.913	ENSANAG00000037827	MSI2	67	73.006	Aotus_nancymaae
ENSCSEG00000013549	msi2a	100	77.596	ENSACLG00000007752	msi2a	61	77.596	Astatotilapia_calliptera
ENSCSEG00000013549	msi2a	100	75.543	ENSAMXG00000032796	msi2a	57	75.543	Astyanax_mexicanus
ENSCSEG00000013549	msi2a	100	75.543	ENSAMXG00000010474	msi2b	55	73.620	Astyanax_mexicanus
ENSCSEG00000013549	msi2a	100	71.196	ENSBTAG00000004406	MSI2	58	71.196	Bos_taurus
ENSCSEG00000013549	msi2a	77	63.971	WBGene00003423	msi-1	57	63.971	Caenorhabditis_elegans
ENSCSEG00000013549	msi2a	100	73.913	ENSCJAG00000013998	MSI2	67	73.006	Callithrix_jacchus
ENSCSEG00000013549	msi2a	88	70.068	ENSCAFG00020025620	MSI2	53	69.427	Canis_lupus_dingo
ENSCSEG00000013549	msi2a	100	71.739	ENSCHIG00000016580	MSI2	61	71.739	Capra_hircus
ENSCSEG00000013549	msi2a	88	59.420	ENSCPOG00000034042	MSI2	54	59.420	Cavia_porcellus
ENSCSEG00000013549	msi2a	100	73.913	ENSCCAG00000033927	MSI2	67	73.006	Cebus_capucinus
ENSCSEG00000013549	msi2a	94	73.988	ENSCATG00000040879	MSI2	67	73.006	Cercocebus_atys
ENSCSEG00000013549	msi2a	100	73.913	ENSCLAG00000014325	MSI2	87	84.821	Chinchilla_lanigera
ENSCSEG00000013549	msi2a	100	73.913	ENSCSAG00000005633	MSI2	61	73.913	Chlorocebus_sabaeus
ENSCSEG00000013549	msi2a	64	74.000	ENSCHOG00000008660	MSI2	55	74.000	Choloepus_hoffmanni
ENSCSEG00000013549	msi2a	88	65.854	ENSCPBG00000009942	MSI2	58	65.854	Chrysemys_picta_bellii
ENSCSEG00000013549	msi2a	90	54.598	ENSCSAVG00000010397	-	62	66.929	Ciona_savignyi
ENSCSEG00000013549	msi2a	88	73.006	ENSCANG00000036414	MSI2	67	73.006	Colobus_angolensis_palliatus
ENSCSEG00000013549	msi2a	100	73.370	ENSCGRG00001013330	Msi2	74	86.792	Cricetulus_griseus_chok1gshd
ENSCSEG00000013549	msi2a	88	73.006	ENSCGRG00000003141	Msi2	50	73.006	Cricetulus_griseus_crigri
ENSCSEG00000013549	msi2a	100	77.596	ENSCVAG00000017075	msi2a	61	77.596	Cyprinodon_variegatus
ENSCSEG00000013549	msi2a	100	76.630	ENSDARG00000032614	msi2b	100	94.186	Danio_rerio
ENSCSEG00000013549	msi2a	88	70.139	ENSDNOG00000014501	MSI2	51	70.139	Dasypus_novemcinctus
ENSCSEG00000013549	msi2a	64	92.920	ENSDORG00000028440	-	100	92.920	Dipodomys_ordii
ENSCSEG00000013549	msi2a	65	78.125	FBgn0260943	Rbp6	59	78.125	Drosophila_melanogaster
ENSCSEG00000013549	msi2a	100	73.913	ENSECAG00000011435	MSI2	60	73.913	Equus_caballus
ENSCSEG00000013549	msi2a	100	75.956	ENSELUG00000011747	msi2a	61	69.714	Esox_lucius
ENSCSEG00000013549	msi2a	100	75.000	ENSELUG00000001361	msi2b	81	92.701	Esox_lucius
ENSCSEG00000013549	msi2a	100	73.913	ENSFCAG00000041686	MSI2	92	87.912	Felis_catus
ENSCSEG00000013549	msi2a	77	75.000	ENSFCAG00000033787	-	83	68.932	Felis_catus
ENSCSEG00000013549	msi2a	88	73.006	ENSFDAG00000016118	MSI2	55	73.006	Fukomys_damarensis
ENSCSEG00000013549	msi2a	100	77.596	ENSFHEG00000000084	msi2a	96	97.059	Fundulus_heteroclitus
ENSCSEG00000013549	msi2a	59	94.231	ENSGMOG00000007596	-	100	94.231	Gadus_morhua
ENSCSEG00000013549	msi2a	100	72.826	ENSGALG00000005567	MSI2	54	72.826	Gallus_gallus
ENSCSEG00000013549	msi2a	77	97.059	ENSGAFG00000006974	msi2a	81	97.059	Gambusia_affinis
ENSCSEG00000013549	msi2a	88	73.006	ENSGGOG00000013182	MSI2	67	73.006	Gorilla_gorilla
ENSCSEG00000013549	msi2a	100	77.596	ENSHBUG00000020800	msi2a	73	96.324	Haplochromis_burtoni
ENSCSEG00000013549	msi2a	62	88.571	ENSHGLG00000012444	MSI2	76	89.423	Heterocephalus_glaber_female
ENSCSEG00000013549	msi2a	66	90.598	ENSHGLG00100004028	-	89	90.598	Heterocephalus_glaber_male
ENSCSEG00000013549	msi2a	100	77.049	ENSHCOG00000000266	msi2a	54	77.049	Hippocampus_comes
ENSCSEG00000013549	msi2a	100	75.543	ENSIPUG00000003732	msi2b	55	75.543	Ictalurus_punctatus
ENSCSEG00000013549	msi2a	100	73.913	ENSIPUG00000021097	msi2a	61	73.913	Ictalurus_punctatus
ENSCSEG00000013549	msi2a	88	59.420	ENSSTOG00000007884	MSI2	54	59.420	Ictidomys_tridecemlineatus
ENSCSEG00000013549	msi2a	64	92.920	ENSJJAG00000009467	-	100	92.920	Jaculus_jaculus
ENSCSEG00000013549	msi2a	100	77.596	ENSKMAG00000009494	msi2a	57	77.596	Kryptolebias_marmoratus
ENSCSEG00000013549	msi2a	100	77.596	ENSLBEG00000007061	msi2a	88	97.037	Labrus_bergylta
ENSCSEG00000013549	msi2a	51	92.308	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSCSEG00000013549	msi2a	100	76.630	ENSLOCG00000004675	msi2b	100	84.553	Lepisosteus_oculatus
ENSCSEG00000013549	msi2a	88	73.006	ENSMFAG00000003775	MSI2	67	73.006	Macaca_fascicularis
ENSCSEG00000013549	msi2a	88	73.006	ENSMMUG00000002069	MSI2	67	73.006	Macaca_mulatta
ENSCSEG00000013549	msi2a	100	73.913	ENSMNEG00000045275	MSI2	67	73.006	Macaca_nemestrina
ENSCSEG00000013549	msi2a	88	73.006	ENSMLEG00000033888	MSI2	67	73.006	Mandrillus_leucophaeus
ENSCSEG00000013549	msi2a	100	73.770	ENSMAMG00000002488	-	99	91.176	Mastacembelus_armatus
ENSCSEG00000013549	msi2a	100	77.596	ENSMAMG00000010503	msi2a	87	92.958	Mastacembelus_armatus
ENSCSEG00000013549	msi2a	100	77.596	ENSMZEG00005007676	msi2a	61	77.596	Maylandia_zebra
ENSCSEG00000013549	msi2a	100	73.370	ENSMAUG00000003862	Msi2	54	73.370	Mesocricetus_auratus
ENSCSEG00000013549	msi2a	100	73.913	ENSMICG00000013598	-	67	73.006	Microcebus_murinus
ENSCSEG00000013549	msi2a	100	65.217	ENSMICG00000032913	-	61	77.660	Microcebus_murinus
ENSCSEG00000013549	msi2a	100	73.370	ENSMOCG00000005820	Msi2	54	73.370	Microtus_ochrogaster
ENSCSEG00000013549	msi2a	100	69.399	ENSMMOG00000008348	msi2a	90	86.029	Mola_mola
ENSCSEG00000013549	msi2a	100	77.596	ENSMALG00000000071	msi2a	81	95.620	Monopterus_albus
ENSCSEG00000013549	msi2a	100	73.370	MGP_CAROLIEiJ_G0016948	Msi2	100	92.920	Mus_caroli
ENSCSEG00000013549	msi2a	100	73.370	ENSMUSG00000069769	Msi2	100	92.920	Mus_musculus
ENSCSEG00000013549	msi2a	100	73.370	MGP_PahariEiJ_G0018079	Msi2	100	92.920	Mus_pahari
ENSCSEG00000013549	msi2a	100	73.370	MGP_SPRETEiJ_G0017795	Msi2	100	92.920	Mus_spretus
ENSCSEG00000013549	msi2a	88	73.006	ENSMPUG00000015377	MSI2	52	73.006	Mustela_putorius_furo
ENSCSEG00000013549	msi2a	88	72.393	ENSMLUG00000007865	MSI2	52	72.393	Myotis_lucifugus
ENSCSEG00000013549	msi2a	100	73.370	ENSNGAG00000017807	Msi2	54	73.370	Nannospalax_galili
ENSCSEG00000013549	msi2a	100	77.596	ENSNBRG00000014596	msi2a	92	97.059	Neolamprologus_brichardi
ENSCSEG00000013549	msi2a	88	70.470	ENSNLEG00000008059	MSI2	70	70.470	Nomascus_leucogenys
ENSCSEG00000013549	msi2a	100	73.913	ENSODEG00000011974	MSI2	54	73.913	Octodon_degus
ENSCSEG00000013549	msi2a	77	97.059	ENSONIG00000001972	msi2a	76	97.059	Oreochromis_niloticus
ENSCSEG00000013549	msi2a	88	73.006	ENSOCUG00000010440	MSI2	52	73.006	Oryctolagus_cuniculus
ENSCSEG00000013549	msi2a	100	77.596	ENSORLG00000009671	msi2a	61	77.596	Oryzias_latipes
ENSCSEG00000013549	msi2a	100	77.596	ENSORLG00020021556	msi2a	61	77.596	Oryzias_latipes_hni
ENSCSEG00000013549	msi2a	100	77.596	ENSORLG00015004592	msi2a	61	77.596	Oryzias_latipes_hsok
ENSCSEG00000013549	msi2a	100	77.596	ENSOMEG00000000146	msi2a	61	77.596	Oryzias_melastigma
ENSCSEG00000013549	msi2a	67	90.678	ENSOGAG00000005621	MSI2	58	73.292	Otolemur_garnettii
ENSCSEG00000013549	msi2a	88	73.006	ENSPPAG00000037697	MSI2	67	73.006	Pan_paniscus
ENSCSEG00000013549	msi2a	88	73.006	ENSPPRG00000001848	MSI2	67	73.006	Panthera_pardus
ENSCSEG00000013549	msi2a	88	70.470	ENSPTIG00000021678	MSI2	61	70.470	Panthera_tigris_altaica
ENSCSEG00000013549	msi2a	81	67.692	ENSPTIG00000021873	-	85	67.692	Panthera_tigris_altaica
ENSCSEG00000013549	msi2a	88	73.006	ENSPTRG00000009437	MSI2	67	73.006	Pan_troglodytes
ENSCSEG00000013549	msi2a	100	73.913	ENSPANG00000022319	MSI2	67	73.006	Papio_anubis
ENSCSEG00000013549	msi2a	51	93.407	ENSPKIG00000017107	-	81	93.407	Paramormyrops_kingsleyae
ENSCSEG00000013549	msi2a	100	73.770	ENSPKIG00000007038	-	71	73.770	Paramormyrops_kingsleyae
ENSCSEG00000013549	msi2a	100	69.399	ENSPMGG00000005888	msi2a	55	69.399	Periophthalmus_magnuspinnatus
ENSCSEG00000013549	msi2a	64	92.920	ENSPEMG00000021793	-	100	92.920	Peromyscus_maniculatus_bairdii
ENSCSEG00000013549	msi2a	100	75.543	ENSPCIG00000006063	MSI2	53	75.543	Phascolarctos_cinereus
ENSCSEG00000013549	msi2a	59	96.190	ENSPFOG00000019337	MSI2	91	96.190	Poecilia_formosa
ENSCSEG00000013549	msi2a	79	95.683	ENSPLAG00000000436	msi2a	74	95.683	Poecilia_latipinna
ENSCSEG00000013549	msi2a	79	84.892	ENSPMEG00000013247	msi2a	77	84.892	Poecilia_mexicana
ENSCSEG00000013549	msi2a	100	77.596	ENSPREG00000000881	msi2a	55	69.399	Poecilia_reticulata
ENSCSEG00000013549	msi2a	65	93.043	ENSPCOG00000019195	-	88	93.043	Propithecus_coquereli
ENSCSEG00000013549	msi2a	88	70.470	ENSPVAG00000017053	MSI2	52	70.470	Pteropus_vampyrus
ENSCSEG00000013549	msi2a	100	77.596	ENSPNYG00000018393	msi2a	61	77.596	Pundamilia_nyererei
ENSCSEG00000013549	msi2a	100	75.543	ENSPNAG00000000844	msi2b	55	67.391	Pygocentrus_nattereri
ENSCSEG00000013549	msi2a	100	75.000	ENSPNAG00000014957	msi2a	57	75.000	Pygocentrus_nattereri
ENSCSEG00000013549	msi2a	88	67.910	ENSRNOG00000025338	Msi2	50	67.910	Rattus_norvegicus
ENSCSEG00000013549	msi2a	51	71.429	ENSRBIG00000032064	-	82	71.429	Rhinopithecus_bieti
ENSCSEG00000013549	msi2a	64	92.982	ENSRROG00000034421	-	87	92.982	Rhinopithecus_roxellana
ENSCSEG00000013549	msi2a	88	73.006	ENSSBOG00000026425	MSI2	67	73.006	Saimiri_boliviensis_boliviensis
ENSCSEG00000013549	msi2a	88	73.457	ENSSHAG00000008672	MSI2	86	63.571	Sarcophilus_harrisii
ENSCSEG00000013549	msi2a	88	72.222	ENSSFOG00015021687	-	60	72.222	Scleropages_formosus
ENSCSEG00000013549	msi2a	100	77.596	ENSSMAG00000018484	msi2a	61	77.596	Scophthalmus_maximus
ENSCSEG00000013549	msi2a	77	91.176	ENSSDUG00000021968	-	99	91.176	Seriola_dumerili
ENSCSEG00000013549	msi2a	100	77.596	ENSSDUG00000014507	msi2a	82	97.037	Seriola_dumerili
ENSCSEG00000013549	msi2a	100	77.596	ENSSLDG00000017172	msi2a	61	77.596	Seriola_lalandi_dorsalis
ENSCSEG00000013549	msi2a	51	76.923	ENSSLDG00000021332	-	68	76.923	Seriola_lalandi_dorsalis
ENSCSEG00000013549	msi2a	77	92.647	ENSSPUG00000000913	-	94	92.647	Sphenodon_punctatus
ENSCSEG00000013549	msi2a	100	77.596	ENSSPAG00000017793	msi2a	61	77.596	Stegastes_partitus
ENSCSEG00000013549	msi2a	100	73.913	ENSSSCG00000038505	MSI2	61	73.913	Sus_scrofa
ENSCSEG00000013549	msi2a	100	78.804	ENSTRUG00000021248	msi2a	71	70.157	Takifugu_rubripes
ENSCSEG00000013549	msi2a	76	75.556	ENSTBEG00000001241	MSI2	57	75.556	Tupaia_belangeri
ENSCSEG00000013549	msi2a	88	73.006	ENSUAMG00000000700	MSI2	67	73.006	Ursus_americanus
ENSCSEG00000013549	msi2a	88	67.910	ENSUMAG00000000505	MSI2	54	67.910	Ursus_maritimus
ENSCSEG00000013549	msi2a	100	87.879	ENSVVUG00000011783	MSI2	53	88.235	Vulpes_vulpes
ENSCSEG00000013549	msi2a	100	77.596	ENSXMAG00000000608	msi2a	61	77.596	Xiphophorus_maculatus