EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000013557 (Gene tree)
Gene ID: -
Gene Symbol: msi2a (1 of many)
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: musashi RNA-binding protein 2a
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 31923 bases
Position: chr19:11326570-11358492
Accession: ZDB-GENE-030826-25
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000021231	RRM_1	PF00076.22	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000021506	-	675	-	ENSCSEP00000021231	224 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000013557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000013557's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000013557	msi2a	93	60.092	ENSCSEG00000003266	-	93	60.092
ENSCSEG00000013557	msi2a	91	57.477	ENSCSEG00000011032	MSI1	92	57.477
ENSCSEG00000013557	msi2a	83	61.224	ENSCSEG00000008352	-	78	61.224
ENSCSEG00000013557	msi2a	62	36.986	ENSCSEG00000018162	dazap1	52	36.986
ENSCSEG00000013557	msi2a	83	56.279	ENSCSEG00000005834	-	98	55.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000013557	msi2a	83	74.227	ENSG00000153944	MSI2	84	69.340	Homo_sapiens
ENSCSEG00000013557	msi2a	79	93.846	ENSAPOG00000001658	msi2a	81	81.443	Acanthochromis_polyacanthus
ENSCSEG00000013557	msi2a	83	67.925	ENSAMEG00000002697	MSI2	84	69.340	Ailuropoda_melanoleuca
ENSCSEG00000013557	msi2a	83	51.550	ENSACIG00000009475	msi2a	85	51.550	Amphilophus_citrinellus
ENSCSEG00000013557	msi2a	83	80.412	ENSAPEG00000007706	msi2a	81	81.443	Amphiprion_percula
ENSCSEG00000013557	msi2a	79	93.846	ENSATEG00000010498	msi2a	81	81.443	Anabas_testudineus
ENSCSEG00000013557	msi2a	83	73.711	ENSATEG00000003301	-	90	74.742	Anabas_testudineus
ENSCSEG00000013557	msi2a	83	79.279	ENSACAG00000005452	MSI2	50	79.279	Anolis_carolinensis
ENSCSEG00000013557	msi2a	83	74.227	ENSANAG00000037827	MSI2	78	75.258	Aotus_nancymaae
ENSCSEG00000013557	msi2a	79	92.308	ENSACLG00000007752	msi2a	81	80.412	Astatotilapia_calliptera
ENSCSEG00000013557	msi2a	83	83.077	ENSAMXG00000032796	msi2a	78	74.872	Astyanax_mexicanus
ENSCSEG00000013557	msi2a	79	84.615	ENSAMXG00000010474	msi2b	81	76.289	Astyanax_mexicanus
ENSCSEG00000013557	msi2a	83	73.196	ENSBTAG00000004406	MSI2	79	74.742	Bos_taurus
ENSCSEG00000013557	msi2a	61	44.755	WBGene00003423	msi-1	57	45.255	Caenorhabditis_elegans
ENSCSEG00000013557	msi2a	83	73.711	ENSCJAG00000013998	MSI2	78	75.258	Callithrix_jacchus
ENSCSEG00000013557	msi2a	83	67.925	ENSCAFG00020025620	MSI2	69	69.340	Canis_lupus_dingo
ENSCSEG00000013557	msi2a	83	73.711	ENSCHIG00000016580	MSI2	78	75.258	Capra_hircus
ENSCSEG00000013557	msi2a	83	74.227	ENSCPOG00000034042	MSI2	69	75.258	Cavia_porcellus
ENSCSEG00000013557	msi2a	83	74.227	ENSCCAG00000033927	MSI2	78	75.258	Cebus_capucinus
ENSCSEG00000013557	msi2a	83	74.227	ENSCATG00000040879	MSI2	78	75.258	Cercocebus_atys
ENSCSEG00000013557	msi2a	83	67.925	ENSCLAG00000014325	MSI2	79	69.340	Chinchilla_lanigera
ENSCSEG00000013557	msi2a	83	73.711	ENSCSAG00000005633	MSI2	78	75.258	Chlorocebus_sabaeus
ENSCSEG00000013557	msi2a	83	80.734	ENSCPBG00000009942	MSI2	69	74.093	Chrysemys_picta_bellii
ENSCSEG00000013557	msi2a	83	74.227	ENSCANG00000036414	MSI2	84	69.340	Colobus_angolensis_palliatus
ENSCSEG00000013557	msi2a	83	73.333	ENSCGRG00001013330	Msi2	78	74.872	Cricetulus_griseus_chok1gshd
ENSCSEG00000013557	msi2a	83	67.606	ENSCGRG00000003141	Msi2	83	69.014	Cricetulus_griseus_crigri
ENSCSEG00000013557	msi2a	83	80.423	ENSCVAG00000017075	msi2a	80	79.558	Cyprinodon_variegatus
ENSCSEG00000013557	msi2a	79	84.615	ENSDARG00000032614	msi2b	85	81.481	Danio_rerio
ENSCSEG00000013557	msi2a	83	47.638	ENSDARG00000033901	msi2a	81	47.638	Danio_rerio
ENSCSEG00000013557	msi2a	83	73.711	ENSDNOG00000014501	MSI2	89	75.258	Dasypus_novemcinctus
ENSCSEG00000013557	msi2a	90	63.333	ENSDORG00000005394	Msi2	90	63.333	Dipodomys_ordii
ENSCSEG00000013557	msi2a	83	42.857	FBgn0260943	Rbp6	88	44.398	Drosophila_melanogaster
ENSCSEG00000013557	msi2a	80	43.318	ENSEBUG00000006732	msi2a	80	43.318	Eptatretus_burgeri
ENSCSEG00000013557	msi2a	83	70.588	ENSEASG00005002965	MSI2	81	61.603	Equus_asinus_asinus
ENSCSEG00000013557	msi2a	83	73.711	ENSECAG00000011435	MSI2	74	75.258	Equus_caballus
ENSCSEG00000013557	msi2a	76	69.663	ENSEEUG00000007810	MSI2	71	70.787	Erinaceus_europaeus
ENSCSEG00000013557	msi2a	83	74.742	ENSELUG00000011747	msi2a	81	75.773	Esox_lucius
ENSCSEG00000013557	msi2a	79	84.615	ENSELUG00000001361	msi2b	69	84.615	Esox_lucius
ENSCSEG00000013557	msi2a	83	73.711	ENSFCAG00000041686	MSI2	78	75.258	Felis_catus
ENSCSEG00000013557	msi2a	83	67.925	ENSFDAG00000016118	MSI2	84	69.340	Fukomys_damarensis
ENSCSEG00000013557	msi2a	79	90.769	ENSFHEG00000000084	msi2a	81	80.412	Fundulus_heteroclitus
ENSCSEG00000013557	msi2a	83	67.453	ENSGALG00000005567	MSI2	79	68.868	Gallus_gallus
ENSCSEG00000013557	msi2a	77	63.441	ENSGAFG00000006974	msi2a	80	64.516	Gambusia_affinis
ENSCSEG00000013557	msi2a	83	80.734	ENSGAGG00000016542	MSI2	91	65.455	Gopherus_agassizii
ENSCSEG00000013557	msi2a	83	74.227	ENSGGOG00000013182	MSI2	84	69.340	Gorilla_gorilla
ENSCSEG00000013557	msi2a	79	92.308	ENSHBUG00000020800	msi2a	81	80.412	Haplochromis_burtoni
ENSCSEG00000013557	msi2a	83	67.925	ENSHGLG00000012444	MSI2	67	69.340	Heterocephalus_glaber_female
ENSCSEG00000013557	msi2a	80	68.116	ENSHGLG00100003744	MSI2	100	69.565	Heterocephalus_glaber_male
ENSCSEG00000013557	msi2a	79	87.692	ENSHCOG00000000266	msi2a	59	87.692	Hippocampus_comes
ENSCSEG00000013557	msi2a	76	74.783	ENSHCOG00000017241	-	67	74.783	Hippocampus_comes
ENSCSEG00000013557	msi2a	97	66.079	ENSIPUG00000003732	msi2b	66	82.353	Ictalurus_punctatus
ENSCSEG00000013557	msi2a	76	81.651	ENSIPUG00000021097	msi2a	81	74.611	Ictalurus_punctatus
ENSCSEG00000013557	msi2a	83	74.227	ENSSTOG00000007884	MSI2	69	75.258	Ictidomys_tridecemlineatus
ENSCSEG00000013557	msi2a	80	70.854	ENSJJAG00000006292	-	100	70.854	Jaculus_jaculus
ENSCSEG00000013557	msi2a	73	88.462	ENSKMAG00000009494	msi2a	72	79.006	Kryptolebias_marmoratus
ENSCSEG00000013557	msi2a	83	51.362	ENSLBEG00000026223	-	75	51.362	Labrus_bergylta
ENSCSEG00000013557	msi2a	79	93.846	ENSLBEG00000007061	msi2a	81	81.443	Labrus_bergylta
ENSCSEG00000013557	msi2a	79	86.154	ENSLOCG00000004675	msi2b	62	86.154	Lepisosteus_oculatus
ENSCSEG00000013557	msi2a	83	74.227	ENSMFAG00000003775	MSI2	84	69.340	Macaca_fascicularis
ENSCSEG00000013557	msi2a	83	74.227	ENSMMUG00000002069	MSI2	84	69.340	Macaca_mulatta
ENSCSEG00000013557	msi2a	83	74.227	ENSMNEG00000045275	MSI2	78	75.258	Macaca_nemestrina
ENSCSEG00000013557	msi2a	83	74.227	ENSMLEG00000033888	MSI2	84	69.340	Mandrillus_leucophaeus
ENSCSEG00000013557	msi2a	79	81.538	ENSMAMG00000002488	-	77	70.103	Mastacembelus_armatus
ENSCSEG00000013557	msi2a	79	93.846	ENSMAMG00000010503	msi2a	82	81.026	Mastacembelus_armatus
ENSCSEG00000013557	msi2a	79	92.308	ENSMZEG00005007676	msi2a	81	80.412	Maylandia_zebra
ENSCSEG00000013557	msi2a	83	67.606	ENSMAUG00000003862	Msi2	79	69.014	Mesocricetus_auratus
ENSCSEG00000013557	msi2a	83	60.513	ENSMICG00000032913	-	57	62.564	Microcebus_murinus
ENSCSEG00000013557	msi2a	92	69.302	ENSMICG00000013598	-	88	70.698	Microcebus_murinus
ENSCSEG00000013557	msi2a	83	67.925	ENSMOCG00000005820	Msi2	79	69.340	Microtus_ochrogaster
ENSCSEG00000013557	msi2a	77	76.667	ENSMMOG00000008348	msi2a	89	67.157	Mola_mola
ENSCSEG00000013557	msi2a	80	67.633	ENSMODG00000014790	MSI2	100	69.082	Monodelphis_domestica
ENSCSEG00000013557	msi2a	79	92.308	ENSMALG00000000071	msi2a	81	75.773	Monopterus_albus
ENSCSEG00000013557	msi2a	83	73.711	MGP_CAROLIEiJ_G0016948	Msi2	78	75.258	Mus_caroli
ENSCSEG00000013557	msi2a	83	73.711	ENSMUSG00000069769	Msi2	78	75.258	Mus_musculus
ENSCSEG00000013557	msi2a	83	73.711	MGP_PahariEiJ_G0018079	Msi2	78	75.258	Mus_pahari
ENSCSEG00000013557	msi2a	83	73.711	MGP_SPRETEiJ_G0017795	Msi2	78	75.258	Mus_spretus
ENSCSEG00000013557	msi2a	83	73.711	ENSMPUG00000015377	MSI2	79	75.258	Mustela_putorius_furo
ENSCSEG00000013557	msi2a	83	73.711	ENSMLUG00000007865	MSI2	79	75.258	Myotis_lucifugus
ENSCSEG00000013557	msi2a	83	67.925	ENSNGAG00000017807	Msi2	79	69.340	Nannospalax_galili
ENSCSEG00000013557	msi2a	83	79.381	ENSNBRG00000014596	msi2a	81	80.412	Neolamprologus_brichardi
ENSCSEG00000013557	msi2a	83	74.227	ENSNLEG00000008059	MSI2	88	69.340	Nomascus_leucogenys
ENSCSEG00000013557	msi2a	83	67.925	ENSODEG00000011974	MSI2	79	69.340	Octodon_degus
ENSCSEG00000013557	msi2a	76	80.734	ENSOANG00000005667	MSI2	57	80.734	Ornithorhynchus_anatinus
ENSCSEG00000013557	msi2a	83	73.711	ENSOCUG00000010440	MSI2	79	75.258	Oryctolagus_cuniculus
ENSCSEG00000013557	msi2a	97	79.897	ENSORLG00000009671	msi2a	86	80.928	Oryzias_latipes
ENSCSEG00000013557	msi2a	97	79.897	ENSORLG00020021556	msi2a	86	80.928	Oryzias_latipes_hni
ENSCSEG00000013557	msi2a	97	79.897	ENSORLG00015004592	msi2a	86	80.928	Oryzias_latipes_hsok
ENSCSEG00000013557	msi2a	91	79.897	ENSOMEG00000000146	msi2a	90	80.928	Oryzias_melastigma
ENSCSEG00000013557	msi2a	83	72.254	ENSOGAG00000005621	MSI2	78	74.576	Otolemur_garnettii
ENSCSEG00000013557	msi2a	83	67.925	ENSPPAG00000037697	MSI2	84	69.340	Pan_paniscus
ENSCSEG00000013557	msi2a	83	73.711	ENSPPRG00000001848	MSI2	78	75.258	Panthera_pardus
ENSCSEG00000013557	msi2a	83	67.925	ENSPTIG00000021678	MSI2	84	69.340	Panthera_tigris_altaica
ENSCSEG00000013557	msi2a	83	74.227	ENSPTRG00000009437	MSI2	84	69.340	Pan_troglodytes
ENSCSEG00000013557	msi2a	83	73.711	ENSPANG00000022319	MSI2	78	75.258	Papio_anubis
ENSCSEG00000013557	msi2a	76	70.391	ENSPKIG00000007038	-	82	62.281	Paramormyrops_kingsleyae
ENSCSEG00000013557	msi2a	83	80.734	ENSPSIG00000008618	MSI2	65	78.261	Pelodiscus_sinensis
ENSCSEG00000013557	msi2a	83	79.381	ENSPMGG00000005888	msi2a	81	80.412	Periophthalmus_magnuspinnatus
ENSCSEG00000013557	msi2a	83	67.453	ENSPCIG00000006063	MSI2	77	68.868	Phascolarctos_cinereus
ENSCSEG00000013557	msi2a	79	92.308	ENSPREG00000000881	msi2a	81	77.320	Poecilia_reticulata
ENSCSEG00000013557	msi2a	83	69.588	ENSPPYG00000008244	-	81	71.134	Pongo_abelii
ENSCSEG00000013557	msi2a	82	61.140	ENSPCAG00000010552	MSI2	81	62.694	Procavia_capensis
ENSCSEG00000013557	msi2a	63	86.667	ENSPVAG00000017053	MSI2	87	62.887	Pteropus_vampyrus
ENSCSEG00000013557	msi2a	79	92.308	ENSPNYG00000018393	msi2a	81	80.412	Pundamilia_nyererei
ENSCSEG00000013557	msi2a	83	86.154	ENSPNAG00000014957	msi2a	82	76.410	Pygocentrus_nattereri
ENSCSEG00000013557	msi2a	83	74.872	ENSPNAG00000000844	msi2b	82	75.897	Pygocentrus_nattereri
ENSCSEG00000013557	msi2a	83	73.711	ENSRNOG00000025338	Msi2	90	75.258	Rattus_norvegicus
ENSCSEG00000013557	msi2a	83	74.227	ENSSBOG00000026425	MSI2	84	69.340	Saimiri_boliviensis_boliviensis
ENSCSEG00000013557	msi2a	83	67.453	ENSSHAG00000008672	MSI2	84	68.868	Sarcophilus_harrisii
ENSCSEG00000013557	msi2a	83	72.539	ENSSFOG00015021687	-	81	72.539	Scleropages_formosus
ENSCSEG00000013557	msi2a	83	81.081	ENSSFOG00015012168	msi2b	51	81.081	Scleropages_formosus
ENSCSEG00000013557	msi2a	79	92.308	ENSSMAG00000018484	msi2a	81	80.928	Scophthalmus_maximus
ENSCSEG00000013557	msi2a	83	68.137	ENSSDUG00000021968	-	79	68.932	Seriola_dumerili
ENSCSEG00000013557	msi2a	79	93.846	ENSSDUG00000014507	msi2a	81	81.443	Seriola_dumerili
ENSCSEG00000013557	msi2a	79	93.846	ENSSLDG00000017172	msi2a	81	81.443	Seriola_lalandi_dorsalis
ENSCSEG00000013557	msi2a	79	93.846	ENSSPAG00000017793	msi2a	76	82.011	Stegastes_partitus
ENSCSEG00000013557	msi2a	83	73.711	ENSSSCG00000038505	MSI2	78	75.258	Sus_scrofa
ENSCSEG00000013557	msi2a	80	68.116	ENSTGUG00000008452	MSI2	100	69.565	Taeniopygia_guttata
ENSCSEG00000013557	msi2a	83	77.835	ENSTRUG00000021248	msi2a	76	78.866	Takifugu_rubripes
ENSCSEG00000013557	msi2a	83	72.165	ENSTTRG00000002189	MSI2	82	72.165	Tursiops_truncatus
ENSCSEG00000013557	msi2a	83	74.603	ENSUAMG00000000700	MSI2	79	75.258	Ursus_americanus
ENSCSEG00000013557	msi2a	76	73.143	ENSUMAG00000000505	MSI2	84	72.727	Ursus_maritimus
ENSCSEG00000013557	msi2a	83	74.603	ENSVVUG00000011783	MSI2	79	69.340	Vulpes_vulpes
ENSCSEG00000013557	msi2a	83	92.063	ENSXCOG00000006113	msi2a	63	82.609	Xiphophorus_couchianus
ENSCSEG00000013557	msi2a	79	90.769	ENSXMAG00000000608	msi2a	80	79.006	Xiphophorus_maculatus