EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000013841 (Gene tree)
Gene ID: 103392980
Gene Symbol: tufm
Alias: fi06f04|wu:fi06f04|zgc:110766
Full Name: Tu translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 8157 bases
Position: chr17:7579556-7587712
Accession: 103392980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000021691	GTP_EFTU	PF00009.27	3.5e-54	1	1
ENSCSEP00000021696	GTP_EFTU	PF00009.27	3.8e-54	1	1
ENSCSEP00000021696	GTP_EFTU_D2	PF03144.25	5.5e-16	1	1
ENSCSEP00000021691	GTP_EFTU_D2	PF03144.25	1.3e-15	1	1
ENSCSEP00000021691	GTP_EFTU_D3	PF03143.17	1.6e-24	1	1
ENSCSEP00000021696	GTP_EFTU_D3	PF03143.17	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000021973	-	5838	XM_008329767	ENSCSEP00000021696	446 (aa)	XP_008327989	UPI000497DF6E
ENSCSET00000021969	-	1290	-	ENSCSEP00000021691	429 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000013841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000013841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000013841	tufm	83	30.750	ENSCSEG00000007992	-	94	30.750
ENSCSEG00000013841	tufm	83	31.266	ENSCSEG00000007972	-	95	31.266

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000013841	tufm	96	76.214	ENSG00000178952	TUFM	92	75.837	Homo_sapiens
ENSCSEG00000013841	tufm	100	88.341	ENSAPOG00000013385	tufm	100	88.341	Acanthochromis_polyacanthus
ENSCSEG00000013841	tufm	97	76.499	ENSAMEG00000015551	TUFM	92	76.499	Ailuropoda_melanoleuca
ENSCSEG00000013841	tufm	98	86.429	ENSACIG00000007388	tufm	97	86.429	Amphilophus_citrinellus
ENSCSEG00000013841	tufm	100	88.117	ENSAOCG00000001032	tufm	100	88.117	Amphiprion_ocellaris
ENSCSEG00000013841	tufm	100	88.117	ENSAPEG00000015751	tufm	100	88.117	Amphiprion_percula
ENSCSEG00000013841	tufm	100	86.099	ENSATEG00000002905	tufm	97	86.099	Anabas_testudineus
ENSCSEG00000013841	tufm	96	77.561	ENSACAG00000005399	TUFM	89	77.561	Anolis_carolinensis
ENSCSEG00000013841	tufm	97	75.540	ENSANAG00000022206	TUFM	92	75.540	Aotus_nancymaae
ENSCSEG00000013841	tufm	100	86.996	ENSACLG00000007403	tufm	93	86.996	Astatotilapia_calliptera
ENSCSEG00000013841	tufm	97	76.499	ENSBTAG00000019216	TUFM	92	76.499	Bos_taurus
ENSCSEG00000013841	tufm	93	57.353	WBGene00007000	tufm-1	82	57.353	Caenorhabditis_elegans
ENSCSEG00000013841	tufm	97	75.300	ENSCJAG00000006236	TUFM	92	75.300	Callithrix_jacchus
ENSCSEG00000013841	tufm	97	76.739	ENSCAFG00000017216	TUFM	92	76.739	Canis_familiaris
ENSCSEG00000013841	tufm	97	76.739	ENSCAFG00020017574	TUFM	92	76.739	Canis_lupus_dingo
ENSCSEG00000013841	tufm	97	76.739	ENSCHIG00000020583	TUFM	92	76.739	Capra_hircus
ENSCSEG00000013841	tufm	100	74.115	ENSTSYG00000026053	TUFM	93	76.303	Carlito_syrichta
ENSCSEG00000013841	tufm	97	76.499	ENSCPOG00000010534	TUFM	92	76.499	Cavia_porcellus
ENSCSEG00000013841	tufm	97	75.540	ENSCCAG00000033296	TUFM	92	75.540	Cebus_capucinus
ENSCSEG00000013841	tufm	97	75.779	ENSCATG00000035822	TUFM	92	75.779	Cercocebus_atys
ENSCSEG00000013841	tufm	97	76.739	ENSCLAG00000013969	TUFM	92	76.739	Chinchilla_lanigera
ENSCSEG00000013841	tufm	97	75.300	ENSCSAG00000006314	TUFM	92	75.300	Chlorocebus_sabaeus
ENSCSEG00000013841	tufm	97	76.555	ENSCHOG00000009077	TUFM	92	76.555	Choloepus_hoffmanni
ENSCSEG00000013841	tufm	97	77.831	ENSCPBG00000003874	TUFM	91	77.619	Chrysemys_picta_bellii
ENSCSEG00000013841	tufm	94	58.663	ENSCING00000002841	-	94	58.663	Ciona_intestinalis
ENSCSEG00000013841	tufm	98	56.770	ENSCSAVG00000009380	-	91	58.432	Ciona_savignyi
ENSCSEG00000013841	tufm	97	75.359	ENSCANG00000035829	TUFM	92	75.359	Colobus_angolensis_palliatus
ENSCSEG00000013841	tufm	97	75.779	ENSCGRG00001022949	Tufm	92	75.779	Cricetulus_griseus_chok1gshd
ENSCSEG00000013841	tufm	97	75.779	ENSCGRG00000001868	-	92	75.779	Cricetulus_griseus_crigri
ENSCSEG00000013841	tufm	97	53.222	ENSCGRG00000013193	-	92	53.222	Cricetulus_griseus_crigri
ENSCSEG00000013841	tufm	100	87.668	ENSCVAG00000006251	tufm	100	87.668	Cyprinodon_variegatus
ENSCSEG00000013841	tufm	100	82.511	ENSDARG00000104173	tufm	99	82.511	Danio_rerio
ENSCSEG00000013841	tufm	100	72.124	ENSDNOG00000047636	TUFM	99	72.124	Dasypus_novemcinctus
ENSCSEG00000013841	tufm	94	61.611	ENSDORG00000023544	-	99	62.228	Dipodomys_ordii
ENSCSEG00000013841	tufm	95	69.042	FBgn0024556	mEFTu1	83	69.042	Drosophila_melanogaster
ENSCSEG00000013841	tufm	84	63.611	ENSETEG00000009601	TUFM	90	63.611	Echinops_telfairi
ENSCSEG00000013841	tufm	95	72.059	ENSEBUG00000015907	tufm	67	72.304	Eptatretus_burgeri
ENSCSEG00000013841	tufm	99	75.234	ENSEASG00005015477	TUFM	99	74.222	Equus_asinus_asinus
ENSCSEG00000013841	tufm	99	75.234	ENSECAG00000019763	TUFM	99	74.222	Equus_caballus
ENSCSEG00000013841	tufm	86	75.269	ENSEEUG00000001402	TUFM	93	75.269	Erinaceus_europaeus
ENSCSEG00000013841	tufm	100	85.045	ENSELUG00000013410	tufm	96	85.045	Esox_lucius
ENSCSEG00000013841	tufm	97	76.739	ENSFCAG00000003103	TUFM	60	76.739	Felis_catus
ENSCSEG00000013841	tufm	92	72.589	ENSFDAG00000010881	TUFM	98	73.955	Fukomys_damarensis
ENSCSEG00000013841	tufm	98	79.384	ENSFHEG00000020646	tufm	94	79.384	Fundulus_heteroclitus
ENSCSEG00000013841	tufm	100	84.305	ENSGMOG00000014616	tufm	100	84.305	Gadus_morhua
ENSCSEG00000013841	tufm	100	86.547	ENSGAFG00000004682	tufm	100	86.547	Gambusia_affinis
ENSCSEG00000013841	tufm	100	85.874	ENSGACG00000012961	tufm	100	85.874	Gasterosteus_aculeatus
ENSCSEG00000013841	tufm	97	78.554	ENSGAGG00000006132	TUFM	99	78.908	Gopherus_agassizii
ENSCSEG00000013841	tufm	96	76.214	ENSGGOG00000014136	TUFM	99	73.009	Gorilla_gorilla
ENSCSEG00000013841	tufm	100	87.444	ENSHBUG00000019031	tufm	93	87.444	Haplochromis_burtoni
ENSCSEG00000013841	tufm	97	75.060	ENSHGLG00000006613	TUFM	93	74.408	Heterocephalus_glaber_female
ENSCSEG00000013841	tufm	97	71.223	ENSHGLG00100004096	TUFM	93	70.616	Heterocephalus_glaber_male
ENSCSEG00000013841	tufm	99	86.966	ENSHCOG00000014418	tufm	99	86.966	Hippocampus_comes
ENSCSEG00000013841	tufm	100	83.632	ENSIPUG00000022457	tufm	100	83.632	Ictalurus_punctatus
ENSCSEG00000013841	tufm	95	44.037	ENSIPUG00000020682	-	91	52.201	Ictalurus_punctatus
ENSCSEG00000013841	tufm	97	77.458	ENSSTOG00000011837	TUFM	99	73.392	Ictidomys_tridecemlineatus
ENSCSEG00000013841	tufm	97	76.683	ENSJJAG00000011840	Tufm	92	76.683	Jaculus_jaculus
ENSCSEG00000013841	tufm	100	85.202	ENSKMAG00000009794	tufm	100	85.202	Kryptolebias_marmoratus
ENSCSEG00000013841	tufm	100	85.426	ENSLBEG00000023735	tufm	100	85.426	Labrus_bergylta
ENSCSEG00000013841	tufm	98	80.569	ENSLACG00000008242	TUFM	93	80.569	Latimeria_chalumnae
ENSCSEG00000013841	tufm	97	73.206	ENSLAFG00000028911	TUFM	92	73.206	Loxodonta_africana
ENSCSEG00000013841	tufm	97	75.837	ENSMFAG00000033739	TUFM	92	75.837	Macaca_fascicularis
ENSCSEG00000013841	tufm	97	75.837	ENSMMUG00000003303	TUFM	92	75.837	Macaca_mulatta
ENSCSEG00000013841	tufm	97	75.837	ENSMNEG00000006031	TUFM	92	75.837	Macaca_nemestrina
ENSCSEG00000013841	tufm	97	75.779	ENSMLEG00000042133	TUFM	92	75.779	Mandrillus_leucophaeus
ENSCSEG00000013841	tufm	100	87.444	ENSMAMG00000002053	tufm	100	87.444	Mastacembelus_armatus
ENSCSEG00000013841	tufm	100	87.220	ENSMZEG00005010857	tufm	93	87.220	Maylandia_zebra
ENSCSEG00000013841	tufm	97	76.019	ENSMAUG00000010490	Tufm	92	76.019	Mesocricetus_auratus
ENSCSEG00000013841	tufm	97	76.019	ENSMICG00000007650	TUFM	92	76.019	Microcebus_murinus
ENSCSEG00000013841	tufm	97	76.259	ENSMOCG00000010051	Tufm	92	76.259	Microtus_ochrogaster
ENSCSEG00000013841	tufm	99	85.106	ENSMMOG00000012344	tufm	94	85.106	Mola_mola
ENSCSEG00000013841	tufm	97	77.053	ENSMODG00000015564	TUFM	91	77.240	Monodelphis_domestica
ENSCSEG00000013841	tufm	100	87.220	ENSMALG00000020254	tufm	100	87.220	Monopterus_albus
ENSCSEG00000013841	tufm	97	77.218	MGP_CAROLIEiJ_G0030449	-	92	77.218	Mus_caroli
ENSCSEG00000013841	tufm	97	77.218	MGP_CAROLIEiJ_G0030448	-	98	78.070	Mus_caroli
ENSCSEG00000013841	tufm	97	77.218	ENSMUSG00000073838	Tufm	98	78.070	Mus_musculus
ENSCSEG00000013841	tufm	97	76.978	MGP_PahariEiJ_G0013658	-	98	78.070	Mus_pahari
ENSCSEG00000013841	tufm	97	76.978	MGP_PahariEiJ_G0013659	-	92	76.978	Mus_pahari
ENSCSEG00000013841	tufm	97	77.458	MGP_SPRETEiJ_G0031562	-	98	78.947	Mus_spretus
ENSCSEG00000013841	tufm	97	71.145	MGP_SPRETEiJ_G0031563	-	93	71.145	Mus_spretus
ENSCSEG00000013841	tufm	85	76.923	ENSMPUG00000012816	TUFM	98	76.757	Mustela_putorius_furo
ENSCSEG00000013841	tufm	97	76.259	ENSMLUG00000012335	-	92	76.259	Myotis_lucifugus
ENSCSEG00000013841	tufm	97	76.499	ENSNGAG00000008610	Tufm	92	76.499	Nannospalax_galili
ENSCSEG00000013841	tufm	85	86.027	ENSNBRG00000006466	tufm	96	86.464	Neolamprologus_brichardi
ENSCSEG00000013841	tufm	100	68.433	ENSNLEG00000011063	TUFM	92	71.122	Nomascus_leucogenys
ENSCSEG00000013841	tufm	81	76.369	ENSMEUG00000011131	TUFM	100	76.369	Notamacropus_eugenii
ENSCSEG00000013841	tufm	97	65.468	ENSOPRG00000002318	-	91	65.468	Ochotona_princeps
ENSCSEG00000013841	tufm	100	87.892	ENSONIG00000019389	tufm	100	87.892	Oreochromis_niloticus
ENSCSEG00000013841	tufm	97	78.072	ENSOANG00000013114	TUFM	95	78.072	Ornithorhynchus_anatinus
ENSCSEG00000013841	tufm	97	76.978	ENSOCUG00000002683	TUFM	91	76.978	Oryctolagus_cuniculus
ENSCSEG00000013841	tufm	100	86.996	ENSORLG00000011497	tufm	100	86.996	Oryzias_latipes
ENSCSEG00000013841	tufm	100	87.220	ENSORLG00020013437	tufm	100	87.220	Oryzias_latipes_hni
ENSCSEG00000013841	tufm	100	86.996	ENSORLG00015003107	tufm	100	86.996	Oryzias_latipes_hsok
ENSCSEG00000013841	tufm	100	87.444	ENSOMEG00000016958	tufm	100	87.444	Oryzias_melastigma
ENSCSEG00000013841	tufm	97	76.739	ENSOGAG00000006875	TUFM	93	76.010	Otolemur_garnettii
ENSCSEG00000013841	tufm	93	77.612	ENSOARG00000002357	TUFM	97	77.612	Ovis_aries
ENSCSEG00000013841	tufm	96	76.214	ENSPPAG00000035168	TUFM	92	75.837	Pan_paniscus
ENSCSEG00000013841	tufm	97	76.739	ENSPPRG00000014248	TUFM	92	76.739	Panthera_pardus
ENSCSEG00000013841	tufm	97	76.499	ENSPTIG00000009980	TUFM	98	76.499	Panthera_tigris_altaica
ENSCSEG00000013841	tufm	96	76.214	ENSPTRG00000007939	TUFM	92	75.837	Pan_troglodytes
ENSCSEG00000013841	tufm	97	75.598	ENSPANG00000019624	TUFM	92	75.598	Papio_anubis
ENSCSEG00000013841	tufm	100	81.696	ENSPKIG00000023809	tufm	98	80.580	Paramormyrops_kingsleyae
ENSCSEG00000013841	tufm	73	76.825	ENSPSIG00000005302	TUFM	100	76.825	Pelodiscus_sinensis
ENSCSEG00000013841	tufm	98	86.667	ENSPMGG00000015631	tufm	99	86.842	Periophthalmus_magnuspinnatus
ENSCSEG00000013841	tufm	97	76.259	ENSPEMG00000012208	Tufm	92	76.259	Peromyscus_maniculatus_bairdii
ENSCSEG00000013841	tufm	97	76.019	ENSPCIG00000025208	TUFM	91	76.019	Phascolarctos_cinereus
ENSCSEG00000013841	tufm	100	84.305	ENSPFOG00000007043	tufm	100	84.305	Poecilia_formosa
ENSCSEG00000013841	tufm	98	83.810	ENSPLAG00000014372	tufm	94	83.971	Poecilia_latipinna
ENSCSEG00000013841	tufm	100	84.529	ENSPMEG00000019508	tufm	100	84.529	Poecilia_mexicana
ENSCSEG00000013841	tufm	100	82.366	ENSPMEG00000014520	-	100	82.993	Poecilia_mexicana
ENSCSEG00000013841	tufm	100	84.978	ENSPREG00000013913	tufm	100	84.978	Poecilia_reticulata
ENSCSEG00000013841	tufm	97	75.060	ENSPPYG00000007226	TUFM	92	75.060	Pongo_abelii
ENSCSEG00000013841	tufm	97	71.053	ENSPCAG00000015294	TUFM	93	70.379	Procavia_capensis
ENSCSEG00000013841	tufm	97	76.259	ENSPCOG00000012267	TUFM	92	76.259	Propithecus_coquereli
ENSCSEG00000013841	tufm	99	86.907	ENSPNYG00000008905	tufm	99	87.104	Pundamilia_nyererei
ENSCSEG00000013841	tufm	100	84.305	ENSPNAG00000018881	tufm	100	84.305	Pygocentrus_nattereri
ENSCSEG00000013841	tufm	97	76.978	ENSRNOG00000018604	Tufm	92	76.978	Rattus_norvegicus
ENSCSEG00000013841	tufm	100	69.623	ENSRBIG00000042008	-	92	72.488	Rhinopithecus_bieti
ENSCSEG00000013841	tufm	60	74.806	ENSRBIG00000036713	-	94	74.806	Rhinopithecus_bieti
ENSCSEG00000013841	tufm	97	75.837	ENSRROG00000036858	-	92	75.837	Rhinopithecus_roxellana
ENSCSEG00000013841	tufm	63	75.093	ENSRROG00000044977	-	73	75.093	Rhinopithecus_roxellana
ENSCSEG00000013841	tufm	97	59.005	YOR187W	TUF1	97	59.005	Saccharomyces_cerevisiae
ENSCSEG00000013841	tufm	97	74.820	ENSSBOG00000026542	TUFM	93	74.820	Saimiri_boliviensis_boliviensis
ENSCSEG00000013841	tufm	97	77.088	ENSSHAG00000012121	TUFM	97	77.273	Sarcophilus_harrisii
ENSCSEG00000013841	tufm	100	80.804	ENSSFOG00015013352	tufm	100	79.688	Scleropages_formosus
ENSCSEG00000013841	tufm	100	87.892	ENSSMAG00000010053	tufm	100	87.892	Scophthalmus_maximus
ENSCSEG00000013841	tufm	100	87.892	ENSSDUG00000016896	tufm	100	87.892	Seriola_dumerili
ENSCSEG00000013841	tufm	100	88.117	ENSSLDG00000006494	tufm	100	88.117	Seriola_lalandi_dorsalis
ENSCSEG00000013841	tufm	84	76.454	ENSSARG00000011228	TUFM	96	76.099	Sorex_araneus
ENSCSEG00000013841	tufm	97	70.574	ENSSPUG00000016312	TUFM	96	70.574	Sphenodon_punctatus
ENSCSEG00000013841	tufm	100	87.444	ENSSPAG00000009936	tufm	99	87.444	Stegastes_partitus
ENSCSEG00000013841	tufm	97	76.499	ENSSSCG00000007803	TUFM	92	76.499	Sus_scrofa
ENSCSEG00000013841	tufm	100	86.771	ENSTRUG00000008300	tufm	100	86.771	Takifugu_rubripes
ENSCSEG00000013841	tufm	97	73.861	ENSTBEG00000015029	TUFM	91	74.580	Tupaia_belangeri
ENSCSEG00000013841	tufm	60	75.486	ENSTTRG00000005930	-	57	75.486	Tursiops_truncatus
ENSCSEG00000013841	tufm	64	76.000	ENSTTRG00000001980	-	100	76.000	Tursiops_truncatus
ENSCSEG00000013841	tufm	97	76.019	ENSUAMG00000001471	TUFM	92	76.019	Ursus_americanus
ENSCSEG00000013841	tufm	94	77.586	ENSUMAG00000009341	TUFM	99	77.586	Ursus_maritimus
ENSCSEG00000013841	tufm	64	74.909	ENSVPAG00000009541	TUFM	100	74.909	Vicugna_pacos
ENSCSEG00000013841	tufm	97	76.499	ENSVVUG00000024170	TUFM	92	76.499	Vulpes_vulpes
ENSCSEG00000013841	tufm	50	89.362	ENSXETG00000028019	-	78	89.362	Xenopus_tropicalis
ENSCSEG00000013841	tufm	98	86.667	ENSXMAG00000011848	tufm	97	86.667	Xiphophorus_maculatus