EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000013905 (Gene tree)
Gene ID: 103389766
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 17885 bases
Position: chr14:15841486-15859370
Accession: 103389766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000021786	RNA_ligase	PF09414.10	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000022064	-	3149	XM_017039092	ENSCSEP00000021786	922 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000013905's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000013905's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000013905	lig4	95	66.931	ENSG00000174405	LIG4	97	67.718	Homo_sapiens
ENSCSEG00000013905	lig4	96	85.569	ENSAPOG00000000866	lig4	97	85.569	Acanthochromis_polyacanthus
ENSCSEG00000013905	lig4	95	64.966	ENSAMEG00000019685	LIG4	96	64.966	Ailuropoda_melanoleuca
ENSCSEG00000013905	lig4	96	86.133	ENSACIG00000018309	lig4	97	86.133	Amphilophus_citrinellus
ENSCSEG00000013905	lig4	96	86.020	ENSAOCG00000011768	lig4	97	86.020	Amphiprion_ocellaris
ENSCSEG00000013905	lig4	96	86.246	ENSAPEG00000017815	lig4	97	86.246	Amphiprion_percula
ENSCSEG00000013905	lig4	96	85.569	ENSATEG00000005583	lig4	97	85.569	Anabas_testudineus
ENSCSEG00000013905	lig4	92	67.995	ENSAPLG00000001673	LIG4	97	67.995	Anas_platyrhynchos
ENSCSEG00000013905	lig4	95	67.429	ENSACAG00000014566	LIG4	97	67.429	Anolis_carolinensis
ENSCSEG00000013905	lig4	95	65.909	ENSANAG00000012446	LIG4	97	65.909	Aotus_nancymaae
ENSCSEG00000013905	lig4	96	84.893	ENSACLG00000027051	lig4	97	84.893	Astatotilapia_calliptera
ENSCSEG00000013905	lig4	96	77.964	ENSAMXG00000008192	lig4	93	77.964	Astyanax_mexicanus
ENSCSEG00000013905	lig4	95	66.136	ENSBTAG00000015868	LIG4	97	66.136	Bos_taurus
ENSCSEG00000013905	lig4	95	65.455	ENSCJAG00000014689	LIG4	97	65.455	Callithrix_jacchus
ENSCSEG00000013905	lig4	95	65.682	ENSCAFG00000006031	LIG4	97	65.682	Canis_familiaris
ENSCSEG00000013905	lig4	95	65.682	ENSCAFG00020021230	LIG4	97	65.682	Canis_lupus_dingo
ENSCSEG00000013905	lig4	95	66.250	ENSCHIG00000001019	LIG4	97	66.250	Capra_hircus
ENSCSEG00000013905	lig4	95	65.271	ENSCAPG00000006284	LIG4	98	65.271	Cavia_aperea
ENSCSEG00000013905	lig4	95	65.158	ENSCPOG00000014266	LIG4	97	65.158	Cavia_porcellus
ENSCSEG00000013905	lig4	95	66.250	ENSCCAG00000019971	LIG4	97	66.250	Cebus_capucinus
ENSCSEG00000013905	lig4	95	66.931	ENSCATG00000021075	LIG4	97	66.931	Cercocebus_atys
ENSCSEG00000013905	lig4	95	65.459	ENSCLAG00000003376	LIG4	97	65.459	Chinchilla_lanigera
ENSCSEG00000013905	lig4	95	66.931	ENSCSAG00000000211	LIG4	97	66.931	Chlorocebus_sabaeus
ENSCSEG00000013905	lig4	95	69.118	ENSCPBG00000023291	LIG4	97	68.450	Chrysemys_picta_bellii
ENSCSEG00000013905	lig4	70	46.341	ENSCING00000009536	-	99	46.341	Ciona_intestinalis
ENSCSEG00000013905	lig4	82	44.737	ENSCSAVG00000010336	-	98	44.737	Ciona_savignyi
ENSCSEG00000013905	lig4	95	66.704	ENSCANG00000005805	LIG4	97	66.704	Colobus_angolensis_palliatus
ENSCSEG00000013905	lig4	96	64.752	ENSCGRG00001012072	Lig4	97	64.752	Cricetulus_griseus_chok1gshd
ENSCSEG00000013905	lig4	96	64.752	ENSCGRG00000013417	Lig4	97	64.752	Cricetulus_griseus_crigri
ENSCSEG00000013905	lig4	96	85.023	ENSCVAG00000007896	lig4	97	85.023	Cyprinodon_variegatus
ENSCSEG00000013905	lig4	96	77.452	ENSDARG00000060620	lig4	97	77.452	Danio_rerio
ENSCSEG00000013905	lig4	95	65.646	ENSDNOG00000000513	LIG4	97	65.646	Dasypus_novemcinctus
ENSCSEG00000013905	lig4	95	66.818	ENSDORG00000027303	Lig4	97	66.818	Dipodomys_ordii
ENSCSEG00000013905	lig4	88	30.832	FBgn0030506	Lig4	91	30.832	Drosophila_melanogaster
ENSCSEG00000013905	lig4	95	63.367	ENSETEG00000015563	LIG4	97	63.595	Echinops_telfairi
ENSCSEG00000013905	lig4	96	44.111	ENSEBUG00000014243	lig4	97	44.111	Eptatretus_burgeri
ENSCSEG00000013905	lig4	95	65.909	ENSEASG00005022073	LIG4	97	65.909	Equus_asinus_asinus
ENSCSEG00000013905	lig4	95	66.023	ENSECAG00000003257	LIG4	97	66.023	Equus_caballus
ENSCSEG00000013905	lig4	95	81.393	ENSELUG00000006787	lig4	96	81.393	Esox_lucius
ENSCSEG00000013905	lig4	96	64.149	ENSFCAG00000031985	LIG4	97	64.149	Felis_catus
ENSCSEG00000013905	lig4	86	69.057	ENSFALG00000004214	LIG4	97	69.057	Ficedula_albicollis
ENSCSEG00000013905	lig4	95	65.341	ENSFDAG00000008973	LIG4	97	65.341	Fukomys_damarensis
ENSCSEG00000013905	lig4	96	85.473	ENSFHEG00000007398	lig4	88	85.473	Fundulus_heteroclitus
ENSCSEG00000013905	lig4	84	77.378	ENSGMOG00000012843	lig4	99	77.378	Gadus_morhua
ENSCSEG00000013905	lig4	95	66.781	ENSGALG00000016854	LIG4	96	66.781	Gallus_gallus
ENSCSEG00000013905	lig4	96	84.400	ENSGAFG00000019779	lig4	94	84.512	Gambusia_affinis
ENSCSEG00000013905	lig4	95	82.857	ENSGACG00000014135	lig4	96	82.857	Gasterosteus_aculeatus
ENSCSEG00000013905	lig4	95	66.931	ENSGGOG00000027771	LIG4	97	66.931	Gorilla_gorilla
ENSCSEG00000013905	lig4	96	84.667	ENSHBUG00000006245	lig4	97	84.667	Haplochromis_burtoni
ENSCSEG00000013905	lig4	95	65.227	ENSHGLG00000000718	LIG4	97	65.227	Heterocephalus_glaber_female
ENSCSEG00000013905	lig4	95	65.227	ENSHGLG00100003265	LIG4	97	65.227	Heterocephalus_glaber_male
ENSCSEG00000013905	lig4	96	79.415	ENSHCOG00000012010	lig4	97	79.415	Hippocampus_comes
ENSCSEG00000013905	lig4	96	76.550	ENSIPUG00000013748	lig4	97	76.550	Ictalurus_punctatus
ENSCSEG00000013905	lig4	96	65.163	ENSSTOG00000024303	LIG4	97	65.163	Ictidomys_tridecemlineatus
ENSCSEG00000013905	lig4	95	65.909	ENSJJAG00000006750	Lig4	97	65.909	Jaculus_jaculus
ENSCSEG00000013905	lig4	97	82.103	ENSKMAG00000001149	lig4	97	82.300	Kryptolebias_marmoratus
ENSCSEG00000013905	lig4	87	85.323	ENSLBEG00000014578	lig4	97	85.323	Labrus_bergylta
ENSCSEG00000013905	lig4	95	69.977	ENSLACG00000003282	LIG4	96	69.977	Latimeria_chalumnae
ENSCSEG00000013905	lig4	96	73.094	ENSLOCG00000008901	lig4	96	73.094	Lepisosteus_oculatus
ENSCSEG00000013905	lig4	95	64.342	ENSLAFG00000031152	LIG4	97	64.342	Loxodonta_africana
ENSCSEG00000013905	lig4	95	66.818	ENSMFAG00000037235	LIG4	97	66.818	Macaca_fascicularis
ENSCSEG00000013905	lig4	95	66.705	ENSMMUG00000008874	LIG4	97	66.705	Macaca_mulatta
ENSCSEG00000013905	lig4	95	66.818	ENSMNEG00000023575	LIG4	97	66.818	Macaca_nemestrina
ENSCSEG00000013905	lig4	95	66.818	ENSMLEG00000026720	LIG4	97	66.818	Mandrillus_leucophaeus
ENSCSEG00000013905	lig4	97	85.393	ENSMAMG00000008472	lig4	97	85.393	Mastacembelus_armatus
ENSCSEG00000013905	lig4	96	85.006	ENSMZEG00005001855	lig4	97	85.006	Maylandia_zebra
ENSCSEG00000013905	lig4	96	66.254	ENSMGAG00000015532	LIG4	97	66.254	Meleagris_gallopavo
ENSCSEG00000013905	lig4	95	64.439	ENSMOCG00000019000	Lig4	97	64.439	Microtus_ochrogaster
ENSCSEG00000013905	lig4	96	83.878	ENSMMOG00000004390	lig4	97	83.878	Mola_mola
ENSCSEG00000013905	lig4	96	65.878	ENSMODG00000025064	LIG4	97	65.878	Monodelphis_domestica
ENSCSEG00000013905	lig4	96	85.118	ENSMALG00000008555	lig4	97	85.118	Monopterus_albus
ENSCSEG00000013905	lig4	95	65.114	MGP_CAROLIEiJ_G0030809	Lig4	97	65.114	Mus_caroli
ENSCSEG00000013905	lig4	95	65.114	ENSMUSG00000049717	Lig4	97	65.114	Mus_musculus
ENSCSEG00000013905	lig4	95	64.773	MGP_PahariEiJ_G0021270	Lig4	97	64.773	Mus_pahari
ENSCSEG00000013905	lig4	95	65.227	MGP_SPRETEiJ_G0031917	Lig4	97	65.227	Mus_spretus
ENSCSEG00000013905	lig4	95	65.498	ENSMPUG00000018675	LIG4	97	65.498	Mustela_putorius_furo
ENSCSEG00000013905	lig4	95	65.682	ENSMLUG00000001267	LIG4	97	65.682	Myotis_lucifugus
ENSCSEG00000013905	lig4	95	65.795	ENSNGAG00000013258	Lig4	97	65.795	Nannospalax_galili
ENSCSEG00000013905	lig4	96	84.667	ENSNBRG00000021252	lig4	97	84.667	Neolamprologus_brichardi
ENSCSEG00000013905	lig4	95	66.136	ENSNLEG00000007888	LIG4	97	66.136	Nomascus_leucogenys
ENSCSEG00000013905	lig4	95	64.666	ENSOPRG00000005765	LIG4	97	64.666	Ochotona_princeps
ENSCSEG00000013905	lig4	95	65.455	ENSODEG00000019683	LIG4	97	65.455	Octodon_degus
ENSCSEG00000013905	lig4	97	84.607	ENSONIG00000011969	lig4	97	84.607	Oreochromis_niloticus
ENSCSEG00000013905	lig4	95	65.341	ENSOCUG00000015734	LIG4	97	65.341	Oryctolagus_cuniculus
ENSCSEG00000013905	lig4	96	82.115	ENSORLG00000004041	lig4	97	82.227	Oryzias_latipes
ENSCSEG00000013905	lig4	96	82.115	ENSORLG00020019607	lig4	97	82.227	Oryzias_latipes_hni
ENSCSEG00000013905	lig4	96	82.227	ENSORLG00015017754	lig4	97	82.340	Oryzias_latipes_hsok
ENSCSEG00000013905	lig4	74	86.900	ENSOMEG00000003459	lig4	99	86.900	Oryzias_melastigma
ENSCSEG00000013905	lig4	95	66.212	ENSOGAG00000032120	LIG4	96	66.212	Otolemur_garnettii
ENSCSEG00000013905	lig4	80	70.421	ENSOARG00000005590	LIG4	97	70.421	Ovis_aries
ENSCSEG00000013905	lig4	95	66.704	ENSPPAG00000032998	LIG4	97	66.704	Pan_paniscus
ENSCSEG00000013905	lig4	96	64.713	ENSPPRG00000017804	LIG4	97	64.713	Panthera_pardus
ENSCSEG00000013905	lig4	96	64.600	ENSPTIG00000010051	LIG4	97	64.600	Panthera_tigris_altaica
ENSCSEG00000013905	lig4	95	66.818	ENSPTRG00000006025	LIG4	97	66.818	Pan_troglodytes
ENSCSEG00000013905	lig4	95	67.044	ENSPANG00000007562	LIG4	97	67.044	Papio_anubis
ENSCSEG00000013905	lig4	96	76.325	ENSPKIG00000011645	lig4	96	76.325	Paramormyrops_kingsleyae
ENSCSEG00000013905	lig4	95	69.292	ENSPSIG00000001504	LIG4	96	69.292	Pelodiscus_sinensis
ENSCSEG00000013905	lig4	94	78.760	ENSPMGG00000013486	lig4	97	77.915	Periophthalmus_magnuspinnatus
ENSCSEG00000013905	lig4	96	64.189	ENSPEMG00000000076	Lig4	97	64.189	Peromyscus_maniculatus_bairdii
ENSCSEG00000013905	lig4	96	65.315	ENSPCIG00000021882	LIG4	97	65.315	Phascolarctos_cinereus
ENSCSEG00000013905	lig4	96	85.264	ENSPFOG00000000797	lig4	97	85.264	Poecilia_formosa
ENSCSEG00000013905	lig4	96	85.152	ENSPLAG00000001196	lig4	97	85.152	Poecilia_latipinna
ENSCSEG00000013905	lig4	96	85.152	ENSPMEG00000021353	lig4	97	85.152	Poecilia_mexicana
ENSCSEG00000013905	lig4	94	85.121	ENSPREG00000007323	lig4	97	84.589	Poecilia_reticulata
ENSCSEG00000013905	lig4	95	66.591	ENSPPYG00000005540	LIG4	97	66.591	Pongo_abelii
ENSCSEG00000013905	lig4	95	65.000	ENSPVAG00000016403	LIG4	97	65.000	Pteropus_vampyrus
ENSCSEG00000013905	lig4	96	84.893	ENSPNYG00000009660	lig4	97	84.893	Pundamilia_nyererei
ENSCSEG00000013905	lig4	95	80.160	ENSPNAG00000028069	LIG4	97	80.160	Pygocentrus_nattereri
ENSCSEG00000013905	lig4	95	80.160	ENSPNAG00000028056	lig4	97	80.160	Pygocentrus_nattereri
ENSCSEG00000013905	lig4	95	65.000	ENSRNOG00000014605	Lig4	97	65.000	Rattus_norvegicus
ENSCSEG00000013905	lig4	95	66.025	ENSRBIG00000039962	LIG4	97	66.025	Rhinopithecus_bieti
ENSCSEG00000013905	lig4	95	66.704	ENSRROG00000006040	LIG4	97	66.704	Rhinopithecus_roxellana
ENSCSEG00000013905	lig4	95	66.023	ENSSBOG00000019029	LIG4	97	66.023	Saimiri_boliviensis_boliviensis
ENSCSEG00000013905	lig4	96	63.288	ENSSHAG00000009525	LIG4	97	63.288	Sarcophilus_harrisii
ENSCSEG00000013905	lig4	96	77.390	ENSSFOG00015012835	lig4	97	77.390	Scleropages_formosus
ENSCSEG00000013905	lig4	96	81.511	ENSSMAG00000011267	lig4	97	81.511	Scophthalmus_maximus
ENSCSEG00000013905	lig4	96	85.971	ENSSDUG00000010343	lig4	97	86.420	Seriola_dumerili
ENSCSEG00000013905	lig4	96	85.185	ENSSLDG00000003239	lig4	97	85.185	Seriola_lalandi_dorsalis
ENSCSEG00000013905	lig4	96	64.831	ENSSARG00000006573	LIG4	97	64.831	Sorex_araneus
ENSCSEG00000013905	lig4	88	69.523	ENSSPUG00000002444	LIG4	97	69.523	Sphenodon_punctatus
ENSCSEG00000013905	lig4	96	84.893	ENSSPAG00000001609	lig4	97	84.893	Stegastes_partitus
ENSCSEG00000013905	lig4	95	65.415	ENSSSCG00000009540	LIG4	97	65.415	Sus_scrofa
ENSCSEG00000013905	lig4	95	67.580	ENSTGUG00000010795	LIG4	97	67.580	Taeniopygia_guttata
ENSCSEG00000013905	lig4	96	83.540	ENSTRUG00000009984	lig4	97	83.540	Takifugu_rubripes
ENSCSEG00000013905	lig4	96	80.609	ENSTNIG00000010348	lig4	97	80.834	Tetraodon_nigroviridis
ENSCSEG00000013905	lig4	95	65.795	ENSTBEG00000017741	LIG4	97	65.795	Tupaia_belangeri
ENSCSEG00000013905	lig4	95	65.568	ENSTTRG00000012660	LIG4	97	65.568	Tursiops_truncatus
ENSCSEG00000013905	lig4	95	64.853	ENSUAMG00000003773	LIG4	97	64.853	Ursus_americanus
ENSCSEG00000013905	lig4	97	66.741	ENSXETG00000002654	lig4	98	66.741	Xenopus_tropicalis
ENSCSEG00000013905	lig4	96	85.039	ENSXCOG00000017401	lig4	97	85.039	Xiphophorus_couchianus
ENSCSEG00000013905	lig4	96	84.927	ENSXMAG00000015142	lig4	97	84.927	Xiphophorus_maculatus