EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000014051 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3479 bases
Position: chr20:9395638-9399116
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000022068	RRM_1	PF00076.22	5.6e-30	1	2
ENSCSEP00000022068	RRM_1	PF00076.22	5.6e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000022349	-	735	-	ENSCSEP00000022068	244 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000014051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014051's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000014051	-	70	33.613	ENSCSEG00000013549	msi2a	66	33.613
ENSCSEG00000014051	-	93	30.263	ENSCSEG00000000130	pabpc4	53	30.263
ENSCSEG00000014051	-	93	31.356	ENSCSEG00000005834	-	67	31.356
ENSCSEG00000014051	-	73	54.237	ENSCSEG00000007589	hnrnpa1a	67	54.237
ENSCSEG00000014051	-	76	81.081	ENSCSEG00000003421	hnrnpa0b	59	79.787
ENSCSEG00000014051	-	86	30.476	ENSCSEG00000011032	MSI1	66	30.476
ENSCSEG00000014051	-	73	53.371	ENSCSEG00000005613	HNRNPA3	56	53.977
ENSCSEG00000014051	-	74	35.260	ENSCSEG00000010345	-	55	35.260
ENSCSEG00000014051	-	72	35.429	ENSCSEG00000010909	hnrnpd	57	34.946
ENSCSEG00000014051	-	74	37.427	ENSCSEG00000011636	hnrnpaba	61	37.427
ENSCSEG00000014051	-	70	34.188	ENSCSEG00000003266	-	60	32.215
ENSCSEG00000014051	-	87	32.075	ENSCSEG00000008352	-	67	31.780

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014051	-	73	53.107	ENSAPOG00000019369	-	53	54.651	Acanthochromis_polyacanthus
ENSCSEG00000014051	-	72	68.182	ENSACIG00000021815	-	86	68.182	Amphilophus_citrinellus
ENSCSEG00000014051	-	73	53.107	ENSAOCG00000005289	-	53	54.651	Amphiprion_ocellaris
ENSCSEG00000014051	-	73	53.107	ENSAPEG00000004179	-	53	54.651	Amphiprion_percula
ENSCSEG00000014051	-	74	87.500	ENSATEG00000003423	-	76	87.500	Anabas_testudineus
ENSCSEG00000014051	-	73	53.107	ENSATEG00000022918	hnrnpa1a	85	54.023	Anabas_testudineus
ENSCSEG00000014051	-	70	69.006	ENSACAG00000017109	-	54	69.006	Anolis_carolinensis
ENSCSEG00000014051	-	73	54.237	ENSACLG00000006940	-	53	55.814	Astatotilapia_calliptera
ENSCSEG00000014051	-	71	72.989	ENSAMXG00000037730	-	54	71.271	Astyanax_mexicanus
ENSCSEG00000014051	-	73	53.672	ENSCVAG00000012637	hnrnpa1a	54	54.190	Cyprinodon_variegatus
ENSCSEG00000014051	-	74	68.023	ENSDORG00000026425	-	56	61.856	Dipodomys_ordii
ENSCSEG00000014051	-	71	53.448	ENSELUG00000007372	-	51	53.371	Esox_lucius
ENSCSEG00000014051	-	73	70.950	ENSGMOG00000020353	-	93	70.950	Gadus_morhua
ENSCSEG00000014051	-	73	53.672	ENSGAFG00000007751	-	54	54.190	Gambusia_affinis
ENSCSEG00000014051	-	72	65.909	ENSGAFG00000016803	-	53	65.909	Gambusia_affinis
ENSCSEG00000014051	-	74	52.486	ENSGACG00000009435	-	52	50.777	Gasterosteus_aculeatus
ENSCSEG00000014051	-	73	54.237	ENSHBUG00000005647	hnrnpa1a	54	55.814	Haplochromis_burtoni
ENSCSEG00000014051	-	77	52.571	ENSIPUG00000002023	hnrnpa1a	76	53.179	Ictalurus_punctatus
ENSCSEG00000014051	-	72	76.705	ENSIPUG00000001991	-	78	75.410	Ictalurus_punctatus
ENSCSEG00000014051	-	71	55.747	ENSIPUG00000022440	-	70	55.280	Ictalurus_punctatus
ENSCSEG00000014051	-	73	49.020	ENSJJAG00000009178	-	51	43.784	Jaculus_jaculus
ENSCSEG00000014051	-	74	53.846	ENSKMAG00000020859	-	54	54.749	Kryptolebias_marmoratus
ENSCSEG00000014051	-	74	53.591	ENSLBEG00000010010	hnrnpa1a	53	53.889	Labrus_bergylta
ENSCSEG00000014051	-	74	46.591	ENSMFAG00000028351	-	52	46.927	Macaca_fascicularis
ENSCSEG00000014051	-	73	53.672	ENSMAMG00000007606	-	53	55.233	Mastacembelus_armatus
ENSCSEG00000014051	-	73	54.237	ENSMZEG00005027173	hnrnpa1a	54	55.814	Maylandia_zebra
ENSCSEG00000014051	-	76	51.892	ENSMMOG00000008251	hnrnpa1a	77	52.747	Mola_mola
ENSCSEG00000014051	-	72	68.750	ENSMALG00000008886	-	88	67.033	Monopterus_albus
ENSCSEG00000014051	-	73	53.107	ENSMALG00000014091	hnrnpa1a	51	54.651	Monopterus_albus
ENSCSEG00000014051	-	73	54.237	ENSNBRG00000018441	-	54	55.814	Neolamprologus_brichardi
ENSCSEG00000014051	-	72	84.091	ENSNBRG00000014469	-	82	84.091	Neolamprologus_brichardi
ENSCSEG00000014051	-	87	60.185	ENSORLG00000029240	-	100	60.185	Oryzias_latipes
ENSCSEG00000014051	-	74	54.144	ENSORLG00000008001	-	56	54.749	Oryzias_latipes
ENSCSEG00000014051	-	70	67.066	ENSORLG00020006043	-	61	66.272	Oryzias_latipes_hni
ENSCSEG00000014051	-	87	56.204	ENSORLG00020022498	-	92	56.204	Oryzias_latipes_hni
ENSCSEG00000014051	-	74	54.144	ENSORLG00020006582	hnrnpa1a	81	55.491	Oryzias_latipes_hni
ENSCSEG00000014051	-	73	54.237	ENSORLG00015022294	-	54	55.814	Oryzias_latipes_hsok
ENSCSEG00000014051	-	72	54.857	ENSOMEG00000015959	-	70	55.814	Oryzias_melastigma
ENSCSEG00000014051	-	73	55.769	ENSPMGG00000011804	hnrnpa1a	67	55.769	Periophthalmus_magnuspinnatus
ENSCSEG00000014051	-	71	81.609	ENSPMGG00000016392	-	94	81.609	Periophthalmus_magnuspinnatus
ENSCSEG00000014051	-	73	53.672	ENSPFOG00000001825	-	54	54.190	Poecilia_formosa
ENSCSEG00000014051	-	73	53.672	ENSPMEG00000002425	-	54	54.190	Poecilia_mexicana
ENSCSEG00000014051	-	72	84.091	ENSPNYG00000020729	-	90	84.091	Pundamilia_nyererei
ENSCSEG00000014051	-	77	54.286	ENSPNAG00000007752	hnrnpa1a	73	54.286	Pygocentrus_nattereri
ENSCSEG00000014051	-	75	52.174	ENSPNAG00000021630	-	57	52.174	Pygocentrus_nattereri
ENSCSEG00000014051	-	74	86.391	ENSSMAG00000010279	-	95	86.391	Scophthalmus_maximus
ENSCSEG00000014051	-	73	52.542	ENSSMAG00000004641	hnrnpa1a	59	53.073	Scophthalmus_maximus
ENSCSEG00000014051	-	72	68.182	ENSSMAG00000010246	-	81	65.761	Scophthalmus_maximus
ENSCSEG00000014051	-	73	53.672	ENSSDUG00000013908	hnrnpa1a	82	54.545	Seriola_dumerili
ENSCSEG00000014051	-	81	75.622	ENSSDUG00000002431	-	96	75.622	Seriola_dumerili
ENSCSEG00000014051	-	73	54.140	ENSSLDG00000003718	hnrnpa1a	77	54.037	Seriola_lalandi_dorsalis
ENSCSEG00000014051	-	70	54.651	ENSSPAG00000018518	-	65	54.651	Stegastes_partitus
ENSCSEG00000014051	-	76	51.613	ENSTRUG00000020491	-	64	51.892	Takifugu_rubripes
ENSCSEG00000014051	-	72	80.682	ENSTNIG00000007398	-	72	76.190	Tetraodon_nigroviridis
ENSCSEG00000014051	-	71	54.902	ENSXCOG00000009001	-	79	54.190	Xiphophorus_couchianus
ENSCSEG00000014051	-	73	53.672	ENSXMAG00000008076	-	54	54.190	Xiphophorus_maculatus