EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000014153 (Gene tree)
Gene ID: 103389783
Gene Symbol: eif5b
Alias: im:6912504|si:ch211-254d18.3
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 8688 bases
Position: chr14:15998981-16007668
Accession: 103389783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000022202	IF-2	PF11987.8	4e-19	1	1
ENSCSEP00000022202	GTP_EFTU	PF00009.27	1.1e-31	1	1
ENSCSEP00000022202	MMR_HSR1	PF01926.23	2.5e-07	1	1
ENSCSEP00000022202	GTP_EFTU_D2	PF03144.25	2.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000022483	-	3756	XM_008325349	ENSCSEP00000022202	1209 (aa)	XP_008323571	UPI000495980F

Gene Model

Click here to download ENSCSEG00000014153's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014153's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014153	eif5b	74	85.185	ENSAPOG00000004375	eif5b	52	92.777	Acanthochromis_polyacanthus
ENSCSEG00000014153	eif5b	81	84.770	ENSACIG00000024324	eif5b	62	92.295	Amphilophus_citrinellus
ENSCSEG00000014153	eif5b	100	78.414	ENSAOCG00000018386	eif5b	52	93.740	Amphiprion_ocellaris
ENSCSEG00000014153	eif5b	52	90.530	ENSATEG00000011451	-	63	90.530	Anabas_testudineus
ENSCSEG00000014153	eif5b	100	78.694	ENSATEG00000006765	eif5b	50	92.777	Anabas_testudineus
ENSCSEG00000014153	eif5b	74	80.739	ENSATEG00000011259	eif5b	63	92.777	Anabas_testudineus
ENSCSEG00000014153	eif5b	100	67.661	ENSACAG00000008305	-	52	88.103	Anolis_carolinensis
ENSCSEG00000014153	eif5b	52	93.900	ENSACLG00000005530	eif5b	64	93.900	Astatotilapia_calliptera
ENSCSEG00000014153	eif5b	99	70.796	ENSAMXG00000018383	eif5b	52	91.801	Astyanax_mexicanus
ENSCSEG00000014153	eif5b	51	57.878	WBGene00021857	iffb-1	58	57.878	Caenorhabditis_elegans
ENSCSEG00000014153	eif5b	98	63.792	ENSCAPG00000014619	-	51	82.637	Cavia_aperea
ENSCSEG00000014153	eif5b	100	67.039	ENSCPOG00000011967	-	51	87.460	Cavia_porcellus
ENSCSEG00000014153	eif5b	51	63.636	ENSCSAVG00000008808	-	66	63.636	Ciona_savignyi
ENSCSEG00000014153	eif5b	100	76.675	ENSCVAG00000019619	eif5b	52	93.098	Cyprinodon_variegatus
ENSCSEG00000014153	eif5b	74	82.867	ENSDARG00000016548	eif5b	70	83.110	Danio_rerio
ENSCSEG00000014153	eif5b	51	70.147	FBgn0026259	eIF5B	54	70.147	Drosophila_melanogaster
ENSCSEG00000014153	eif5b	51	90.792	ENSELUG00000001132	eif5b	58	90.792	Esox_lucius
ENSCSEG00000014153	eif5b	82	80.461	ENSGACG00000010536	eif5b	86	91.332	Gasterosteus_aculeatus
ENSCSEG00000014153	eif5b	51	88.746	ENSGAGG00000022242	-	92	88.746	Gopherus_agassizii
ENSCSEG00000014153	eif5b	74	86.083	ENSHBUG00000023319	eif5b	52	93.900	Haplochromis_burtoni
ENSCSEG00000014153	eif5b	100	75.700	ENSHCOG00000002807	eif5b	52	90.997	Hippocampus_comes
ENSCSEG00000014153	eif5b	100	72.195	ENSIPUG00000020910	eif5b	53	91.640	Ictalurus_punctatus
ENSCSEG00000014153	eif5b	100	78.197	ENSKMAG00000004325	eif5b	52	92.937	Kryptolebias_marmoratus
ENSCSEG00000014153	eif5b	89	74.954	ENSLBEG00000027090	eif5b	59	91.200	Labrus_bergylta
ENSCSEG00000014153	eif5b	100	79.055	ENSMAMG00000022568	eif5b	51	92.937	Mastacembelus_armatus
ENSCSEG00000014153	eif5b	74	86.083	ENSMZEG00005012696	eif5b	52	93.900	Maylandia_zebra
ENSCSEG00000014153	eif5b	89	66.637	ENSMODG00000001387	-	52	88.907	Monodelphis_domestica
ENSCSEG00000014153	eif5b	100	77.887	ENSMALG00000005862	eif5b	52	91.974	Monopterus_albus
ENSCSEG00000014153	eif5b	100	78.197	ENSONIG00000018749	eif5b	52	93.419	Oreochromis_niloticus
ENSCSEG00000014153	eif5b	99	64.715	ENSOANG00000004621	-	53	88.585	Ornithorhynchus_anatinus
ENSCSEG00000014153	eif5b	51	88.264	ENSOCUG00000021154	-	51	88.264	Oryctolagus_cuniculus
ENSCSEG00000014153	eif5b	100	77.896	ENSORLG00000001525	eif5b	53	93.419	Oryzias_latipes
ENSCSEG00000014153	eif5b	100	78.225	ENSORLG00020005327	eif5b	53	93.419	Oryzias_latipes_hni
ENSCSEG00000014153	eif5b	100	78.225	ENSORLG00015008949	eif5b	53	93.258	Oryzias_latipes_hsok
ENSCSEG00000014153	eif5b	66	84.864	ENSOMEG00000016539	eif5b	79	93.740	Oryzias_melastigma
ENSCSEG00000014153	eif5b	52	91.172	ENSPKIG00000011133	eif5b	51	91.172	Paramormyrops_kingsleyae
ENSCSEG00000014153	eif5b	58	76.404	ENSPSIG00000014914	-	57	89.583	Pelodiscus_sinensis
ENSCSEG00000014153	eif5b	74	63.616	ENSPMAG00000004508	eif5b	52	74.277	Petromyzon_marinus
ENSCSEG00000014153	eif5b	61	84.709	ENSPFOG00000007543	eif5b	90	91.725	Poecilia_formosa
ENSCSEG00000014153	eif5b	100	75.980	ENSPLAG00000015913	eif5b	52	92.295	Poecilia_latipinna
ENSCSEG00000014153	eif5b	83	81.548	ENSPMEG00000006712	eif5b	52	92.295	Poecilia_mexicana
ENSCSEG00000014153	eif5b	66	70.574	ENSPCAG00000007829	-	52	81.833	Procavia_capensis
ENSCSEG00000014153	eif5b	92	82.532	ENSPCOG00000019508	-	99	88.387	Propithecus_coquereli
ENSCSEG00000014153	eif5b	92	82.195	ENSPNYG00000021051	eif5b	64	93.740	Pundamilia_nyererei
ENSCSEG00000014153	eif5b	74	82.812	ENSPNAG00000023852	eif5b	51	92.605	Pygocentrus_nattereri
ENSCSEG00000014153	eif5b	52	91.172	ENSSFOG00015000594	eif5b	51	91.172	Scleropages_formosus
ENSCSEG00000014153	eif5b	82	76.962	ENSSMAG00000000045	eif5b	61	91.172	Scophthalmus_maximus
ENSCSEG00000014153	eif5b	70	86.407	ENSSDUG00000005847	eif5b	82	85.781	Seriola_dumerili
ENSCSEG00000014153	eif5b	70	86.288	ENSSLDG00000013738	eif5b	83	85.664	Seriola_lalandi_dorsalis
ENSCSEG00000014153	eif5b	85	70.000	ENSSPAG00000005335	eif5b	61	88.604	Stegastes_partitus
ENSCSEG00000014153	eif5b	76	77.778	ENSTNIG00000006580	eif5b	69	91.653	Tetraodon_nigroviridis
ENSCSEG00000014153	eif5b	74	80.984	ENSXCOG00000016681	eif5b	89	91.054	Xiphophorus_couchianus
ENSCSEG00000014153	eif5b	74	80.942	ENSXMAG00000001002	eif5b	89	91.026	Xiphophorus_maculatus