EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000014237 (Gene tree)
Gene ID: 103396448
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 19850 bases
Position: chr20:9458574-9478423
Accession: 103396448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000022373	RRM_1	PF00076.22	5.6e-12	1	1
ENSCSEP00000022368	RRM_1	PF00076.22	6.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000022658	-	850	-	ENSCSEP00000022373	274 (aa)	-	-
ENSCSET00000022653	-	2488	XM_008334533	ENSCSEP00000022368	289 (aa)	XP_016897556	UPI000494EC1C

Gene Model

Click here to download ENSCSEG00000014237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000014237	-	82	52.479	ENSCSEG00000021349	-	82	49.817
ENSCSEG00000014237	-	73	52.727	ENSCSEG00000019769	-	69	53.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014237	-	100	82.877	ENSAPOG00000008744	-	100	82.877	Acanthochromis_polyacanthus
ENSCSEG00000014237	-	97	72.852	ENSACIG00000007143	-	97	72.852	Amphilophus_citrinellus
ENSCSEG00000014237	-	100	67.905	ENSAOCG00000001605	-	100	68.243	Amphiprion_ocellaris
ENSCSEG00000014237	-	100	83.219	ENSAOCG00000023599	-	100	83.219	Amphiprion_ocellaris
ENSCSEG00000014237	-	85	68.980	ENSATEG00000023356	-	93	69.388	Anabas_testudineus
ENSCSEG00000014237	-	98	73.579	ENSATEG00000022219	-	93	78.305	Anabas_testudineus
ENSCSEG00000014237	-	100	66.554	ENSACLG00000006949	-	100	67.677	Astatotilapia_calliptera
ENSCSEG00000014237	-	100	81.849	ENSACLG00000011720	-	100	81.849	Astatotilapia_calliptera
ENSCSEG00000014237	-	100	66.554	ENSAMXG00000019031	-	100	66.554	Astyanax_mexicanus
ENSCSEG00000014237	-	100	59.259	ENSAMXG00000032617	-	100	59.596	Astyanax_mexicanus
ENSCSEG00000014237	-	100	67.230	ENSCVAG00000018104	-	100	67.568	Cyprinodon_variegatus
ENSCSEG00000014237	-	100	83.562	ENSCVAG00000013624	-	100	83.562	Cyprinodon_variegatus
ENSCSEG00000014237	-	64	70.109	ENSDARG00000090292	ralyl	81	75.926	Danio_rerio
ENSCSEG00000014237	-	93	58.672	ENSELUG00000001702	-	95	59.779	Esox_lucius
ENSCSEG00000014237	-	57	70.303	ENSGMOG00000005914	-	100	70.303	Gadus_morhua
ENSCSEG00000014237	-	61	75.843	ENSGACG00000004991	-	91	79.518	Gasterosteus_aculeatus
ENSCSEG00000014237	-	100	66.554	ENSHBUG00000015412	-	100	67.677	Haplochromis_burtoni
ENSCSEG00000014237	-	100	82.192	ENSHBUG00000010040	-	100	82.192	Haplochromis_burtoni
ENSCSEG00000014237	-	100	67.230	ENSIPUG00000000507	ralyl	100	66.892	Ictalurus_punctatus
ENSCSEG00000014237	-	100	82.007	ENSKMAG00000022093	-	100	82.007	Kryptolebias_marmoratus
ENSCSEG00000014237	-	100	66.554	ENSKMAG00000018155	-	100	66.892	Kryptolebias_marmoratus
ENSCSEG00000014237	-	100	68.013	ENSLBEG00000011011	-	100	67.905	Labrus_bergylta
ENSCSEG00000014237	-	100	80.479	ENSLBEG00000012873	-	100	80.479	Labrus_bergylta
ENSCSEG00000014237	-	100	63.176	ENSLOCG00000012787	ralyl	99	62.162	Lepisosteus_oculatus
ENSCSEG00000014237	-	99	76.552	ENSMAMG00000001723	-	97	74.138	Mastacembelus_armatus
ENSCSEG00000014237	-	98	64.407	ENSMZEG00005018748	-	99	65.085	Maylandia_zebra
ENSCSEG00000014237	-	100	81.849	ENSMZEG00005024447	-	100	81.849	Maylandia_zebra
ENSCSEG00000014237	-	97	72.635	ENSMMOG00000020441	-	86	75.000	Mola_mola
ENSCSEG00000014237	-	100	66.554	ENSMALG00000012952	-	100	66.892	Monopterus_albus
ENSCSEG00000014237	-	100	81.849	ENSMALG00000019019	-	78	81.849	Monopterus_albus
ENSCSEG00000014237	-	97	72.509	ENSNBRG00000011206	-	97	72.509	Neolamprologus_brichardi
ENSCSEG00000014237	-	98	65.085	ENSNBRG00000011376	-	99	65.424	Neolamprologus_brichardi
ENSCSEG00000014237	-	100	77.740	ENSORLG00000017934	-	100	77.397	Oryzias_latipes
ENSCSEG00000014237	-	100	67.905	ENSORLG00000012719	-	100	68.243	Oryzias_latipes
ENSCSEG00000014237	-	100	67.905	ENSORLG00020004438	-	100	68.243	Oryzias_latipes_hni
ENSCSEG00000014237	-	100	76.712	ENSORLG00020000082	-	100	76.370	Oryzias_latipes_hni
ENSCSEG00000014237	-	100	68.243	ENSORLG00015004727	-	100	68.581	Oryzias_latipes_hsok
ENSCSEG00000014237	-	100	77.397	ENSORLG00015004280	-	100	77.055	Oryzias_latipes_hsok
ENSCSEG00000014237	-	100	81.443	ENSOMEG00000011821	-	100	81.443	Oryzias_melastigma
ENSCSEG00000014237	-	100	67.568	ENSOMEG00000001170	-	100	67.905	Oryzias_melastigma
ENSCSEG00000014237	-	100	67.677	ENSPKIG00000015926	-	100	67.918	Paramormyrops_kingsleyae
ENSCSEG00000014237	-	94	72.085	ENSPMGG00000009532	-	94	70.318	Periophthalmus_magnuspinnatus
ENSCSEG00000014237	-	79	65.236	ENSPMGG00000014481	-	99	64.730	Periophthalmus_magnuspinnatus
ENSCSEG00000014237	-	97	78.231	ENSPFOG00000006120	-	99	78.231	Poecilia_formosa
ENSCSEG00000014237	-	98	78.309	ENSPLAG00000009877	-	77	78.309	Poecilia_latipinna
ENSCSEG00000014237	-	97	66.897	ENSPLAG00000011323	ralyl	100	67.241	Poecilia_latipinna
ENSCSEG00000014237	-	97	66.897	ENSPMEG00000023847	ralyl	100	67.241	Poecilia_mexicana
ENSCSEG00000014237	-	98	78.309	ENSPMEG00000013624	-	80	78.309	Poecilia_mexicana
ENSCSEG00000014237	-	97	65.862	ENSPREG00000001956	ralyl	100	66.552	Poecilia_reticulata
ENSCSEG00000014237	-	97	81.272	ENSPREG00000013805	-	100	76.282	Poecilia_reticulata
ENSCSEG00000014237	-	98	64.407	ENSPNYG00000003548	-	99	65.085	Pundamilia_nyererei
ENSCSEG00000014237	-	97	72.509	ENSPNYG00000008772	-	97	72.509	Pundamilia_nyererei
ENSCSEG00000014237	-	100	65.203	ENSPNAG00000000498	-	88	65.878	Pygocentrus_nattereri
ENSCSEG00000014237	-	100	60.751	ENSPNAG00000026098	-	100	60.751	Pygocentrus_nattereri
ENSCSEG00000014237	-	100	61.786	ENSSFOG00015004575	-	100	61.786	Scleropages_formosus
ENSCSEG00000014237	-	100	68.581	ENSSFOG00015009401	-	100	68.581	Scleropages_formosus
ENSCSEG00000014237	-	97	76.842	ENSSMAG00000015907	-	93	76.842	Scophthalmus_maximus
ENSCSEG00000014237	-	100	65.878	ENSSMAG00000005608	-	100	66.554	Scophthalmus_maximus
ENSCSEG00000014237	-	100	67.230	ENSSDUG00000007587	-	100	67.568	Seriola_dumerili
ENSCSEG00000014237	-	100	83.219	ENSSDUG00000012473	-	100	83.219	Seriola_dumerili
ENSCSEG00000014237	-	100	83.219	ENSSLDG00000011534	-	100	83.219	Seriola_lalandi_dorsalis
ENSCSEG00000014237	-	100	66.667	ENSSLDG00000020603	-	100	67.003	Seriola_lalandi_dorsalis
ENSCSEG00000014237	-	98	69.424	ENSSPAG00000013858	-	96	68.683	Stegastes_partitus
ENSCSEG00000014237	-	98	72.474	ENSTRUG00000003829	-	95	75.265	Takifugu_rubripes
ENSCSEG00000014237	-	97	72.789	ENSTNIG00000005594	-	99	72.789	Tetraodon_nigroviridis
ENSCSEG00000014237	-	100	59.060	ENSXETG00000017729	ralyl	99	59.396	Xenopus_tropicalis
ENSCSEG00000014237	-	97	64.765	ENSXCOG00000015156	-	93	65.101	Xiphophorus_couchianus
ENSCSEG00000014237	-	100	81.507	ENSXMAG00000007614	-	100	81.507	Xiphophorus_maculatus
ENSCSEG00000014237	-	100	67.905	ENSXMAG00000008396	-	100	68.243	Xiphophorus_maculatus