EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000014283 (Gene tree)
Gene ID: 103379148
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 11972 bases
Position: chr5:13148481-13160452
Accession: 103379148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000022441	Suf	PF05843.14	2.4e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000022726	-	2150	XM_008310607	ENSCSEP00000022441	715 (aa)	XP_008308829	UPI000495A129

Gene Model

Click here to download ENSCSEG00000014283's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014283's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014283	cstf3	100	91.074	ENSG00000176102	CSTF3	100	91.074	Homo_sapiens
ENSCSEG00000014283	cstf3	100	97.626	ENSAPOG00000014054	cstf3	100	97.626	Acanthochromis_polyacanthus
ENSCSEG00000014283	cstf3	99	91.537	ENSAMEG00000007187	CSTF3	98	91.537	Ailuropoda_melanoleuca
ENSCSEG00000014283	cstf3	87	92.135	ENSACIG00000005539	cstf3	100	92.135	Amphilophus_citrinellus
ENSCSEG00000014283	cstf3	100	97.486	ENSAOCG00000010930	cstf3	100	97.486	Amphiprion_ocellaris
ENSCSEG00000014283	cstf3	100	97.486	ENSAPEG00000007903	cstf3	100	97.486	Amphiprion_percula
ENSCSEG00000014283	cstf3	100	96.927	ENSATEG00000000190	cstf3	100	96.927	Anabas_testudineus
ENSCSEG00000014283	cstf3	99	91.525	ENSAPLG00000007217	CSTF3	100	91.525	Anas_platyrhynchos
ENSCSEG00000014283	cstf3	100	91.504	ENSACAG00000002823	CSTF3	100	91.504	Anolis_carolinensis
ENSCSEG00000014283	cstf3	100	91.074	ENSANAG00000020699	CSTF3	95	96.667	Aotus_nancymaae
ENSCSEG00000014283	cstf3	100	96.788	ENSACLG00000007820	cstf3	100	96.788	Astatotilapia_calliptera
ENSCSEG00000014283	cstf3	100	92.748	ENSAMXG00000014198	cstf3	100	93.026	Astyanax_mexicanus
ENSCSEG00000014283	cstf3	100	91.074	ENSBTAG00000008617	CSTF3	100	91.395	Bos_taurus
ENSCSEG00000014283	cstf3	97	47.305	WBGene00006307	suf-1	99	47.305	Caenorhabditis_elegans
ENSCSEG00000014283	cstf3	100	91.074	ENSCJAG00000005533	CSTF3	100	91.074	Callithrix_jacchus
ENSCSEG00000014283	cstf3	100	91.074	ENSCAFG00000007264	CSTF3	100	91.074	Canis_familiaris
ENSCSEG00000014283	cstf3	99	91.678	ENSCAFG00020002715	CSTF3	99	91.678	Canis_lupus_dingo
ENSCSEG00000014283	cstf3	98	90.185	ENSCHIG00000016418	CSTF3	100	91.040	Capra_hircus
ENSCSEG00000014283	cstf3	99	91.961	ENSTSYG00000000451	CSTF3	99	96.889	Carlito_syrichta
ENSCSEG00000014283	cstf3	83	88.863	ENSCAPG00000010958	CSTF3	98	88.863	Cavia_aperea
ENSCSEG00000014283	cstf3	100	91.213	ENSCPOG00000005545	CSTF3	100	91.304	Cavia_porcellus
ENSCSEG00000014283	cstf3	100	91.074	ENSCCAG00000024790	CSTF3	96	96.889	Cebus_capucinus
ENSCSEG00000014283	cstf3	100	91.074	ENSCATG00000007080	CSTF3	100	91.074	Cercocebus_atys
ENSCSEG00000014283	cstf3	100	91.074	ENSCLAG00000016179	CSTF3	100	91.074	Chinchilla_lanigera
ENSCSEG00000014283	cstf3	78	97.744	ENSCHOG00000002497	CSTF3	79	97.744	Choloepus_hoffmanni
ENSCSEG00000014283	cstf3	100	91.504	ENSCPBG00000006753	CSTF3	100	91.504	Chrysemys_picta_bellii
ENSCSEG00000014283	cstf3	99	61.925	ENSCING00000006401	-	98	61.667	Ciona_intestinalis
ENSCSEG00000014283	cstf3	98	61.322	ENSCSAVG00000004851	-	100	61.322	Ciona_savignyi
ENSCSEG00000014283	cstf3	100	91.074	ENSCANG00000035468	CSTF3	100	91.074	Colobus_angolensis_palliatus
ENSCSEG00000014283	cstf3	100	91.213	ENSCGRG00001014773	Cstf3	100	91.213	Cricetulus_griseus_chok1gshd
ENSCSEG00000014283	cstf3	100	91.213	ENSCGRG00000004142	Cstf3	100	91.213	Cricetulus_griseus_crigri
ENSCSEG00000014283	cstf3	100	95.810	ENSCVAG00000019739	cstf3	100	95.810	Cyprinodon_variegatus
ENSCSEG00000014283	cstf3	100	94.134	ENSDARG00000018904	cstf3	100	94.134	Danio_rerio
ENSCSEG00000014283	cstf3	99	91.396	ENSDNOG00000007366	CSTF3	99	91.396	Dasypus_novemcinctus
ENSCSEG00000014283	cstf3	99	84.344	ENSDORG00000005898	Cstf3	99	84.344	Dipodomys_ordii
ENSCSEG00000014283	cstf3	98	56.071	FBgn0003559	su(f)	98	56.071	Drosophila_melanogaster
ENSCSEG00000014283	cstf3	90	85.826	ENSETEG00000017097	CSTF3	90	85.826	Echinops_telfairi
ENSCSEG00000014283	cstf3	84	74.461	ENSEBUG00000015459	cstf3	96	74.461	Eptatretus_burgeri
ENSCSEG00000014283	cstf3	98	91.714	ENSEASG00005019884	CSTF3	97	96.889	Equus_asinus_asinus
ENSCSEG00000014283	cstf3	98	91.714	ENSECAG00000023338	CSTF3	97	96.889	Equus_caballus
ENSCSEG00000014283	cstf3	100	86.332	ENSEEUG00000015167	CSTF3	100	86.332	Erinaceus_europaeus
ENSCSEG00000014283	cstf3	100	94.693	ENSELUG00000023393	cstf3	100	94.693	Esox_lucius
ENSCSEG00000014283	cstf3	100	91.213	ENSFCAG00000030711	CSTF3	100	91.213	Felis_catus
ENSCSEG00000014283	cstf3	93	93.675	ENSFALG00000010764	CSTF3	100	90.630	Ficedula_albicollis
ENSCSEG00000014283	cstf3	100	91.213	ENSFDAG00000012082	CSTF3	100	91.213	Fukomys_damarensis
ENSCSEG00000014283	cstf3	100	95.810	ENSFHEG00000020623	cstf3	100	95.810	Fundulus_heteroclitus
ENSCSEG00000014283	cstf3	100	94.708	ENSGMOG00000012275	cstf3	100	94.708	Gadus_morhua
ENSCSEG00000014283	cstf3	100	90.808	ENSGALG00000011685	CSTF3	100	90.808	Gallus_gallus
ENSCSEG00000014283	cstf3	100	95.810	ENSGAFG00000002181	cstf3	100	95.810	Gambusia_affinis
ENSCSEG00000014283	cstf3	100	96.927	ENSGACG00000015997	cstf3	100	96.927	Gasterosteus_aculeatus
ENSCSEG00000014283	cstf3	100	91.504	ENSGAGG00000006200	CSTF3	100	91.504	Gopherus_agassizii
ENSCSEG00000014283	cstf3	99	85.896	ENSGGOG00000026591	CSTF3	96	92.000	Gorilla_gorilla
ENSCSEG00000014283	cstf3	100	96.927	ENSHBUG00000016656	cstf3	100	96.927	Haplochromis_burtoni
ENSCSEG00000014283	cstf3	100	91.213	ENSHGLG00000017834	CSTF3	100	91.213	Heterocephalus_glaber_female
ENSCSEG00000014283	cstf3	100	91.213	ENSHGLG00100018042	CSTF3	100	91.213	Heterocephalus_glaber_male
ENSCSEG00000014283	cstf3	98	93.608	ENSHCOG00000015218	cstf3	100	93.436	Hippocampus_comes
ENSCSEG00000014283	cstf3	100	93.296	ENSIPUG00000013170	CSTF3	100	93.296	Ictalurus_punctatus
ENSCSEG00000014283	cstf3	100	91.074	ENSSTOG00000013306	CSTF3	100	91.074	Ictidomys_tridecemlineatus
ENSCSEG00000014283	cstf3	99	81.487	ENSJJAG00000018430	Cstf3	99	81.487	Jaculus_jaculus
ENSCSEG00000014283	cstf3	100	94.693	ENSKMAG00000010916	cstf3	100	94.693	Kryptolebias_marmoratus
ENSCSEG00000014283	cstf3	100	97.207	ENSLBEG00000002306	cstf3	100	97.207	Labrus_bergylta
ENSCSEG00000014283	cstf3	100	91.061	ENSLACG00000017296	CSTF3	100	91.061	Latimeria_chalumnae
ENSCSEG00000014283	cstf3	100	93.445	ENSLOCG00000004415	cstf3	100	93.445	Lepisosteus_oculatus
ENSCSEG00000014283	cstf3	100	91.213	ENSLAFG00000008712	CSTF3	100	91.213	Loxodonta_africana
ENSCSEG00000014283	cstf3	100	91.074	ENSMFAG00000029516	CSTF3	100	91.074	Macaca_fascicularis
ENSCSEG00000014283	cstf3	100	91.074	ENSMMUG00000002542	CSTF3	100	91.074	Macaca_mulatta
ENSCSEG00000014283	cstf3	100	91.074	ENSMNEG00000021807	CSTF3	100	91.074	Macaca_nemestrina
ENSCSEG00000014283	cstf3	100	91.074	ENSMLEG00000039594	CSTF3	97	94.667	Mandrillus_leucophaeus
ENSCSEG00000014283	cstf3	100	97.067	ENSMAMG00000020423	cstf3	100	97.067	Mastacembelus_armatus
ENSCSEG00000014283	cstf3	100	96.788	ENSMZEG00005012082	cstf3	100	96.788	Maylandia_zebra
ENSCSEG00000014283	cstf3	99	91.139	ENSMGAG00000001383	CSTF3	99	91.139	Meleagris_gallopavo
ENSCSEG00000014283	cstf3	100	91.074	ENSMAUG00000002487	Cstf3	100	91.074	Mesocricetus_auratus
ENSCSEG00000014283	cstf3	100	90.795	ENSMICG00000004784	CSTF3	100	90.795	Microcebus_murinus
ENSCSEG00000014283	cstf3	100	91.213	ENSMOCG00000017583	Cstf3	100	91.213	Microtus_ochrogaster
ENSCSEG00000014283	cstf3	99	97.167	ENSMMOG00000016026	cstf3	94	97.167	Mola_mola
ENSCSEG00000014283	cstf3	100	80.893	ENSMODG00000025205	-	100	80.893	Monodelphis_domestica
ENSCSEG00000014283	cstf3	100	91.492	ENSMODG00000009745	-	100	91.492	Monodelphis_domestica
ENSCSEG00000014283	cstf3	100	97.207	ENSMALG00000012050	cstf3	100	97.207	Monopterus_albus
ENSCSEG00000014283	cstf3	100	91.213	MGP_CAROLIEiJ_G0024026	Cstf3	100	91.213	Mus_caroli
ENSCSEG00000014283	cstf3	100	91.213	ENSMUSG00000027176	Cstf3	100	91.213	Mus_musculus
ENSCSEG00000014283	cstf3	100	91.213	MGP_PahariEiJ_G0025464	Cstf3	100	91.213	Mus_pahari
ENSCSEG00000014283	cstf3	100	91.213	MGP_SPRETEiJ_G0024939	Cstf3	100	91.213	Mus_spretus
ENSCSEG00000014283	cstf3	100	90.934	ENSMPUG00000011457	CSTF3	100	90.934	Mustela_putorius_furo
ENSCSEG00000014283	cstf3	99	91.421	ENSMLUG00000003073	-	99	91.421	Myotis_lucifugus
ENSCSEG00000014283	cstf3	100	88.703	ENSMLUG00000026022	-	100	88.703	Myotis_lucifugus
ENSCSEG00000014283	cstf3	100	91.353	ENSNGAG00000010677	Cstf3	100	91.353	Nannospalax_galili
ENSCSEG00000014283	cstf3	87	97.111	ENSNBRG00000007345	cstf3	100	97.111	Neolamprologus_brichardi
ENSCSEG00000014283	cstf3	100	91.074	ENSNLEG00000017901	CSTF3	97	94.444	Nomascus_leucogenys
ENSCSEG00000014283	cstf3	73	90.249	ENSMEUG00000005640	-	100	90.249	Notamacropus_eugenii
ENSCSEG00000014283	cstf3	67	92.000	ENSOPRG00000000199	-	67	92.000	Ochotona_princeps
ENSCSEG00000014283	cstf3	100	91.353	ENSODEG00000016737	-	100	91.353	Octodon_degus
ENSCSEG00000014283	cstf3	89	79.403	ENSODEG00000006311	-	97	79.403	Octodon_degus
ENSCSEG00000014283	cstf3	100	96.788	ENSONIG00000005563	cstf3	100	96.788	Oreochromis_niloticus
ENSCSEG00000014283	cstf3	90	90.308	ENSOANG00000015140	CSTF3	100	90.308	Ornithorhynchus_anatinus
ENSCSEG00000014283	cstf3	100	91.074	ENSOCUG00000015417	CSTF3	100	91.074	Oryctolagus_cuniculus
ENSCSEG00000014283	cstf3	100	95.524	ENSORLG00000009762	cstf3	100	95.524	Oryzias_latipes
ENSCSEG00000014283	cstf3	100	95.524	ENSORLG00020005540	cstf3	100	95.524	Oryzias_latipes_hni
ENSCSEG00000014283	cstf3	100	95.385	ENSORLG00015003551	cstf3	100	95.385	Oryzias_latipes_hsok
ENSCSEG00000014283	cstf3	100	96.224	ENSOMEG00000003848	cstf3	100	96.224	Oryzias_melastigma
ENSCSEG00000014283	cstf3	100	90.694	ENSOGAG00000010229	CSTF3	100	90.694	Otolemur_garnettii
ENSCSEG00000014283	cstf3	90	91.135	ENSOARG00000017271	CSTF3	99	91.135	Ovis_aries
ENSCSEG00000014283	cstf3	99	88.293	ENSPPAG00000027358	CSTF3	99	88.293	Pan_paniscus
ENSCSEG00000014283	cstf3	100	91.213	ENSPPRG00000016852	CSTF3	100	91.213	Panthera_pardus
ENSCSEG00000014283	cstf3	100	91.213	ENSPTIG00000008716	CSTF3	100	91.213	Panthera_tigris_altaica
ENSCSEG00000014283	cstf3	100	91.074	ENSPTRG00000003485	CSTF3	100	91.074	Pan_troglodytes
ENSCSEG00000014283	cstf3	100	91.074	ENSPANG00000013722	CSTF3	97	94.667	Papio_anubis
ENSCSEG00000014283	cstf3	100	93.296	ENSPKIG00000023648	cstf3	100	93.296	Paramormyrops_kingsleyae
ENSCSEG00000014283	cstf3	100	91.504	ENSPSIG00000009173	CSTF3	100	91.504	Pelodiscus_sinensis
ENSCSEG00000014283	cstf3	77	98.172	ENSPMGG00000000164	cstf3	99	98.172	Periophthalmus_magnuspinnatus
ENSCSEG00000014283	cstf3	100	91.074	ENSPEMG00000011481	Cstf3	100	91.074	Peromyscus_maniculatus_bairdii
ENSCSEG00000014283	cstf3	99	78.273	ENSPMAG00000007282	cstf3	99	78.442	Petromyzon_marinus
ENSCSEG00000014283	cstf3	99	89.859	ENSPCIG00000026406	-	100	91.520	Phascolarctos_cinereus
ENSCSEG00000014283	cstf3	100	76.741	ENSPCIG00000030419	-	90	77.019	Phascolarctos_cinereus
ENSCSEG00000014283	cstf3	100	95.810	ENSPFOG00000017239	cstf3	100	95.810	Poecilia_formosa
ENSCSEG00000014283	cstf3	100	95.950	ENSPLAG00000009456	cstf3	100	95.950	Poecilia_latipinna
ENSCSEG00000014283	cstf3	100	95.810	ENSPMEG00000010320	cstf3	100	95.810	Poecilia_mexicana
ENSCSEG00000014283	cstf3	100	95.670	ENSPREG00000013549	cstf3	100	95.670	Poecilia_reticulata
ENSCSEG00000014283	cstf3	100	91.074	ENSPPYG00000003375	CSTF3	100	91.074	Pongo_abelii
ENSCSEG00000014283	cstf3	71	96.516	ENSPCAG00000008025	-	71	96.516	Procavia_capensis
ENSCSEG00000014283	cstf3	100	85.635	ENSPCOG00000014417	CSTF3	100	85.635	Propithecus_coquereli
ENSCSEG00000014283	cstf3	100	86.053	ENSPVAG00000002350	CSTF3	100	86.053	Pteropus_vampyrus
ENSCSEG00000014283	cstf3	100	96.927	ENSPNYG00000018259	cstf3	100	96.927	Pundamilia_nyererei
ENSCSEG00000014283	cstf3	100	94.553	ENSPNAG00000020182	cstf3	100	94.553	Pygocentrus_nattereri
ENSCSEG00000014283	cstf3	87	90.560	ENSRNOG00000012089	Cstf3	100	90.560	Rattus_norvegicus
ENSCSEG00000014283	cstf3	99	90.268	ENSRBIG00000044258	CSTF3	100	91.040	Rhinopithecus_bieti
ENSCSEG00000014283	cstf3	100	91.074	ENSRROG00000043450	CSTF3	100	91.074	Rhinopithecus_roxellana
ENSCSEG00000014283	cstf3	100	91.074	ENSSBOG00000024764	CSTF3	98	96.889	Saimiri_boliviensis_boliviensis
ENSCSEG00000014283	cstf3	100	90.934	ENSSHAG00000018128	-	100	90.934	Sarcophilus_harrisii
ENSCSEG00000014283	cstf3	100	82.008	ENSSHAG00000003135	-	99	82.008	Sarcophilus_harrisii
ENSCSEG00000014283	cstf3	100	93.296	ENSSFOG00015022133	cstf3	100	93.296	Scleropages_formosus
ENSCSEG00000014283	cstf3	100	97.207	ENSSMAG00000002197	cstf3	100	97.207	Scophthalmus_maximus
ENSCSEG00000014283	cstf3	100	97.486	ENSSDUG00000020426	cstf3	100	97.486	Seriola_dumerili
ENSCSEG00000014283	cstf3	100	97.486	ENSSLDG00000025649	cstf3	100	97.486	Seriola_lalandi_dorsalis
ENSCSEG00000014283	cstf3	100	90.795	ENSSARG00000000391	CSTF3	100	90.795	Sorex_araneus
ENSCSEG00000014283	cstf3	96	91.462	ENSSPUG00000010546	CSTF3	100	91.462	Sphenodon_punctatus
ENSCSEG00000014283	cstf3	100	97.626	ENSSPAG00000004958	cstf3	100	97.626	Stegastes_partitus
ENSCSEG00000014283	cstf3	99	90.642	ENSSSCG00000040954	CSTF3	100	90.642	Sus_scrofa
ENSCSEG00000014283	cstf3	99	91.525	ENSTGUG00000005010	CSTF3	100	91.525	Taeniopygia_guttata
ENSCSEG00000014283	cstf3	100	95.391	ENSTRUG00000004959	cstf3	100	95.391	Takifugu_rubripes
ENSCSEG00000014283	cstf3	99	96.317	ENSTNIG00000013811	cstf3	98	96.317	Tetraodon_nigroviridis
ENSCSEG00000014283	cstf3	90	88.629	ENSTBEG00000001544	CSTF3	90	88.629	Tupaia_belangeri
ENSCSEG00000014283	cstf3	100	88.285	ENSTTRG00000016366	CSTF3	100	88.285	Tursiops_truncatus
ENSCSEG00000014283	cstf3	99	91.396	ENSUMAG00000018971	CSTF3	100	90.720	Ursus_maritimus
ENSCSEG00000014283	cstf3	100	90.934	ENSVPAG00000007800	CSTF3	100	90.934	Vicugna_pacos
ENSCSEG00000014283	cstf3	99	91.678	ENSVVUG00000014938	CSTF3	100	91.040	Vulpes_vulpes
ENSCSEG00000014283	cstf3	66	42.443	ENSXETG00000017946	-	99	42.443	Xenopus_tropicalis
ENSCSEG00000014283	cstf3	88	75.000	ENSXETG00000021399	cstf3	100	76.214	Xenopus_tropicalis
ENSCSEG00000014283	cstf3	87	95.666	ENSXCOG00000011741	cstf3	100	95.666	Xiphophorus_couchianus
ENSCSEG00000014283	cstf3	100	95.810	ENSXMAG00000009545	cstf3	100	95.810	Xiphophorus_maculatus