EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000014308 (Gene tree)
Gene ID: 103395945
Gene Symbol: sf3a2
Alias: zgc:56097|zgc:77448
Full Name: splicing factor 3a subunit 2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 8504 bases
Position: chr20:2130295-2138798
Accession: 103395945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000022455	zf-met	PF12874.7	4.5e-07	1	1
ENSCSEP00000022446	zf-met	PF12874.7	4.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000022743	-	4599	XM_008333807	ENSCSEP00000022455	284 (aa)	XP_008332029	UPI000496A305
ENSCSET00000022734	-	2394	-	ENSCSEP00000022446	288 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000014308's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014308	sf3a2	79	93.304	ENSG00000104897	SF3A2	100	97.037	Homo_sapiens
ENSCSEG00000014308	sf3a2	84	94.979	ENSAPOG00000003916	sf3a2	89	92.366	Acanthochromis_polyacanthus
ENSCSEG00000014308	sf3a2	79	93.304	ENSAMEG00000005469	SF3A2	57	85.985	Ailuropoda_melanoleuca
ENSCSEG00000014308	sf3a2	84	94.142	ENSACIG00000018153	sf3a2	88	91.538	Amphilophus_citrinellus
ENSCSEG00000014308	sf3a2	84	94.979	ENSAOCG00000015960	sf3a2	89	92.366	Amphiprion_ocellaris
ENSCSEG00000014308	sf3a2	84	94.979	ENSAPEG00000012336	sf3a2	89	92.366	Amphiprion_percula
ENSCSEG00000014308	sf3a2	84	94.142	ENSATEG00000015449	sf3a2	89	91.603	Anabas_testudineus
ENSCSEG00000014308	sf3a2	65	96.216	ENSANAG00000034031	-	89	96.216	Aotus_nancymaae
ENSCSEG00000014308	sf3a2	90	91.829	ENSACLG00000002356	sf3a2	88	91.923	Astatotilapia_calliptera
ENSCSEG00000014308	sf3a2	84	92.887	ENSAMXG00000032428	sf3a2	87	88.593	Astyanax_mexicanus
ENSCSEG00000014308	sf3a2	79	93.304	ENSBTAG00000025452	SF3A2	55	85.985	Bos_taurus
ENSCSEG00000014308	sf3a2	76	79.630	WBGene00008683	repo-1	97	79.630	Caenorhabditis_elegans
ENSCSEG00000014308	sf3a2	79	93.304	ENSCJAG00000013206	-	57	85.985	Callithrix_jacchus
ENSCSEG00000014308	sf3a2	79	93.304	ENSCAFG00000019414	SF3A2	55	85.985	Canis_familiaris
ENSCSEG00000014308	sf3a2	79	93.304	ENSCAFG00020018153	SF3A2	55	85.985	Canis_lupus_dingo
ENSCSEG00000014308	sf3a2	79	93.304	ENSCHIG00000018323	SF3A2	55	85.985	Capra_hircus
ENSCSEG00000014308	sf3a2	64	96.154	ENSCAPG00000003402	-	90	96.154	Cavia_aperea
ENSCSEG00000014308	sf3a2	79	93.304	ENSCPOG00000032868	SF3A2	59	85.985	Cavia_porcellus
ENSCSEG00000014308	sf3a2	79	93.304	ENSCCAG00000009812	SF3A2	87	95.676	Cebus_capucinus
ENSCSEG00000014308	sf3a2	79	93.304	ENSCATG00000038453	SF3A2	57	85.985	Cercocebus_atys
ENSCSEG00000014308	sf3a2	79	93.304	ENSCLAG00000008987	SF3A2	59	85.985	Chinchilla_lanigera
ENSCSEG00000014308	sf3a2	79	93.304	ENSCSAG00000011717	SF3A2	56	85.985	Chlorocebus_sabaeus
ENSCSEG00000014308	sf3a2	79	93.333	ENSCPBG00000018569	SF3A2	84	85.768	Chrysemys_picta_bellii
ENSCSEG00000014308	sf3a2	85	79.339	ENSCING00000003319	zf(matrin)-2	70	75.862	Ciona_intestinalis
ENSCSEG00000014308	sf3a2	84	79.412	ENSCSAVG00000007862	-	77	69.896	Ciona_savignyi
ENSCSEG00000014308	sf3a2	79	93.304	ENSCANG00000024451	SF3A2	57	85.985	Colobus_angolensis_palliatus
ENSCSEG00000014308	sf3a2	79	93.304	ENSCGRG00001001802	Sf3a2	54	85.985	Cricetulus_griseus_chok1gshd
ENSCSEG00000014308	sf3a2	79	93.304	ENSCGRG00000011089	Sf3a2	94	96.154	Cricetulus_griseus_crigri
ENSCSEG00000014308	sf3a2	90	90.698	ENSCVAG00000021349	sf3a2	88	91.154	Cyprinodon_variegatus
ENSCSEG00000014308	sf3a2	84	91.632	ENSDARG00000021107	sf3a2	93	87.308	Danio_rerio
ENSCSEG00000014308	sf3a2	79	93.750	ENSDORG00000014445	Sf3a2	57	86.364	Dipodomys_ordii
ENSCSEG00000014308	sf3a2	76	83.333	FBgn0036314	Sf3a2	98	74.131	Drosophila_melanogaster
ENSCSEG00000014308	sf3a2	79	93.304	ENSEASG00005021972	SF3A2	57	85.985	Equus_asinus_asinus
ENSCSEG00000014308	sf3a2	84	94.561	ENSELUG00000008471	sf3a2	86	91.603	Esox_lucius
ENSCSEG00000014308	sf3a2	79	92.857	ENSFCAG00000030476	SF3A2	60	85.606	Felis_catus
ENSCSEG00000014308	sf3a2	66	95.187	ENSFALG00000013785	-	62	83.058	Ficedula_albicollis
ENSCSEG00000014308	sf3a2	64	96.154	ENSFDAG00000020911	-	93	96.154	Fukomys_damarensis
ENSCSEG00000014308	sf3a2	90	91.120	ENSFHEG00000002392	sf3a2	89	91.221	Fundulus_heteroclitus
ENSCSEG00000014308	sf3a2	84	92.887	ENSGMOG00000012186	sf3a2	87	89.313	Gadus_morhua
ENSCSEG00000014308	sf3a2	76	94.907	ENSGALG00000021679	SF3A2	84	86.038	Gallus_gallus
ENSCSEG00000014308	sf3a2	85	92.917	ENSGAFG00000008478	sf3a2	89	90.458	Gambusia_affinis
ENSCSEG00000014308	sf3a2	84	95.397	ENSGACG00000015255	sf3a2	89	91.538	Gasterosteus_aculeatus
ENSCSEG00000014308	sf3a2	63	92.179	ENSGAGG00000008500	SF3A2	82	83.258	Gopherus_agassizii
ENSCSEG00000014308	sf3a2	79	93.304	ENSGGOG00000006613	SF3A2	57	85.985	Gorilla_gorilla
ENSCSEG00000014308	sf3a2	90	91.829	ENSHBUG00000021796	sf3a2	88	91.923	Haplochromis_burtoni
ENSCSEG00000014308	sf3a2	79	93.304	ENSHGLG00000015102	SF3A2	88	96.175	Heterocephalus_glaber_female
ENSCSEG00000014308	sf3a2	79	93.304	ENSHGLG00100000418	SF3A2	88	96.175	Heterocephalus_glaber_male
ENSCSEG00000014308	sf3a2	92	91.635	ENSHCOG00000001223	sf3a2	89	92.636	Hippocampus_comes
ENSCSEG00000014308	sf3a2	84	90.795	ENSIPUG00000019071	sf3a2	88	86.260	Ictalurus_punctatus
ENSCSEG00000014308	sf3a2	79	93.304	ENSSTOG00000007495	SF3A2	90	88.525	Ictidomys_tridecemlineatus
ENSCSEG00000014308	sf3a2	79	93.750	ENSJJAG00000010635	Sf3a2	96	95.135	Jaculus_jaculus
ENSCSEG00000014308	sf3a2	85	93.333	ENSKMAG00000006295	sf3a2	89	90.076	Kryptolebias_marmoratus
ENSCSEG00000014308	sf3a2	90	91.506	ENSLBEG00000000677	sf3a2	89	91.221	Labrus_bergylta
ENSCSEG00000014308	sf3a2	76	94.444	ENSLACG00000008744	SF3A2	85	86.415	Latimeria_chalumnae
ENSCSEG00000014308	sf3a2	82	93.966	ENSLOCG00000005835	sf3a2	85	89.354	Lepisosteus_oculatus
ENSCSEG00000014308	sf3a2	79	93.304	ENSMFAG00000002638	SF3A2	57	85.985	Macaca_fascicularis
ENSCSEG00000014308	sf3a2	79	93.304	ENSMMUG00000010111	SF3A2	58	85.985	Macaca_mulatta
ENSCSEG00000014308	sf3a2	79	93.304	ENSMNEG00000036916	SF3A2	56	85.985	Macaca_nemestrina
ENSCSEG00000014308	sf3a2	84	95.397	ENSMAMG00000009881	sf3a2	89	93.130	Mastacembelus_armatus
ENSCSEG00000014308	sf3a2	90	91.829	ENSMZEG00005025609	sf3a2	88	91.923	Maylandia_zebra
ENSCSEG00000014308	sf3a2	76	94.907	ENSMGAG00000001950	SF3A2	84	86.038	Meleagris_gallopavo
ENSCSEG00000014308	sf3a2	64	96.154	ENSMAUG00000005644	-	94	96.154	Mesocricetus_auratus
ENSCSEG00000014308	sf3a2	79	93.304	ENSMICG00000015443	SF3A2	57	85.985	Microcebus_murinus
ENSCSEG00000014308	sf3a2	79	93.304	ENSMOCG00000007216	Sf3a2	57	85.985	Microtus_ochrogaster
ENSCSEG00000014308	sf3a2	90	83.398	ENSMMOG00000010657	sf3a2	94	83.588	Mola_mola
ENSCSEG00000014308	sf3a2	76	94.444	ENSMODG00000004681	SF3A2	53	85.985	Monodelphis_domestica
ENSCSEG00000014308	sf3a2	84	94.561	ENSMALG00000020442	sf3a2	89	90.840	Monopterus_albus
ENSCSEG00000014308	sf3a2	79	93.304	MGP_CAROLIEiJ_G0015602	-	94	96.154	Mus_caroli
ENSCSEG00000014308	sf3a2	79	93.304	ENSMUSG00000020211	Sf3a2	94	96.154	Mus_musculus
ENSCSEG00000014308	sf3a2	79	93.304	MGP_PahariEiJ_G0031015	-	94	96.154	Mus_pahari
ENSCSEG00000014308	sf3a2	79	93.304	MGP_SPRETEiJ_G0016420	-	94	96.154	Mus_spretus
ENSCSEG00000014308	sf3a2	79	92.857	ENSMPUG00000006956	SF3A2	57	85.606	Mustela_putorius_furo
ENSCSEG00000014308	sf3a2	79	92.857	ENSMLUG00000004426	-	60	85.606	Myotis_lucifugus
ENSCSEG00000014308	sf3a2	64	95.604	ENSNGAG00000023309	-	94	95.604	Nannospalax_galili
ENSCSEG00000014308	sf3a2	87	92.308	ENSNBRG00000019872	sf3a2	88	91.538	Neolamprologus_brichardi
ENSCSEG00000014308	sf3a2	66	94.118	ENSODEG00000013722	-	100	94.118	Octodon_degus
ENSCSEG00000014308	sf3a2	87	92.308	ENSONIG00000010198	sf3a2	88	91.923	Oreochromis_niloticus
ENSCSEG00000014308	sf3a2	72	93.659	ENSOANG00000013649	-	98	93.204	Ornithorhynchus_anatinus
ENSCSEG00000014308	sf3a2	92	90.114	ENSORLG00000015301	sf3a2	89	89.961	Oryzias_latipes
ENSCSEG00000014308	sf3a2	92	90.114	ENSORLG00020017235	sf3a2	89	89.961	Oryzias_latipes_hni
ENSCSEG00000014308	sf3a2	85	90.871	ENSORLG00015017116	sf3a2	89	89.615	Oryzias_latipes_hsok
ENSCSEG00000014308	sf3a2	85	92.116	ENSOMEG00000020860	sf3a2	89	90.385	Oryzias_melastigma
ENSCSEG00000014308	sf3a2	79	93.304	ENSOGAG00000033389	SF3A2	57	85.985	Otolemur_garnettii
ENSCSEG00000014308	sf3a2	79	93.304	ENSOARG00000014357	SF3A2	65	85.985	Ovis_aries
ENSCSEG00000014308	sf3a2	79	78.125	ENSPPAG00000037864	-	56	73.106	Pan_paniscus
ENSCSEG00000014308	sf3a2	79	92.857	ENSPPRG00000007798	SF3A2	56	85.606	Panthera_pardus
ENSCSEG00000014308	sf3a2	79	93.304	ENSPTRG00000010227	SF3A2	57	85.985	Pan_troglodytes
ENSCSEG00000014308	sf3a2	79	93.304	ENSPANG00000007949	SF3A2	57	85.985	Papio_anubis
ENSCSEG00000014308	sf3a2	84	92.469	ENSPKIG00000009487	sf3a2	83	88.593	Paramormyrops_kingsleyae
ENSCSEG00000014308	sf3a2	79	92.070	ENSPSIG00000010839	SF3A2	85	84.015	Pelodiscus_sinensis
ENSCSEG00000014308	sf3a2	76	97.222	ENSPMGG00000017249	sf3a2	90	91.538	Periophthalmus_magnuspinnatus
ENSCSEG00000014308	sf3a2	79	93.304	ENSPEMG00000021288	Sf3a2	57	85.985	Peromyscus_maniculatus_bairdii
ENSCSEG00000014308	sf3a2	85	92.562	ENSPFOG00000015945	sf3a2	89	90.458	Poecilia_formosa
ENSCSEG00000014308	sf3a2	85	92.562	ENSPLAG00000010052	sf3a2	89	90.458	Poecilia_latipinna
ENSCSEG00000014308	sf3a2	85	92.562	ENSPMEG00000000184	sf3a2	89	90.458	Poecilia_mexicana
ENSCSEG00000014308	sf3a2	85	92.562	ENSPREG00000017808	sf3a2	89	90.076	Poecilia_reticulata
ENSCSEG00000014308	sf3a2	79	93.304	ENSPPYG00000009342	SF3A2	66	78.405	Pongo_abelii
ENSCSEG00000014308	sf3a2	69	94.898	ENSPCAG00000014513	SF3A2	57	77.528	Procavia_capensis
ENSCSEG00000014308	sf3a2	79	93.304	ENSPCOG00000020295	SF3A2	59	85.985	Propithecus_coquereli
ENSCSEG00000014308	sf3a2	90	91.829	ENSPNYG00000006928	sf3a2	88	91.923	Pundamilia_nyererei
ENSCSEG00000014308	sf3a2	84	92.469	ENSPNAG00000027582	sf3a2	87	88.213	Pygocentrus_nattereri
ENSCSEG00000014308	sf3a2	79	92.857	ENSRNOG00000019349	Sf3a2	56	85.606	Rattus_norvegicus
ENSCSEG00000014308	sf3a2	79	93.304	ENSRBIG00000026709	SF3A2	58	85.985	Rhinopithecus_bieti
ENSCSEG00000014308	sf3a2	79	93.304	ENSRROG00000034440	SF3A2	56	85.985	Rhinopithecus_roxellana
ENSCSEG00000014308	sf3a2	79	77.679	ENSSBOG00000026071	SF3A2	53	72.659	Saimiri_boliviensis_boliviensis
ENSCSEG00000014308	sf3a2	76	93.981	ENSSHAG00000011677	-	99	87.600	Sarcophilus_harrisii
ENSCSEG00000014308	sf3a2	68	84.375	ENSSHAG00000011646	-	86	77.083	Sarcophilus_harrisii
ENSCSEG00000014308	sf3a2	92	88.931	ENSSFOG00015010920	sf3a2	75	88.636	Scleropages_formosus
ENSCSEG00000014308	sf3a2	85	94.191	ENSSMAG00000002629	sf3a2	90	91.506	Scophthalmus_maximus
ENSCSEG00000014308	sf3a2	87	92.771	ENSSDUG00000015810	sf3a2	90	92.366	Seriola_dumerili
ENSCSEG00000014308	sf3a2	87	92.771	ENSSLDG00000010874	sf3a2	90	92.366	Seriola_lalandi_dorsalis
ENSCSEG00000014308	sf3a2	84	94.979	ENSSPAG00000004960	sf3a2	89	92.366	Stegastes_partitus
ENSCSEG00000014308	sf3a2	79	93.750	ENSSSCG00000039757	SF3A2	57	86.364	Sus_scrofa
ENSCSEG00000014308	sf3a2	72	94.634	ENSTGUG00000000305	SF3A2	100	94.634	Taeniopygia_guttata
ENSCSEG00000014308	sf3a2	84	94.142	ENSTRUG00000009045	sf3a2	91	90.458	Takifugu_rubripes
ENSCSEG00000014308	sf3a2	84	93.724	ENSTNIG00000015318	sf3a2	91	90.458	Tetraodon_nigroviridis
ENSCSEG00000014308	sf3a2	79	77.232	ENSTTRG00000010177	-	57	72.348	Tursiops_truncatus
ENSCSEG00000014308	sf3a2	79	93.304	ENSVVUG00000002578	SF3A2	55	85.985	Vulpes_vulpes
ENSCSEG00000014308	sf3a2	84	90.417	ENSXETG00000024943	sf3a2	64	85.606	Xenopus_tropicalis
ENSCSEG00000014308	sf3a2	85	93.333	ENSXCOG00000008222	sf3a2	89	90.840	Xiphophorus_couchianus
ENSCSEG00000014308	sf3a2	85	93.333	ENSXMAG00000029068	sf3a2	89	90.840	Xiphophorus_maculatus