EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000014359 (Gene tree)
Gene ID: 103391577
Gene Symbol: -
Alias: rbm4l|wu:fc25a01
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 6997 bases
Position: chr1:33645947-33652943
Accession: 103391577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000022525	zf-CCHC	PF00098.23	3.2e-06	1	1
ENSCSEP00000022525	RRM_5	PF13893.6	7.8e-08	1	1
ENSCSEP00000022525	RRM_1	PF00076.22	6.3e-31	1	2
ENSCSEP00000022525	RRM_1	PF00076.22	6.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000022814	-	5187	XM_008327877	ENSCSEP00000022525	387 (aa)	XP_008326099	UPI000494E51D

Gene Model

Click here to download ENSCSEG00000014359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014359's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000014359	-	96	47.115	ENSCSEG00000014365	rbm4.1	97	46.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014359	-	98	49.415	ENSAPOG00000012353	rbm4.1	97	49.645	Acanthochromis_polyacanthus
ENSCSEG00000014359	-	97	48.325	ENSACIG00000016482	rbm4.1	99	49.173	Amphilophus_citrinellus
ENSCSEG00000014359	-	98	49.649	ENSAOCG00000010915	rbm4.1	97	50.358	Amphiprion_ocellaris
ENSCSEG00000014359	-	98	49.649	ENSAPEG00000009494	rbm4.1	97	50.358	Amphiprion_percula
ENSCSEG00000014359	-	97	49.048	ENSATEG00000001904	rbm4.1	96	50.120	Anabas_testudineus
ENSCSEG00000014359	-	97	48.086	ENSACLG00000007722	rbm4.1	99	48.936	Astatotilapia_calliptera
ENSCSEG00000014359	-	100	69.072	ENSACLG00000007740	-	100	69.666	Astatotilapia_calliptera
ENSCSEG00000014359	-	99	51.111	ENSAMXG00000036611	rbm4.1	99	53.181	Astyanax_mexicanus
ENSCSEG00000014359	-	94	48.900	ENSCVAG00000019349	rbm4.1	94	49.015	Cyprinodon_variegatus
ENSCSEG00000014359	-	99	51.435	ENSDARG00000036386	rbm4.1	99	51.429	Danio_rerio
ENSCSEG00000014359	-	99	50.370	ENSDARG00000055080	rbm4.2	99	55.584	Danio_rerio
ENSCSEG00000014359	-	99	50.233	ENSELUG00000013205	rbm4.1	99	51.537	Esox_lucius
ENSCSEG00000014359	-	94	48.500	ENSFHEG00000022926	rbm4.1	94	47.727	Fundulus_heteroclitus
ENSCSEG00000014359	-	100	63.683	ENSGMOG00000007455	-	100	67.430	Gadus_morhua
ENSCSEG00000014359	-	94	49.510	ENSGAFG00000019302	rbm4.1	94	49.751	Gambusia_affinis
ENSCSEG00000014359	-	98	48.706	ENSGACG00000000822	rbm4.1	98	48.009	Gasterosteus_aculeatus
ENSCSEG00000014359	-	100	67.526	ENSGACG00000000821	-	100	68.299	Gasterosteus_aculeatus
ENSCSEG00000014359	-	97	48.086	ENSHBUG00000011610	rbm4.1	99	48.936	Haplochromis_burtoni
ENSCSEG00000014359	-	92	48.062	ENSHCOG00000011403	rbm4.1	95	47.287	Hippocampus_comes
ENSCSEG00000014359	-	50	67.692	ENSIPUG00000022931	rbm4.1	99	48.843	Ictalurus_punctatus
ENSCSEG00000014359	-	94	51.752	ENSIPUG00000022937	rbm4.2	99	52.792	Ictalurus_punctatus
ENSCSEG00000014359	-	97	48.418	ENSKMAG00000006556	rbm4.1	99	47.494	Kryptolebias_marmoratus
ENSCSEG00000014359	-	100	57.421	ENSKMAG00000006528	-	100	58.881	Kryptolebias_marmoratus
ENSCSEG00000014359	-	99	48.037	ENSLBEG00000019782	rbm4.1	99	47.765	Labrus_bergylta
ENSCSEG00000014359	-	100	73.522	ENSLBEG00000019756	-	100	73.522	Labrus_bergylta
ENSCSEG00000014359	-	99	48.499	ENSMAMG00000001765	rbm4.1	99	48.832	Mastacembelus_armatus
ENSCSEG00000014359	-	100	73.008	ENSMAMG00000001760	-	100	72.751	Mastacembelus_armatus
ENSCSEG00000014359	-	97	48.086	ENSMZEG00005009205	rbm4.1	99	48.936	Maylandia_zebra
ENSCSEG00000014359	-	94	48.780	ENSMMOG00000020479	rbm4.1	99	48.364	Mola_mola
ENSCSEG00000014359	-	99	49.087	ENSMALG00000020544	rbm4.1	99	49.195	Monopterus_albus
ENSCSEG00000014359	-	100	75.128	ENSMALG00000020557	-	100	74.872	Monopterus_albus
ENSCSEG00000014359	-	97	48.086	ENSNBRG00000017755	rbm4.1	99	48.936	Neolamprologus_brichardi
ENSCSEG00000014359	-	97	48.086	ENSONIG00000015730	rbm4.1	99	48.936	Oreochromis_niloticus
ENSCSEG00000014359	-	95	48.649	ENSORLG00000012496	rbm4.1	95	48.628	Oryzias_latipes
ENSCSEG00000014359	-	95	48.649	ENSORLG00020012454	rbm4.1	95	48.628	Oryzias_latipes_hni
ENSCSEG00000014359	-	95	48.649	ENSORLG00015013678	rbm4.1	95	48.628	Oryzias_latipes_hsok
ENSCSEG00000014359	-	95	49.750	ENSOMEG00000001001	rbm4.1	95	49.380	Oryzias_melastigma
ENSCSEG00000014359	-	94	49.510	ENSPFOG00000012675	rbm4.1	94	49.751	Poecilia_formosa
ENSCSEG00000014359	-	100	61.111	ENSPFOG00000012685	-	100	61.616	Poecilia_formosa
ENSCSEG00000014359	-	94	49.510	ENSPLAG00000018572	rbm4.1	94	49.751	Poecilia_latipinna
ENSCSEG00000014359	-	94	49.510	ENSPMEG00000006290	rbm4.1	94	49.751	Poecilia_mexicana
ENSCSEG00000014359	-	100	58.015	ENSPREG00000003764	-	100	58.015	Poecilia_reticulata
ENSCSEG00000014359	-	94	49.510	ENSPREG00000003724	rbm4.1	94	49.751	Poecilia_reticulata
ENSCSEG00000014359	-	97	48.086	ENSPNYG00000004662	rbm4.1	99	48.936	Pundamilia_nyererei
ENSCSEG00000014359	-	99	51.139	ENSPNAG00000013057	rbm4.2	99	51.899	Pygocentrus_nattereri
ENSCSEG00000014359	-	99	51.691	ENSPNAG00000002539	rbm4.1	99	52.885	Pygocentrus_nattereri
ENSCSEG00000014359	-	97	48.441	ENSSMAG00000007571	rbm4.1	96	48.916	Scophthalmus_maximus
ENSCSEG00000014359	-	94	49.389	ENSSDUG00000003925	rbm4.1	99	49.299	Seriola_dumerili
ENSCSEG00000014359	-	100	78.866	ENSSDUG00000003936	-	100	78.866	Seriola_dumerili
ENSCSEG00000014359	-	100	77.062	ENSSLDG00000013157	-	100	77.835	Seriola_lalandi_dorsalis
ENSCSEG00000014359	-	94	49.389	ENSSLDG00000013147	rbm4.1	99	49.299	Seriola_lalandi_dorsalis
ENSCSEG00000014359	-	100	70.513	ENSSPAG00000019046	-	100	70.256	Stegastes_partitus
ENSCSEG00000014359	-	100	65.553	ENSTRUG00000013328	-	100	65.296	Takifugu_rubripes
ENSCSEG00000014359	-	97	47.368	ENSTRUG00000013334	rbm4.1	96	46.778	Takifugu_rubripes
ENSCSEG00000014359	-	100	65.553	ENSTNIG00000000316	-	100	65.296	Tetraodon_nigroviridis
ENSCSEG00000014359	-	94	49.510	ENSXCOG00000003731	rbm4.1	94	49.751	Xiphophorus_couchianus
ENSCSEG00000014359	-	100	60.506	ENSXMAG00000008059	-	100	61.013	Xiphophorus_maculatus
ENSCSEG00000014359	-	94	49.510	ENSXMAG00000008069	rbm4.1	94	49.751	Xiphophorus_maculatus