EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000014365 (Gene tree)
Gene ID: 103391590
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 10017 bases
Position: chr1:33648299-33658315
Accession: 103391590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000022542	zf-CCHC	PF00098.23	5.5e-08	1	1
ENSCSEP00000022546	zf-CCHC	PF00098.23	5.5e-08	1	1
ENSCSEP00000022542	RRM_5	PF13893.6	1.1e-07	1	1
ENSCSEP00000022546	RRM_5	PF13893.6	1.1e-07	1	1
ENSCSEP00000022542	RRM_1	PF00076.22	7.4e-31	1	2
ENSCSEP00000022542	RRM_1	PF00076.22	7.4e-31	2	2
ENSCSEP00000022546	RRM_1	PF00076.22	7.4e-31	1	2
ENSCSEP00000022546	RRM_1	PF00076.22	7.4e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000022832	-	4725	-	ENSCSEP00000022542	409 (aa)	-	UPI000495B21B
ENSCSET00000022836	-	4348	XM_008327903	ENSCSEP00000022546	409 (aa)	XP_008326125	UPI000495B21B

Gene Model

Click here to download ENSCSEG00000014365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000014365	rbm4.1	97	46.455	ENSCSEG00000014359	-	96	47.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014365	rbm4.1	100	75.714	ENSAPOG00000012353	rbm4.1	100	75.714	Acanthochromis_polyacanthus
ENSCSEG00000014365	rbm4.1	100	76.134	ENSACIG00000016482	rbm4.1	100	76.134	Amphilophus_citrinellus
ENSCSEG00000014365	rbm4.1	100	75.714	ENSAOCG00000010915	rbm4.1	100	75.714	Amphiprion_ocellaris
ENSCSEG00000014365	rbm4.1	100	75.714	ENSAPEG00000009494	rbm4.1	100	75.714	Amphiprion_percula
ENSCSEG00000014365	rbm4.1	100	75.059	ENSATEG00000001904	rbm4.1	100	75.059	Anabas_testudineus
ENSCSEG00000014365	rbm4.1	99	46.472	ENSACLG00000007740	-	97	46.472	Astatotilapia_calliptera
ENSCSEG00000014365	rbm4.1	100	74.224	ENSACLG00000007722	rbm4.1	100	74.224	Astatotilapia_calliptera
ENSCSEG00000014365	rbm4.1	100	57.720	ENSAMXG00000036611	rbm4.1	100	58.432	Astyanax_mexicanus
ENSCSEG00000014365	rbm4.1	100	70.000	ENSCVAG00000019349	rbm4.1	100	70.000	Cyprinodon_variegatus
ENSCSEG00000014365	rbm4.1	100	60.664	ENSDARG00000036386	rbm4.1	100	61.137	Danio_rerio
ENSCSEG00000014365	rbm4.1	100	58.314	ENSELUG00000013205	rbm4.1	100	58.879	Esox_lucius
ENSCSEG00000014365	rbm4.1	100	70.309	ENSFHEG00000022926	rbm4.1	100	70.309	Fundulus_heteroclitus
ENSCSEG00000014365	rbm4.1	100	62.118	ENSGMOG00000007464	rbm4.1	100	63.744	Gadus_morhua
ENSCSEG00000014365	rbm4.1	93	49.742	ENSGMOG00000007455	-	99	49.881	Gadus_morhua
ENSCSEG00000014365	rbm4.1	100	69.905	ENSGAFG00000019302	rbm4.1	100	69.905	Gambusia_affinis
ENSCSEG00000014365	rbm4.1	97	47.382	ENSGACG00000000821	-	96	49.377	Gasterosteus_aculeatus
ENSCSEG00000014365	rbm4.1	100	67.773	ENSGACG00000000822	rbm4.1	99	84.946	Gasterosteus_aculeatus
ENSCSEG00000014365	rbm4.1	100	74.224	ENSHBUG00000011610	rbm4.1	100	74.224	Haplochromis_burtoni
ENSCSEG00000014365	rbm4.1	93	68.123	ENSHCOG00000011403	rbm4.1	95	68.638	Hippocampus_comes
ENSCSEG00000014365	rbm4.1	100	55.734	ENSIPUG00000022931	rbm4.1	100	57.809	Ictalurus_punctatus
ENSCSEG00000014365	rbm4.1	94	49.109	ENSIPUG00000022937	rbm4.2	100	48.227	Ictalurus_punctatus
ENSCSEG00000014365	rbm4.1	100	66.824	ENSKMAG00000006556	rbm4.1	100	67.294	Kryptolebias_marmoratus
ENSCSEG00000014365	rbm4.1	100	46.618	ENSLBEG00000019756	-	90	57.692	Labrus_bergylta
ENSCSEG00000014365	rbm4.1	100	74.286	ENSLBEG00000019782	rbm4.1	100	74.286	Labrus_bergylta
ENSCSEG00000014365	rbm4.1	99	47.506	ENSMAMG00000001760	-	99	47.506	Mastacembelus_armatus
ENSCSEG00000014365	rbm4.1	100	76.485	ENSMAMG00000001765	rbm4.1	100	76.485	Mastacembelus_armatus
ENSCSEG00000014365	rbm4.1	100	74.224	ENSMZEG00005009205	rbm4.1	100	74.224	Maylandia_zebra
ENSCSEG00000014365	rbm4.1	100	74.941	ENSMMOG00000020479	rbm4.1	100	75.177	Mola_mola
ENSCSEG00000014365	rbm4.1	99	49.881	ENSMALG00000020557	-	99	49.644	Monopterus_albus
ENSCSEG00000014365	rbm4.1	100	76.960	ENSMALG00000020544	rbm4.1	100	76.960	Monopterus_albus
ENSCSEG00000014365	rbm4.1	100	74.224	ENSNBRG00000017755	rbm4.1	100	74.224	Neolamprologus_brichardi
ENSCSEG00000014365	rbm4.1	100	74.224	ENSONIG00000015730	rbm4.1	100	74.224	Oreochromis_niloticus
ENSCSEG00000014365	rbm4.1	100	68.810	ENSORLG00000012496	rbm4.1	100	68.810	Oryzias_latipes
ENSCSEG00000014365	rbm4.1	100	68.810	ENSORLG00020012454	rbm4.1	100	68.810	Oryzias_latipes_hni
ENSCSEG00000014365	rbm4.1	100	68.810	ENSORLG00015013678	rbm4.1	100	68.810	Oryzias_latipes_hsok
ENSCSEG00000014365	rbm4.1	100	69.286	ENSOMEG00000001001	rbm4.1	100	69.286	Oryzias_melastigma
ENSCSEG00000014365	rbm4.1	100	57.377	ENSPKIG00000020805	rbm4.1	100	58.080	Paramormyrops_kingsleyae
ENSCSEG00000014365	rbm4.1	100	69.668	ENSPFOG00000012675	rbm4.1	100	69.668	Poecilia_formosa
ENSCSEG00000014365	rbm4.1	99	44.706	ENSPFOG00000012685	-	97	46.229	Poecilia_formosa
ENSCSEG00000014365	rbm4.1	100	69.668	ENSPLAG00000018572	rbm4.1	100	69.668	Poecilia_latipinna
ENSCSEG00000014365	rbm4.1	100	69.668	ENSPMEG00000006290	rbm4.1	100	69.668	Poecilia_mexicana
ENSCSEG00000014365	rbm4.1	100	69.668	ENSPREG00000003724	rbm4.1	100	69.668	Poecilia_reticulata
ENSCSEG00000014365	rbm4.1	99	43.705	ENSPREG00000003764	-	95	63.731	Poecilia_reticulata
ENSCSEG00000014365	rbm4.1	100	74.224	ENSPNYG00000004662	rbm4.1	100	74.224	Pundamilia_nyererei
ENSCSEG00000014365	rbm4.1	100	48.235	ENSPNAG00000013057	rbm4.2	100	47.877	Pygocentrus_nattereri
ENSCSEG00000014365	rbm4.1	100	61.792	ENSPNAG00000002539	rbm4.1	100	62.736	Pygocentrus_nattereri
ENSCSEG00000014365	rbm4.1	100	57.541	ENSSFOG00015021996	sf1	100	57.773	Scleropages_formosus
ENSCSEG00000014365	rbm4.1	100	73.747	ENSSMAG00000007571	rbm4.1	100	73.747	Scophthalmus_maximus
ENSCSEG00000014365	rbm4.1	100	77.197	ENSSDUG00000003925	rbm4.1	100	77.197	Seriola_dumerili
ENSCSEG00000014365	rbm4.1	99	48.810	ENSSDUG00000003936	-	99	49.289	Seriola_dumerili
ENSCSEG00000014365	rbm4.1	100	77.197	ENSSLDG00000013147	rbm4.1	100	77.197	Seriola_lalandi_dorsalis
ENSCSEG00000014365	rbm4.1	99	48.571	ENSSLDG00000013157	-	99	49.057	Seriola_lalandi_dorsalis
ENSCSEG00000014365	rbm4.1	100	75.592	ENSSPAG00000019053	rbm4.1	100	76.540	Stegastes_partitus
ENSCSEG00000014365	rbm4.1	94	48.477	ENSSPAG00000019046	-	94	47.739	Stegastes_partitus
ENSCSEG00000014365	rbm4.1	97	47.277	ENSTRUG00000013328	-	98	47.242	Takifugu_rubripes
ENSCSEG00000014365	rbm4.1	98	72.236	ENSTRUG00000013334	rbm4.1	97	72.236	Takifugu_rubripes
ENSCSEG00000014365	rbm4.1	97	47.631	ENSTNIG00000000316	-	96	48.515	Tetraodon_nigroviridis
ENSCSEG00000014365	rbm4.1	76	84.422	ENSTNIG00000004821	rbm4.1	100	54.106	Tetraodon_nigroviridis
ENSCSEG00000014365	rbm4.1	100	69.668	ENSXCOG00000003731	rbm4.1	100	69.668	Xiphophorus_couchianus
ENSCSEG00000014365	rbm4.1	100	69.431	ENSXMAG00000008069	rbm4.1	100	69.431	Xiphophorus_maculatus
ENSCSEG00000014365	rbm4.1	99	45.238	ENSXMAG00000008059	-	95	69.939	Xiphophorus_maculatus