EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000014375 (Gene tree)
Gene ID: -
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 11969 bases
Position: chr1:33658360-33670328
Accession: 103391650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000022560	KH_1	PF00013.29	3.8e-06	1	1
ENSCSEP00000022560	zf-CCHC	PF00098.23	0.0005	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000022850	-	4007	XM_017036220	ENSCSEP00000022560	697 (aa)	XP_016891709	-

Gene Model

Click here to download ENSCSEG00000014375's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014375's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014375	sf1	94	90.015	ENSAPOG00000012341	sf1	97	90.045	Acanthochromis_polyacanthus
ENSCSEG00000014375	sf1	94	90.303	ENSAOCG00000010934	sf1	97	90.332	Amphiprion_ocellaris
ENSCSEG00000014375	sf1	94	90.303	ENSAPEG00000009498	sf1	97	90.332	Amphiprion_percula
ENSCSEG00000014375	sf1	65	90.153	ENSATEG00000001894	sf1	97	90.498	Anabas_testudineus
ENSCSEG00000014375	sf1	81	64.706	ENSANAG00000022607	-	75	78.505	Aotus_nancymaae
ENSCSEG00000014375	sf1	57	77.053	ENSANAG00000026664	-	93	78.079	Aotus_nancymaae
ENSCSEG00000014375	sf1	94	81.146	ENSACLG00000007633	sf1	97	86.015	Astatotilapia_calliptera
ENSCSEG00000014375	sf1	67	83.830	ENSAMXG00000003630	sf1	86	84.299	Astyanax_mexicanus
ENSCSEG00000014375	sf1	57	76.077	ENSBTAG00000001035	SF1	66	78.079	Bos_taurus
ENSCSEG00000014375	sf1	57	76.513	ENSCJAG00000002780	SF1	79	66.176	Callithrix_jacchus
ENSCSEG00000014375	sf1	57	75.837	ENSCAFG00000014239	SF1	62	78.571	Canis_familiaris
ENSCSEG00000014375	sf1	57	76.077	ENSCAFG00020014381	SF1	62	78.571	Canis_lupus_dingo
ENSCSEG00000014375	sf1	57	76.513	ENSCHIG00000025867	SF1	62	78.571	Capra_hircus
ENSCSEG00000014375	sf1	57	76.513	ENSCAPG00000010762	SF1	70	78.554	Cavia_aperea
ENSCSEG00000014375	sf1	57	70.388	ENSCCAG00000023781	-	88	68.238	Cebus_capucinus
ENSCSEG00000014375	sf1	57	76.513	ENSCCAG00000037881	SF1	93	78.079	Cebus_capucinus
ENSCSEG00000014375	sf1	53	80.105	ENSCATG00000011564	SF1	89	80.628	Cercocebus_atys
ENSCSEG00000014375	sf1	54	70.720	ENSCHOG00000006008	SF1	71	72.798	Choloepus_hoffmanni
ENSCSEG00000014375	sf1	60	80.046	ENSCPBG00000023763	SF1	72	64.928	Chrysemys_picta_bellii
ENSCSEG00000014375	sf1	58	55.582	ENSCING00000005564	-	83	55.269	Ciona_intestinalis
ENSCSEG00000014375	sf1	78	50.998	ENSCSAVG00000009055	-	60	67.315	Ciona_savignyi
ENSCSEG00000014375	sf1	53	80.105	ENSCANG00000042201	SF1	89	80.628	Colobus_angolensis_palliatus
ENSCSEG00000014375	sf1	57	76.077	ENSCGRG00001003677	Sf1	69	78.818	Cricetulus_griseus_chok1gshd
ENSCSEG00000014375	sf1	57	76.077	ENSCGRG00000001708	Sf1	72	79.052	Cricetulus_griseus_crigri
ENSCSEG00000014375	sf1	94	87.500	ENSCVAG00000001670	sf1	97	87.179	Cyprinodon_variegatus
ENSCSEG00000014375	sf1	81	82.716	ENSDARG00000008188	sf1	97	85.366	Danio_rerio
ENSCSEG00000014375	sf1	57	76.513	ENSDORG00000016334	Sf1	62	78.571	Dipodomys_ordii
ENSCSEG00000014375	sf1	57	70.531	ENSETEG00000012830	SF1	55	72.634	Echinops_telfairi
ENSCSEG00000014375	sf1	83	48.718	ENSEBUG00000012728	sf1	58	59.302	Eptatretus_burgeri
ENSCSEG00000014375	sf1	51	77.273	ENSEEUG00000001058	SF1	90	79.224	Erinaceus_europaeus
ENSCSEG00000014375	sf1	74	78.505	ENSELUG00000013225	sf1	65	82.020	Esox_lucius
ENSCSEG00000014375	sf1	57	76.513	ENSFCAG00000012231	SF1	62	78.571	Felis_catus
ENSCSEG00000014375	sf1	57	76.513	ENSFDAG00000009833	SF1	70	78.554	Fukomys_damarensis
ENSCSEG00000014375	sf1	94	84.932	ENSFHEG00000022656	sf1	97	86.536	Fundulus_heteroclitus
ENSCSEG00000014375	sf1	61	82.201	ENSGMOG00000007469	sf1	70	81.454	Gadus_morhua
ENSCSEG00000014375	sf1	86	86.469	ENSGAFG00000019284	sf1	98	86.139	Gambusia_affinis
ENSCSEG00000014375	sf1	60	79.814	ENSGAGG00000021691	SF1	71	69.364	Gopherus_agassizii
ENSCSEG00000014375	sf1	65	88.840	ENSHBUG00000011598	sf1	98	88.421	Haplochromis_burtoni
ENSCSEG00000014375	sf1	57	76.513	ENSHGLG00000009541	SF1	69	78.325	Heterocephalus_glaber_female
ENSCSEG00000014375	sf1	57	76.513	ENSHGLG00100013879	-	70	78.554	Heterocephalus_glaber_male
ENSCSEG00000014375	sf1	53	70.025	ENSHGLG00100008255	-	92	67.253	Heterocephalus_glaber_male
ENSCSEG00000014375	sf1	67	86.624	ENSHCOG00000011388	sf1	97	86.667	Hippocampus_comes
ENSCSEG00000014375	sf1	54	69.792	ENSSTOG00000024353	-	69	71.026	Ictidomys_tridecemlineatus
ENSCSEG00000014375	sf1	57	76.513	ENSSTOG00000009790	-	63	78.803	Ictidomys_tridecemlineatus
ENSCSEG00000014375	sf1	57	76.755	ENSJJAG00000011788	Sf1	62	78.818	Jaculus_jaculus
ENSCSEG00000014375	sf1	66	88.286	ENSKMAG00000005854	sf1	87	87.741	Kryptolebias_marmoratus
ENSCSEG00000014375	sf1	80	89.849	ENSLBEG00000019836	sf1	76	88.115	Labrus_bergylta
ENSCSEG00000014375	sf1	58	76.739	ENSLACG00000018493	SF1	74	75.669	Latimeria_chalumnae
ENSCSEG00000014375	sf1	65	76.842	ENSLOCG00000002130	sf1	97	71.971	Lepisosteus_oculatus
ENSCSEG00000014375	sf1	57	77.778	ENSLAFG00000007201	SF1	67	79.901	Loxodonta_africana
ENSCSEG00000014375	sf1	53	80.105	ENSMFAG00000033122	SF1	89	80.628	Macaca_fascicularis
ENSCSEG00000014375	sf1	58	75.943	ENSMMUG00000022606	SF1	98	77.724	Macaca_mulatta
ENSCSEG00000014375	sf1	58	76.359	ENSMNEG00000037901	SF1	89	80.628	Macaca_nemestrina
ENSCSEG00000014375	sf1	57	76.271	ENSMLEG00000040706	SF1	91	79.434	Mandrillus_leucophaeus
ENSCSEG00000014375	sf1	65	91.228	ENSMAMG00000001780	sf1	97	91.390	Mastacembelus_armatus
ENSCSEG00000014375	sf1	65	88.840	ENSMZEG00005009196	sf1	98	88.421	Maylandia_zebra
ENSCSEG00000014375	sf1	57	76.077	ENSMAUG00000014064	Sf1	69	78.818	Mesocricetus_auratus
ENSCSEG00000014375	sf1	57	76.513	ENSMICG00000001202	SF1	93	78.133	Microcebus_murinus
ENSCSEG00000014375	sf1	57	76.755	ENSMOCG00000022038	Sf1	69	78.818	Microtus_ochrogaster
ENSCSEG00000014375	sf1	65	87.033	ENSMMOG00000020474	sf1	71	86.128	Mola_mola
ENSCSEG00000014375	sf1	57	76.850	ENSMODG00000029407	SF1	86	78.571	Monodelphis_domestica
ENSCSEG00000014375	sf1	65	85.430	ENSMALG00000020521	sf1	77	84.823	Monopterus_albus
ENSCSEG00000014375	sf1	57	76.077	MGP_CAROLIEiJ_G0022607	Sf1	99	93.609	Mus_caroli
ENSCSEG00000014375	sf1	57	76.077	ENSMUSG00000024949	Sf1	99	93.609	Mus_musculus
ENSCSEG00000014375	sf1	57	76.077	MGP_PahariEiJ_G0014101	Sf1	99	93.609	Mus_pahari
ENSCSEG00000014375	sf1	57	76.077	MGP_SPRETEiJ_G0023518	Sf1	99	93.609	Mus_spretus
ENSCSEG00000014375	sf1	57	76.077	ENSMPUG00000012684	SF1	62	79.064	Mustela_putorius_furo
ENSCSEG00000014375	sf1	57	76.316	ENSMLUG00000015217	-	62	79.064	Myotis_lucifugus
ENSCSEG00000014375	sf1	60	73.077	ENSMLUG00000029800	-	68	75.123	Myotis_lucifugus
ENSCSEG00000014375	sf1	57	76.755	ENSNGAG00000005550	Sf1	69	78.571	Nannospalax_galili
ENSCSEG00000014375	sf1	53	80.105	ENSNLEG00000005236	-	89	80.628	Nomascus_leucogenys
ENSCSEG00000014375	sf1	56	77.073	ENSMEUG00000013424	SF1	74	79.146	Notamacropus_eugenii
ENSCSEG00000014375	sf1	65	88.621	ENSONIG00000015728	sf1	98	88.271	Oreochromis_niloticus
ENSCSEG00000014375	sf1	57	76.271	ENSOCUG00000026486	SF1	63	78.571	Oryctolagus_cuniculus
ENSCSEG00000014375	sf1	67	88.197	ENSORLG00000011853	sf1	70	87.448	Oryzias_latipes
ENSCSEG00000014375	sf1	67	87.768	ENSORLG00020011834	sf1	70	87.029	Oryzias_latipes_hni
ENSCSEG00000014375	sf1	66	87.965	ENSORLG00015012855	sf1	70	86.694	Oryzias_latipes_hsok
ENSCSEG00000014375	sf1	66	89.497	ENSOMEG00000005210	sf1	97	88.164	Oryzias_melastigma
ENSCSEG00000014375	sf1	57	75.837	ENSOGAG00000016196	SF1	62	78.571	Otolemur_garnettii
ENSCSEG00000014375	sf1	57	76.513	ENSOARG00000009166	SF1	69	78.325	Ovis_aries
ENSCSEG00000014375	sf1	57	77.427	ENSPPAG00000002799	-	95	78.325	Pan_paniscus
ENSCSEG00000014375	sf1	57	76.513	ENSPPRG00000013566	SF1	62	79.639	Panthera_pardus
ENSCSEG00000014375	sf1	57	76.513	ENSPTIG00000016141	SF1	71	78.571	Panthera_tigris_altaica
ENSCSEG00000014375	sf1	58	76.526	ENSPTRG00000003846	SF1	92	78.325	Pan_troglodytes
ENSCSEG00000014375	sf1	57	76.513	ENSPANG00000020754	SF1	89	80.628	Papio_anubis
ENSCSEG00000014375	sf1	57	76.077	ENSPEMG00000010463	Sf1	69	78.818	Peromyscus_maniculatus_bairdii
ENSCSEG00000014375	sf1	58	75.822	ENSPCIG00000018173	SF1	64	79.557	Phascolarctos_cinereus
ENSCSEG00000014375	sf1	94	87.860	ENSPFOG00000013683	sf1	97	87.595	Poecilia_formosa
ENSCSEG00000014375	sf1	87	87.928	ENSPLAG00000018076	sf1	93	87.642	Poecilia_latipinna
ENSCSEG00000014375	sf1	94	87.860	ENSPMEG00000005726	sf1	97	87.595	Poecilia_mexicana
ENSCSEG00000014375	sf1	94	87.860	ENSPREG00000004155	sf1	97	87.595	Poecilia_reticulata
ENSCSEG00000014375	sf1	57	76.513	ENSPPYG00000003098	-	75	78.325	Pongo_abelii
ENSCSEG00000014375	sf1	58	75.529	ENSPCAG00000013631	SF1	79	65.741	Procavia_capensis
ENSCSEG00000014375	sf1	57	76.271	ENSPCOG00000027546	SF1	93	78.133	Propithecus_coquereli
ENSCSEG00000014375	sf1	65	88.235	ENSPNYG00000004673	sf1	98	88.421	Pundamilia_nyererei
ENSCSEG00000014375	sf1	65	83.370	ENSPNAG00000013072	sf1	97	83.537	Pygocentrus_nattereri
ENSCSEG00000014375	sf1	57	76.077	ENSRNOG00000021085	Sf1	62	78.571	Rattus_norvegicus
ENSCSEG00000014375	sf1	57	76.513	ENSRBIG00000042818	SF1	89	80.366	Rhinopithecus_bieti
ENSCSEG00000014375	sf1	57	76.513	ENSRROG00000045655	SF1	92	79.434	Rhinopithecus_roxellana
ENSCSEG00000014375	sf1	78	64.164	ENSSBOG00000022267	-	92	68.254	Saimiri_boliviensis_boliviensis
ENSCSEG00000014375	sf1	56	79.699	ENSSHAG00000006841	SF1	73	81.000	Sarcophilus_harrisii
ENSCSEG00000014375	sf1	68	79.002	ENSSFOG00015021978	sf1	70	78.351	Scleropages_formosus
ENSCSEG00000014375	sf1	81	87.435	ENSSMAG00000007549	sf1	76	87.071	Scophthalmus_maximus
ENSCSEG00000014375	sf1	65	91.685	ENSSDUG00000003903	sf1	98	91.250	Seriola_dumerili
ENSCSEG00000014375	sf1	57	72.155	ENSSARG00000008180	SF1	76	74.065	Sorex_araneus
ENSCSEG00000014375	sf1	57	78.140	ENSSPUG00000012907	SF1	65	81.170	Sphenodon_punctatus
ENSCSEG00000014375	sf1	94	91.364	ENSSPAG00000019060	sf1	97	91.239	Stegastes_partitus
ENSCSEG00000014375	sf1	57	76.316	ENSSSCG00000013021	SF1	62	78.818	Sus_scrofa
ENSCSEG00000014375	sf1	70	71.293	ENSTNIG00000004820	sf1	77	74.818	Tetraodon_nigroviridis
ENSCSEG00000014375	sf1	59	70.309	ENSTBEG00000013133	SF1	66	64.463	Tupaia_belangeri
ENSCSEG00000014375	sf1	57	71.053	ENSTTRG00000008857	SF1	84	63.793	Tursiops_truncatus
ENSCSEG00000014375	sf1	57	76.513	ENSUMAG00000007268	SF1	76	78.079	Ursus_maritimus
ENSCSEG00000014375	sf1	82	71.404	ENSXETG00000008434	sf1	56	89.264	Xenopus_tropicalis
ENSCSEG00000014375	sf1	52	93.151	ENSXCOG00000003704	sf1	74	90.281	Xiphophorus_couchianus
ENSCSEG00000014375	sf1	94	88.012	ENSXMAG00000007822	sf1	97	87.746	Xiphophorus_maculatus