EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000014416 (Gene tree)
Gene ID: 103378286
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein ORAB-1-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6316 bases
Position: chr4:14588473-14594788
Accession: 103378286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000022641	MMR_HSR1	PF01926.23	4.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000022931	-	5234	XM_008309443	ENSCSEP00000022641	213 (aa)	XP_008307665	UPI00049548E6

Gene Model

Click here to download ENSCSEG00000014416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014416's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000014416	zgc:171927	76	39.130	ENSCSEG00000003122	rab6ba	77	39.130
ENSCSEG00000014416	zgc:171927	76	32.515	ENSCSEG00000003537	rhebl1	88	32.515
ENSCSEG00000014416	zgc:171927	79	40.884	ENSCSEG00000020348	rab33ba	76	40.884
ENSCSEG00000014416	zgc:171927	55	31.356	ENSCSEG00000018609	arl8a	65	31.356
ENSCSEG00000014416	zgc:171927	55	30.252	ENSCSEG00000007479	ARL4A	59	30.252
ENSCSEG00000014416	zgc:171927	55	30.252	ENSCSEG00000014890	arl4aa	60	30.252
ENSCSEG00000014416	zgc:171927	85	40.000	ENSCSEG00000016284	rab33a	61	41.860
ENSCSEG00000014416	zgc:171927	76	37.952	ENSCSEG00000014467	rab9b	75	37.952
ENSCSEG00000014416	zgc:171927	56	35.000	ENSCSEG00000011160	rab20	50	35.000
ENSCSEG00000014416	zgc:171927	81	46.512	ENSCSEG00000011982	rab25b	93	41.148
ENSCSEG00000014416	zgc:171927	54	30.252	ENSCSEG00000010194	-	58	30.252
ENSCSEG00000014416	zgc:171927	98	40.385	ENSCSEG00000016498	rab14	96	40.385
ENSCSEG00000014416	zgc:171927	73	39.623	ENSCSEG00000010116	rab9a	75	39.623
ENSCSEG00000014416	zgc:171927	79	46.667	ENSCSEG00000006243	zgc:101559	77	46.667
ENSCSEG00000014416	zgc:171927	98	45.283	ENSCSEG00000010402	-	95	45.283
ENSCSEG00000014416	zgc:171927	80	45.930	ENSCSEG00000016933	rab12	71	45.930
ENSCSEG00000014416	zgc:171927	79	43.275	ENSCSEG00000017861	-	80	43.275
ENSCSEG00000014416	zgc:171927	100	72.300	ENSCSEG00000018732	rab1ba	100	72.300
ENSCSEG00000014416	zgc:171927	76	49.383	ENSCSEG00000016803	rab18b	82	49.383
ENSCSEG00000014416	zgc:171927	77	38.462	ENSCSEG00000002970	RAB7A	76	38.462
ENSCSEG00000014416	zgc:171927	80	52.632	ENSCSEG00000007383	rab11a	80	52.632
ENSCSEG00000014416	zgc:171927	74	37.037	ENSCSEG00000018133	rab34b	64	37.037
ENSCSEG00000014416	zgc:171927	82	44.444	ENSCSEG00000019183	si:dkey-34d22.5	81	44.444
ENSCSEG00000014416	zgc:171927	79	43.860	ENSCSEG00000019722	RAB39B	80	43.860
ENSCSEG00000014416	zgc:171927	76	65.432	ENSCSEG00000013400	rab35b	80	65.432
ENSCSEG00000014416	zgc:171927	98	41.627	ENSCSEG00000017026	rab25a	96	41.627
ENSCSEG00000014416	zgc:171927	86	40.104	ENSCSEG00000017024	rab5c	87	40.104
ENSCSEG00000014416	zgc:171927	84	47.486	ENSCSEG00000000205	RAB15	86	47.486
ENSCSEG00000014416	zgc:171927	78	33.929	ENSCSEG00000018987	si:ch73-116o1.2	80	33.929
ENSCSEG00000014416	zgc:171927	77	38.462	ENSCSEG00000005357	-	82	38.462
ENSCSEG00000014416	zgc:171927	57	32.331	ENSCSEG00000013577	arfrp1	65	32.331
ENSCSEG00000014416	zgc:171927	89	53.608	ENSCSEG00000002358	rab13	97	53.608
ENSCSEG00000014416	zgc:171927	88	31.606	ENSCSEG00000015770	si:cabz01085950.1	92	31.606
ENSCSEG00000014416	zgc:171927	99	45.498	ENSCSEG00000007239	-	96	45.498
ENSCSEG00000014416	zgc:171927	76	33.129	ENSCSEG00000016611	rheb	88	33.129
ENSCSEG00000014416	zgc:171927	79	49.704	ENSCSEG00000003768	rab15	72	49.704
ENSCSEG00000014416	zgc:171927	76	38.509	ENSCSEG00000004941	rab41	76	38.509
ENSCSEG00000014416	zgc:171927	99	46.226	ENSCSEG00000012149	rab11bb	96	46.226
ENSCSEG00000014416	zgc:171927	55	30.328	ENSCSEG00000012307	-	59	30.328
ENSCSEG00000014416	zgc:171927	81	42.857	ENSCSEG00000010582	rab42a	80	42.857
ENSCSEG00000014416	zgc:171927	76	37.888	ENSCSEG00000016556	rab6bb	77	37.888
ENSCSEG00000014416	zgc:171927	81	50.289	ENSCSEG00000007121	rab11ba	67	50.289
ENSCSEG00000014416	zgc:171927	100	71.362	ENSCSEG00000020977	-	99	71.362
ENSCSEG00000014416	zgc:171927	96	35.211	ENSCSEG00000012961	rab34a	79	35.211
ENSCSEG00000014416	zgc:171927	54	71.304	ENSCSEG00000009988	si:dkey-16l2.16	87	71.304
ENSCSEG00000014416	zgc:171927	71	31.579	ENSCSEG00000009987	rras2	81	32.317
ENSCSEG00000014416	zgc:171927	69	43.791	ENSCSEG00000014479	-	63	44.079
ENSCSEG00000014416	zgc:171927	85	39.011	ENSCSEG00000005737	kras	92	39.011
ENSCSEG00000014416	zgc:171927	85	48.333	ENSCSEG00000017211	rab2a	99	45.498
ENSCSEG00000014416	zgc:171927	76	36.196	ENSCSEG00000011820	rras	82	36.196
ENSCSEG00000014416	zgc:171927	99	45.498	ENSCSEG00000011996	rab11al	96	45.498
ENSCSEG00000014416	zgc:171927	77	37.805	ENSCSEG00000007927	hrasb	86	37.805
ENSCSEG00000014416	zgc:171927	73	35.220	ENSCSEG00000005479	rabl2	68	35.220
ENSCSEG00000014416	zgc:171927	76	38.509	ENSCSEG00000019797	rab22a	83	38.509
ENSCSEG00000014416	zgc:171927	99	45.972	ENSCSEG00000007292	rab30	97	45.972
ENSCSEG00000014416	zgc:171927	76	51.235	ENSCSEG00000011816	rab18a	79	51.235
ENSCSEG00000014416	zgc:171927	81	36.000	ENSCSEG00000010565	rab23	87	35.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014416	zgc:171927	100	91.121	ENSAPOG00000004980	-	100	91.121	Acanthochromis_polyacanthus
ENSCSEG00000014416	zgc:171927	100	91.589	ENSACIG00000009006	zgc:171927	100	91.589	Amphilophus_citrinellus
ENSCSEG00000014416	zgc:171927	100	89.252	ENSAOCG00000024149	-	100	89.252	Amphiprion_ocellaris
ENSCSEG00000014416	zgc:171927	71	87.097	ENSAOCG00000013808	-	93	95.868	Amphiprion_ocellaris
ENSCSEG00000014416	zgc:171927	100	89.720	ENSAPEG00000022171	zgc:171927	99	89.720	Amphiprion_percula
ENSCSEG00000014416	zgc:171927	100	90.654	ENSATEG00000003430	zgc:171927	100	90.654	Anabas_testudineus
ENSCSEG00000014416	zgc:171927	100	90.187	ENSACLG00000013734	-	100	90.187	Astatotilapia_calliptera
ENSCSEG00000014416	zgc:171927	100	78.605	ENSAMXG00000039486	zgc:171927	100	78.605	Astyanax_mexicanus
ENSCSEG00000014416	zgc:171927	100	89.252	ENSCVAG00000009222	zgc:171927	100	89.252	Cyprinodon_variegatus
ENSCSEG00000014416	zgc:171927	100	78.140	ENSDARG00000033056	zgc:171927	100	78.140	Danio_rerio
ENSCSEG00000014416	zgc:171927	95	81.188	ENSELUG00000011680	zgc:171927	100	77.778	Esox_lucius
ENSCSEG00000014416	zgc:171927	100	91.121	ENSFHEG00000022176	zgc:171927	100	91.121	Fundulus_heteroclitus
ENSCSEG00000014416	zgc:171927	98	76.303	ENSGMOG00000004979	-	97	76.303	Gadus_morhua
ENSCSEG00000014416	zgc:171927	98	89.474	ENSGAFG00000015702	zgc:171927	84	89.474	Gambusia_affinis
ENSCSEG00000014416	zgc:171927	100	89.252	ENSGACG00000013401	zgc:171927	99	89.252	Gasterosteus_aculeatus
ENSCSEG00000014416	zgc:171927	100	90.187	ENSHBUG00000002397	-	100	90.187	Haplochromis_burtoni
ENSCSEG00000014416	zgc:171927	100	89.252	ENSKMAG00000009856	zgc:171927	100	89.252	Kryptolebias_marmoratus
ENSCSEG00000014416	zgc:171927	100	87.850	ENSLBEG00000005791	-	100	87.850	Labrus_bergylta
ENSCSEG00000014416	zgc:171927	98	88.038	ENSLBEG00000027226	-	89	88.038	Labrus_bergylta
ENSCSEG00000014416	zgc:171927	98	70.952	ENSLOCG00000014692	zgc:171927	96	70.952	Lepisosteus_oculatus
ENSCSEG00000014416	zgc:171927	100	87.383	ENSMAMG00000020135	zgc:171927	100	87.383	Mastacembelus_armatus
ENSCSEG00000014416	zgc:171927	100	90.187	ENSMZEG00005024685	-	100	90.187	Maylandia_zebra
ENSCSEG00000014416	zgc:171927	100	87.383	ENSMMOG00000009833	-	100	87.383	Mola_mola
ENSCSEG00000014416	zgc:171927	100	87.850	ENSMALG00000021129	zgc:171927	100	87.850	Monopterus_albus
ENSCSEG00000014416	zgc:171927	100	89.720	ENSNBRG00000006202	zgc:171927	100	89.720	Neolamprologus_brichardi
ENSCSEG00000014416	zgc:171927	100	88.318	ENSORLG00000000602	zgc:171927	100	88.318	Oryzias_latipes
ENSCSEG00000014416	zgc:171927	100	88.318	ENSORLG00020021071	zgc:171927	100	88.318	Oryzias_latipes_hni
ENSCSEG00000014416	zgc:171927	100	88.318	ENSORLG00015010098	zgc:171927	100	88.318	Oryzias_latipes_hsok
ENSCSEG00000014416	zgc:171927	100	88.318	ENSOMEG00000020594	zgc:171927	100	88.318	Oryzias_melastigma
ENSCSEG00000014416	zgc:171927	100	89.252	ENSPFOG00000013810	zgc:171927	99	89.252	Poecilia_formosa
ENSCSEG00000014416	zgc:171927	100	88.318	ENSPLAG00000005869	zgc:171927	100	88.318	Poecilia_latipinna
ENSCSEG00000014416	zgc:171927	100	89.252	ENSPMEG00000022350	zgc:171927	100	89.252	Poecilia_mexicana
ENSCSEG00000014416	zgc:171927	100	89.720	ENSPREG00000017517	zgc:171927	100	89.720	Poecilia_reticulata
ENSCSEG00000014416	zgc:171927	100	90.187	ENSPNYG00000007520	-	100	90.187	Pundamilia_nyererei
ENSCSEG00000014416	zgc:171927	100	78.605	ENSPNAG00000029574	zgc:171927	100	78.605	Pygocentrus_nattereri
ENSCSEG00000014416	zgc:171927	100	75.814	ENSSFOG00015005464	zgc:171927	99	75.814	Scleropages_formosus
ENSCSEG00000014416	zgc:171927	100	86.916	ENSSMAG00000004416	-	100	86.916	Scophthalmus_maximus
ENSCSEG00000014416	zgc:171927	100	91.589	ENSSDUG00000004445	zgc:171927	100	91.589	Seriola_dumerili
ENSCSEG00000014416	zgc:171927	100	91.589	ENSSLDG00000018024	zgc:171927	100	91.589	Seriola_lalandi_dorsalis
ENSCSEG00000014416	zgc:171927	100	90.654	ENSSPAG00000013533	zgc:171927	100	90.654	Stegastes_partitus
ENSCSEG00000014416	zgc:171927	100	89.720	ENSXCOG00000010695	zgc:171927	100	89.720	Xiphophorus_couchianus
ENSCSEG00000014416	zgc:171927	100	90.187	ENSXMAG00000004683	zgc:171927	100	90.187	Xiphophorus_maculatus