EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000014419 (Gene tree)
Gene ID: 103397224
Gene Symbol: -
Alias: -
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 16623 bases
Position: chrW:12219022-12235644
Accession: 103397224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000022659	ResIII	PF04851.15	6.1e-08	1	1
ENSCSEP00000022643	ResIII	PF04851.15	9.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000022949	-	3528	-	ENSCSEP00000022659	1006 (aa)	-	-
ENSCSET00000022933	-	3597	XM_017042706	ENSCSEP00000022643	1046 (aa)	XP_016898195	UPI0007DCB6E1

Gene Model

Click here to download ENSCSEG00000014419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014419's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000014419	-	100	88.418	ENSCSEG00000017903	smarcad1a	100	88.701
ENSCSEG00000014419	-	52	32.075	ENSCSEG00000009723	-	74	35.510
ENSCSEG00000014419	-	51	34.381	ENSCSEG00000016985	hells	69	34.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014419	-	95	59.554	ENSG00000163104	SMARCAD1	100	65.101	Homo_sapiens
ENSCSEG00000014419	-	99	73.498	ENSAPOG00000011446	smarcad1a	100	71.600	Acanthochromis_polyacanthus
ENSCSEG00000014419	-	91	58.904	ENSAMEG00000005844	SMARCAD1	96	60.545	Ailuropoda_melanoleuca
ENSCSEG00000014419	-	69	83.333	ENSACIG00000018326	smarcad1a	90	96.000	Amphilophus_citrinellus
ENSCSEG00000014419	-	99	73.622	ENSAOCG00000019762	smarcad1a	100	72.643	Amphiprion_ocellaris
ENSCSEG00000014419	-	99	74.016	ENSAPEG00000003889	smarcad1a	100	72.736	Amphiprion_percula
ENSCSEG00000014419	-	98	72.098	ENSATEG00000015608	smarcad1a	99	72.451	Anabas_testudineus
ENSCSEG00000014419	-	83	65.217	ENSAPLG00000004630	SMARCAD1	99	62.059	Anas_platyrhynchos
ENSCSEG00000014419	-	79	64.752	ENSACAG00000013554	SMARCAD1	93	64.752	Anolis_carolinensis
ENSCSEG00000014419	-	99	57.219	ENSANAG00000020488	SMARCAD1	100	60.458	Aotus_nancymaae
ENSCSEG00000014419	-	100	69.686	ENSACLG00000017063	smarcad1a	100	70.381	Astatotilapia_calliptera
ENSCSEG00000014419	-	77	67.525	ENSAMXG00000019130	smarcad1b	83	67.954	Astyanax_mexicanus
ENSCSEG00000014419	-	70	67.327	ENSAMXG00000015470	smarcad1a	99	67.044	Astyanax_mexicanus
ENSCSEG00000014419	-	91	58.743	ENSBTAG00000017061	SMARCAD1	96	60.372	Bos_taurus
ENSCSEG00000014419	-	93	57.371	ENSCJAG00000006778	SMARCAD1	84	60.632	Callithrix_jacchus
ENSCSEG00000014419	-	91	58.904	ENSCAFG00000010026	SMARCAD1	96	60.545	Canis_familiaris
ENSCSEG00000014419	-	85	58.904	ENSCAFG00020003994	SMARCAD1	97	60.545	Canis_lupus_dingo
ENSCSEG00000014419	-	96	58.767	ENSCHIG00000012905	SMARCAD1	100	60.402	Capra_hircus
ENSCSEG00000014419	-	94	57.503	ENSTSYG00000002706	SMARCAD1	96	60.632	Carlito_syrichta
ENSCSEG00000014419	-	96	53.824	ENSCAPG00000016744	SMARCAD1	94	55.060	Cavia_aperea
ENSCSEG00000014419	-	94	57.371	ENSCPOG00000011398	SMARCAD1	96	60.632	Cavia_porcellus
ENSCSEG00000014419	-	99	57.503	ENSCCAG00000022264	SMARCAD1	100	65.268	Cebus_capucinus
ENSCSEG00000014419	-	96	59.041	ENSCATG00000035663	SMARCAD1	100	61.526	Cercocebus_atys
ENSCSEG00000014419	-	92	56.567	ENSCSAG00000004186	SMARCAD1	100	60.776	Chlorocebus_sabaeus
ENSCSEG00000014419	-	95	51.806	ENSCPBG00000013203	SMARCAD1	81	61.816	Chrysemys_picta_bellii
ENSCSEG00000014419	-	66	49.701	ENSCING00000001688	-	99	49.701	Ciona_intestinalis
ENSCSEG00000014419	-	96	59.041	ENSCANG00000003556	SMARCAD1	100	65.101	Colobus_angolensis_palliatus
ENSCSEG00000014419	-	96	58.953	ENSCGRG00001015056	Smarcad1	100	59.580	Cricetulus_griseus_chok1gshd
ENSCSEG00000014419	-	96	58.953	ENSCGRG00000014087	Smarcad1	100	59.580	Cricetulus_griseus_crigri
ENSCSEG00000014419	-	100	55.902	ENSDARG00000014041	smarcad1a	100	56.711	Danio_rerio
ENSCSEG00000014419	-	74	71.275	ENSDARG00000073721	smarcad1b	78	69.457	Danio_rerio
ENSCSEG00000014419	-	95	56.437	ENSDNOG00000000806	-	96	60.545	Dasypus_novemcinctus
ENSCSEG00000014419	-	100	46.425	ENSDORG00000012331	Smarcad1	98	59.467	Dipodomys_ordii
ENSCSEG00000014419	-	64	46.049	FBgn0032157	Etl1	78	45.783	Drosophila_melanogaster
ENSCSEG00000014419	-	65	46.818	ENSEBUG00000003969	smarcad1a	95	47.200	Eptatretus_burgeri
ENSCSEG00000014419	-	91	58.904	ENSEASG00005012382	SMARCAD1	96	60.545	Equus_asinus_asinus
ENSCSEG00000014419	-	91	58.904	ENSECAG00000011562	SMARCAD1	96	60.545	Equus_caballus
ENSCSEG00000014419	-	100	62.114	ENSELUG00000018535	smarcad1a	100	62.804	Esox_lucius
ENSCSEG00000014419	-	74	69.313	ENSELUG00000019154	smarcad1b	75	69.313	Esox_lucius
ENSCSEG00000014419	-	94	57.636	ENSFCAG00000003958	SMARCAD1	100	65.268	Felis_catus
ENSCSEG00000014419	-	83	62.029	ENSFALG00000006089	SMARCAD1	81	61.449	Ficedula_albicollis
ENSCSEG00000014419	-	91	59.178	ENSFDAG00000017027	SMARCAD1	96	60.920	Fukomys_damarensis
ENSCSEG00000014419	-	100	64.977	ENSFHEG00000012778	smarcad1a	100	64.563	Fundulus_heteroclitus
ENSCSEG00000014419	-	88	74.560	ENSGMOG00000018995	smarcad1a	97	76.869	Gadus_morhua
ENSCSEG00000014419	-	81	58.824	ENSGALG00000037339	SMARCAD1	94	59.801	Gallus_gallus
ENSCSEG00000014419	-	100	64.405	ENSGAFG00000013498	smarcad1a	100	64.247	Gambusia_affinis
ENSCSEG00000014419	-	88	80.083	ENSGACG00000007327	smarcad1a	99	81.382	Gasterosteus_aculeatus
ENSCSEG00000014419	-	91	58.553	ENSGAGG00000008582	SMARCAD1	81	61.960	Gopherus_agassizii
ENSCSEG00000014419	-	96	58.904	ENSGGOG00000023001	SMARCAD1	100	60.632	Gorilla_gorilla
ENSCSEG00000014419	-	100	69.593	ENSHBUG00000011042	smarcad1a	100	70.288	Haplochromis_burtoni
ENSCSEG00000014419	-	91	59.178	ENSHGLG00000005070	SMARCAD1	96	60.920	Heterocephalus_glaber_female
ENSCSEG00000014419	-	91	59.178	ENSHGLG00100006812	SMARCAD1	96	60.920	Heterocephalus_glaber_male
ENSCSEG00000014419	-	99	61.596	ENSHCOG00000007848	smarcad1a	100	60.647	Hippocampus_comes
ENSCSEG00000014419	-	70	66.667	ENSIPUG00000000242	smarcad1a	96	58.393	Ictalurus_punctatus
ENSCSEG00000014419	-	77	70.353	ENSIPUG00000022817	smarcad1b	81	68.328	Ictalurus_punctatus
ENSCSEG00000014419	-	97	58.030	ENSSTOG00000001227	SMARCAD1	100	60.345	Ictidomys_tridecemlineatus
ENSCSEG00000014419	-	91	58.904	ENSJJAG00000022342	Smarcad1	94	62.054	Jaculus_jaculus
ENSCSEG00000014419	-	98	68.204	ENSKMAG00000021351	smarcad1a	98	68.644	Kryptolebias_marmoratus
ENSCSEG00000014419	-	100	70.561	ENSLBEG00000008088	smarcad1a	99	70.709	Labrus_bergylta
ENSCSEG00000014419	-	86	70.060	ENSLOCG00000012909	smarcad1a	100	54.256	Lepisosteus_oculatus
ENSCSEG00000014419	-	90	58.207	ENSLAFG00000000040	SMARCAD1	84	59.626	Loxodonta_africana
ENSCSEG00000014419	-	96	59.041	ENSMFAG00000042606	SMARCAD1	100	60.776	Macaca_fascicularis
ENSCSEG00000014419	-	93	57.503	ENSMMUG00000022242	SMARCAD1	97	60.776	Macaca_mulatta
ENSCSEG00000014419	-	96	59.041	ENSMNEG00000038117	SMARCAD1	100	65.101	Macaca_nemestrina
ENSCSEG00000014419	-	96	59.041	ENSMLEG00000038333	SMARCAD1	100	65.101	Mandrillus_leucophaeus
ENSCSEG00000014419	-	100	71.693	ENSMAMG00000000933	smarcad1a	100	72.233	Mastacembelus_armatus
ENSCSEG00000014419	-	100	68.299	ENSMZEG00005005203	smarcad1a	100	68.988	Maylandia_zebra
ENSCSEG00000014419	-	81	65.719	ENSMGAG00000005577	SMARCAD1	84	65.719	Meleagris_gallopavo
ENSCSEG00000014419	-	97	59.229	ENSMAUG00000008417	Smarcad1	100	59.860	Mesocricetus_auratus
ENSCSEG00000014419	-	95	57.616	ENSMICG00000009746	SMARCAD1	84	60.458	Microcebus_murinus
ENSCSEG00000014419	-	96	58.540	ENSMOCG00000017142	Smarcad1	100	60.201	Microtus_ochrogaster
ENSCSEG00000014419	-	74	82.603	ENSMMOG00000000275	smarcad1a	99	81.642	Mola_mola
ENSCSEG00000014419	-	99	49.211	ENSMODG00000019268	SMARCAD1	85	62.500	Monodelphis_domestica
ENSCSEG00000014419	-	93	50.530	MGP_CAROLIEiJ_G0028458	-	67	54.121	Mus_caroli
ENSCSEG00000014419	-	85	62.054	ENSMUSG00000029920	Smarcad1	100	62.054	Mus_musculus
ENSCSEG00000014419	-	91	62.054	MGP_PahariEiJ_G0022198	Smarcad1	100	62.054	Mus_pahari
ENSCSEG00000014419	-	85	62.054	MGP_SPRETEiJ_G0029462	Smarcad1	100	62.054	Mus_spretus
ENSCSEG00000014419	-	91	58.767	ENSMPUG00000002111	SMARCAD1	96	60.402	Mustela_putorius_furo
ENSCSEG00000014419	-	95	50.520	ENSMLUG00000000425	SMARCAD1	100	46.667	Myotis_lucifugus
ENSCSEG00000014419	-	100	46.691	ENSNGAG00000000810	Smarcad1	94	62.202	Nannospalax_galili
ENSCSEG00000014419	-	78	75.696	ENSNBRG00000012749	smarcad1a	98	74.178	Neolamprologus_brichardi
ENSCSEG00000014419	-	96	58.904	ENSNLEG00000014225	SMARCAD1	100	65.101	Nomascus_leucogenys
ENSCSEG00000014419	-	97	50.100	ENSODEG00000004334	SMARCAD1	96	60.920	Octodon_degus
ENSCSEG00000014419	-	83	82.215	ENSONIG00000015059	smarcad1a	100	78.229	Oreochromis_niloticus
ENSCSEG00000014419	-	73	65.426	ENSOANG00000013764	SMARCAD1	92	63.556	Ornithorhynchus_anatinus
ENSCSEG00000014419	-	89	60.345	ENSOCUG00000017283	SMARCAD1	96	60.345	Oryctolagus_cuniculus
ENSCSEG00000014419	-	99	65.483	ENSORLG00000004869	smarcad1a	100	64.146	Oryzias_latipes
ENSCSEG00000014419	-	100	64.531	ENSORLG00020020569	smarcad1a	100	64.239	Oryzias_latipes_hni
ENSCSEG00000014419	-	100	64.717	ENSORLG00015009045	smarcad1a	100	64.706	Oryzias_latipes_hsok
ENSCSEG00000014419	-	99	67.697	ENSOMEG00000023032	smarcad1a	100	66.353	Oryzias_melastigma
ENSCSEG00000014419	-	94	56.954	ENSOGAG00000011444	SMARCAD1	96	60.172	Otolemur_garnettii
ENSCSEG00000014419	-	96	58.767	ENSOARG00000017851	SMARCAD1	100	60.402	Ovis_aries
ENSCSEG00000014419	-	96	58.904	ENSPPAG00000035715	SMARCAD1	100	60.632	Pan_paniscus
ENSCSEG00000014419	-	94	57.636	ENSPPRG00000024756	SMARCAD1	100	65.268	Panthera_pardus
ENSCSEG00000014419	-	94	57.616	ENSPTIG00000017868	SMARCAD1	96	60.372	Panthera_tigris_altaica
ENSCSEG00000014419	-	96	58.904	ENSPTRG00000023126	SMARCAD1	100	65.101	Pan_troglodytes
ENSCSEG00000014419	-	96	57.844	ENSPANG00000019757	SMARCAD1	99	60.890	Papio_anubis
ENSCSEG00000014419	-	95	51.875	ENSPSIG00000010255	SMARCAD1	99	62.536	Pelodiscus_sinensis
ENSCSEG00000014419	-	63	75.587	ENSPMGG00000010735	smarcad1a	99	72.159	Periophthalmus_magnuspinnatus
ENSCSEG00000014419	-	100	41.583	ENSPEMG00000001854	Smarcad1	99	52.381	Peromyscus_maniculatus_bairdii
ENSCSEG00000014419	-	91	52.103	ENSPMAG00000003516	smarcad1a	93	54.801	Petromyzon_marinus
ENSCSEG00000014419	-	82	58.191	ENSPCIG00000008137	SMARCAD1	90	63.095	Phascolarctos_cinereus
ENSCSEG00000014419	-	100	66.108	ENSPFOG00000019116	smarcad1a	100	66.068	Poecilia_formosa
ENSCSEG00000014419	-	100	65.829	ENSPLAG00000000108	smarcad1a	100	65.978	Poecilia_latipinna
ENSCSEG00000014419	-	100	66.108	ENSPMEG00000009155	smarcad1a	100	66.068	Poecilia_mexicana
ENSCSEG00000014419	-	100	68.533	ENSPREG00000018185	smarcad1a	100	68.494	Poecilia_reticulata
ENSCSEG00000014419	-	96	58.607	ENSPPYG00000014935	SMARCAD1	100	60.029	Pongo_abelii
ENSCSEG00000014419	-	61	55.859	ENSPCOG00000020478	SMARCAD1	69	58.176	Propithecus_coquereli
ENSCSEG00000014419	-	96	57.692	ENSPVAG00000001760	SMARCAD1	100	60.380	Pteropus_vampyrus
ENSCSEG00000014419	-	78	74.525	ENSPNYG00000010087	smarcad1a	98	73.447	Pundamilia_nyererei
ENSCSEG00000014419	-	100	56.102	ENSPNAG00000001663	smarcad1a	100	56.072	Pygocentrus_nattereri
ENSCSEG00000014419	-	80	68.605	ENSPNAG00000010099	smarcad1b	81	68.605	Pygocentrus_nattereri
ENSCSEG00000014419	-	100	45.878	ENSRNOG00000006391	Smarcad1	95	62.351	Rattus_norvegicus
ENSCSEG00000014419	-	90	59.041	ENSRBIG00000041989	SMARCAD1	84	60.776	Rhinopithecus_bieti
ENSCSEG00000014419	-	90	59.041	ENSRROG00000035309	SMARCAD1	84	60.776	Rhinopithecus_roxellana
ENSCSEG00000014419	-	99	57.503	ENSSBOG00000032114	SMARCAD1	100	65.268	Saimiri_boliviensis_boliviensis
ENSCSEG00000014419	-	83	62.798	ENSSHAG00000001279	SMARCAD1	81	62.798	Sarcophilus_harrisii
ENSCSEG00000014419	-	100	57.077	ENSSFOG00015016814	smarcad1b	100	57.435	Scleropages_formosus
ENSCSEG00000014419	-	70	68.627	ENSSFOG00015020909	smarcad1a	94	68.627	Scleropages_formosus
ENSCSEG00000014419	-	100	74.594	ENSSMAG00000001326	smarcad1a	100	74.793	Scophthalmus_maximus
ENSCSEG00000014419	-	82	75.563	ENSSDUG00000022338	smarcad1a	99	76.822	Seriola_dumerili
ENSCSEG00000014419	-	99	71.737	ENSSLDG00000024986	smarcad1a	100	70.806	Seriola_lalandi_dorsalis
ENSCSEG00000014419	-	58	66.891	ENSSPUG00000004633	SMARCAD1	99	67.059	Sphenodon_punctatus
ENSCSEG00000014419	-	100	72.169	ENSSPAG00000001970	smarcad1a	100	72.274	Stegastes_partitus
ENSCSEG00000014419	-	91	58.904	ENSSSCG00000009193	SMARCAD1	96	60.545	Sus_scrofa
ENSCSEG00000014419	-	85	53.132	ENSTGUG00000003127	SMARCAD1	94	61.829	Taeniopygia_guttata
ENSCSEG00000014419	-	91	79.858	ENSTNIG00000017585	smarcad1a	99	79.858	Tetraodon_nigroviridis
ENSCSEG00000014419	-	79	67.063	ENSTBEG00000002789	SMARCAD1	87	67.063	Tupaia_belangeri
ENSCSEG00000014419	-	85	58.687	ENSTTRG00000000226	SMARCAD1	83	60.315	Tursiops_truncatus
ENSCSEG00000014419	-	91	59.041	ENSUAMG00000022262	SMARCAD1	96	60.689	Ursus_americanus
ENSCSEG00000014419	-	91	58.904	ENSUMAG00000004549	SMARCAD1	96	60.545	Ursus_maritimus
ENSCSEG00000014419	-	96	58.904	ENSVVUG00000007271	SMARCAD1	100	59.748	Vulpes_vulpes
ENSCSEG00000014419	-	95	48.099	ENSXETG00000019214	smarcad1	97	57.410	Xenopus_tropicalis
ENSCSEG00000014419	-	91	77.350	ENSXCOG00000005232	smarcad1a	85	87.500	Xiphophorus_couchianus
ENSCSEG00000014419	-	100	65.770	ENSXMAG00000015350	smarcad1a	100	65.653	Xiphophorus_maculatus