EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000014617 (Gene tree)
Gene ID: 103391742
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: mRNA decay activator protein ZFP36L2-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2678 bases
Position: chr1:33943582-33946259
Accession: 103391742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000022933	zf-CCCH	PF00642.24	2.8e-28	1	4
ENSCSEP00000022933	zf-CCCH	PF00642.24	2.8e-28	2	4
ENSCSEP00000022933	zf-CCCH	PF00642.24	2.8e-28	3	4
ENSCSEP00000022933	zf-CCCH	PF00642.24	2.8e-28	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000023228	-	1870	XM_008328138	ENSCSEP00000022933	321 (aa)	XP_008326360	UPI0004968DEB

Gene Model

Click here to download ENSCSEG00000014617's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04114	Oocyte meiosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014617	cth1	90	64.236	ENSAPOG00000012552	cth1	95	66.667	Acanthochromis_polyacanthus
ENSCSEG00000014617	cth1	88	63.604	ENSACIG00000016026	cth1	99	61.420	Amphilophus_citrinellus
ENSCSEG00000014617	cth1	100	68.224	ENSAOCG00000001644	cth1	100	70.405	Amphiprion_ocellaris
ENSCSEG00000014617	cth1	100	68.224	ENSAPEG00000008930	cth1	100	70.405	Amphiprion_percula
ENSCSEG00000014617	cth1	99	74.312	ENSATEG00000002281	cth1	97	71.560	Anabas_testudineus
ENSCSEG00000014617	cth1	90	60.900	ENSACLG00000015353	cth1	95	61.592	Astatotilapia_calliptera
ENSCSEG00000014617	cth1	98	54.955	ENSAMXG00000025717	cth1	92	55.844	Astyanax_mexicanus
ENSCSEG00000014617	cth1	100	58.385	ENSCVAG00000001680	cth1	65	59.133	Cyprinodon_variegatus
ENSCSEG00000014617	cth1	91	56.818	ENSDARG00000057328	cth1	90	54.785	Danio_rerio
ENSCSEG00000014617	cth1	99	55.072	ENSELUG00000012738	cth1	68	61.702	Esox_lucius
ENSCSEG00000014617	cth1	100	62.422	ENSFHEG00000022665	cth1	100	59.627	Fundulus_heteroclitus
ENSCSEG00000014617	cth1	99	64.615	ENSGMOG00000007360	cth1	100	63.692	Gadus_morhua
ENSCSEG00000014617	cth1	100	59.133	ENSGAFG00000019288	cth1	100	57.764	Gambusia_affinis
ENSCSEG00000014617	cth1	99	65.938	ENSGACG00000000802	cth1	99	65.000	Gasterosteus_aculeatus
ENSCSEG00000014617	cth1	100	62.305	ENSHBUG00000014400	cth1	100	62.617	Haplochromis_burtoni
ENSCSEG00000014617	cth1	99	52.038	ENSHCOG00000010276	cth1	77	55.508	Hippocampus_comes
ENSCSEG00000014617	cth1	97	57.895	ENSIPUG00000018040	cth1	90	55.738	Ictalurus_punctatus
ENSCSEG00000014617	cth1	100	61.801	ENSKMAG00000005944	cth1	100	63.354	Kryptolebias_marmoratus
ENSCSEG00000014617	cth1	100	75.385	ENSLBEG00000019253	cth1	100	74.383	Labrus_bergylta
ENSCSEG00000014617	cth1	59	54.839	ENSLOCG00000002047	cth1	98	49.545	Lepisosteus_oculatus
ENSCSEG00000014617	cth1	99	60.743	ENSMAMG00000001525	cth1	60	68.584	Mastacembelus_armatus
ENSCSEG00000014617	cth1	100	61.994	ENSMZEG00005022335	cth1	100	62.617	Maylandia_zebra
ENSCSEG00000014617	cth1	94	72.313	ENSMMOG00000020518	cth1	100	71.010	Mola_mola
ENSCSEG00000014617	cth1	100	60.053	ENSMALG00000020738	cth1	58	71.556	Monopterus_albus
ENSCSEG00000014617	cth1	88	61.620	ENSNBRG00000022789	cth1	88	62.324	Neolamprologus_brichardi
ENSCSEG00000014617	cth1	99	63.750	ENSONIG00000021318	cth1	99	64.688	Oreochromis_niloticus
ENSCSEG00000014617	cth1	100	59.385	ENSORLG00000022847	cth1	100	57.846	Oryzias_latipes
ENSCSEG00000014617	cth1	100	59.938	ENSORLG00020011979	cth1	100	58.075	Oryzias_latipes_hni
ENSCSEG00000014617	cth1	100	59.692	ENSORLG00015013084	cth1	100	58.154	Oryzias_latipes_hsok
ENSCSEG00000014617	cth1	100	58.075	ENSOMEG00000005809	cth1	85	58.696	Oryzias_melastigma
ENSCSEG00000014617	cth1	97	49.852	ENSPKIG00000015883	cth1	88	47.896	Paramormyrops_kingsleyae
ENSCSEG00000014617	cth1	99	71.254	ENSPMGG00000004275	cth1	100	68.308	Periophthalmus_magnuspinnatus
ENSCSEG00000014617	cth1	100	59.568	ENSPFOG00000013583	cth1	94	58.879	Poecilia_formosa
ENSCSEG00000014617	cth1	100	59.568	ENSPLAG00000018158	cth1	94	58.879	Poecilia_latipinna
ENSCSEG00000014617	cth1	100	59.692	ENSPMEG00000005744	cth1	100	59.006	Poecilia_mexicana
ENSCSEG00000014617	cth1	99	60.436	ENSPREG00000004099	cth1	99	60.063	Poecilia_reticulata
ENSCSEG00000014617	cth1	90	61.458	ENSPNYG00000016705	cth1	85	60.370	Pundamilia_nyererei
ENSCSEG00000014617	cth1	97	55.864	ENSPNAG00000013147	cth1	90	53.268	Pygocentrus_nattereri
ENSCSEG00000014617	cth1	92	55.096	ENSSFOG00015017190	cth1	67	60.538	Scleropages_formosus
ENSCSEG00000014617	cth1	100	75.926	ENSSMAG00000007977	cth1	100	75.926	Scophthalmus_maximus
ENSCSEG00000014617	cth1	100	74.320	ENSSDUG00000004321	cth1	100	74.018	Seriola_dumerili
ENSCSEG00000014617	cth1	100	74.699	ENSSLDG00000012760	cth1	100	73.795	Seriola_lalandi_dorsalis
ENSCSEG00000014617	cth1	99	74.320	ENSSLDG00000010023	-	100	73.414	Seriola_lalandi_dorsalis
ENSCSEG00000014617	cth1	100	74.096	ENSSLDG00000004516	-	100	73.193	Seriola_lalandi_dorsalis
ENSCSEG00000014617	cth1	100	70.093	ENSSPAG00000018659	cth1	100	70.093	Stegastes_partitus
ENSCSEG00000014617	cth1	100	65.538	ENSTRUG00000012770	cth1	100	65.538	Takifugu_rubripes
ENSCSEG00000014617	cth1	100	64.832	ENSTNIG00000000740	cth1	100	63.385	Tetraodon_nigroviridis
ENSCSEG00000014617	cth1	83	56.226	ENSXCOG00000003710	cth1	82	52.756	Xiphophorus_couchianus
ENSCSEG00000014617	cth1	100	60.909	ENSXMAG00000023885	cth1	100	59.385	Xiphophorus_maculatus