EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000014677 (Gene tree)
Gene ID
103394295
Gene Symbol
-
Alias
-
Full Name
RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Minus strand
Length
298241 bases
Position
chr18:8575148-8873388
Accession
103394295
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000023090RRM_1PF00076.227.8e-3212
ENSCSEP00000023090RRM_1PF00076.227.8e-3222
ENSCSEP00000023082RRM_1PF00076.222e-3112
ENSCSEP00000023082RRM_1PF00076.222e-3122
ENSCSEP00000023013RRM_1PF00076.224.9e-3112
ENSCSEP00000023013RRM_1PF00076.224.9e-3122
ENSCSEP00000023027RRM_1PF00076.225.2e-3112
ENSCSEP00000023027RRM_1PF00076.225.2e-3122
ENSCSEP00000023054RRM_1PF00076.229.8e-3112
ENSCSEP00000023054RRM_1PF00076.229.8e-3122
ENSCSEP00000023064RRM_1PF00076.221.1e-3012
ENSCSEP00000023064RRM_1PF00076.221.1e-3022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000023354-3785XM_008331543ENSCSEP00000023054649 (aa)XP_024920877UPI000D625086
ENSCSET00000023382-1050-ENSCSEP00000023082349 (aa)--
ENSCSET00000023389-777-ENSCSEP00000023090258 (aa)--
ENSCSET00000023364-2037-ENSCSEP00000023064678 (aa)--
ENSCSET00000023325-4212XM_008331542ENSCSEP00000023027523 (aa)XP_008329764-
ENSCSET00000023311-3636-ENSCSEP00000023013509 (aa)--
Gene Model
Click here to download ENSCSEG00000014677's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014677's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000014677-9768.182ENSCSEG00000010652RBMS19468.466
ENSCSEG00000014677-6737.158ENSCSEG00000020141elavl46237.158
ENSCSEG00000014677-6634.091ENSCSEG00000003608elavl1a8730.244
ENSCSEG00000014677-6540.789ENSCSEG00000015335-5540.789
ENSCSEG00000014677-7835.000ENSCSEG00000021095elavl37035.106
ENSCSEG00000014677-6333.750ENSCSEG00000002581celf3b5237.500
ENSCSEG00000014677-8561.873ENSCSEG00000000889rbms1a8959.327
ENSCSEG00000014677-7438.119ENSCSEG00000006335elavl26537.879
ENSCSEG00000014677-6535.000ENSCSEG00000007749si:dkey-205h23.25738.889
ENSCSEG00000014677-7586.528ENSCSEG00000003790rbms2a7681.538
ENSCSEG00000014677-6738.961ENSCSEG00000008675celf15839.474
ENSCSEG00000014677-6339.474ENSCSEG00000003342-5239.474
ENSCSEG00000014677-7236.957ENSCSEG00000000688-8632.524
ENSCSEG00000014677-6533.750ENSCSEG00000007913celf3a5833.750
ENSCSEG00000014677-6336.250ENSCSEG00000007074celf46040.278
ENSCSEG00000014677-6035.789ENSCSEG00000021295pabpc1l6835.789
ENSCSEG00000014677-7232.632ENSCSEG00000013324pabpc1a5932.632
ENSCSEG00000014677-9373.926ENSCSEG00000008180rbms2b9469.075
ENSCSEG00000014677-6936.250ENSCSEG00000002800celf5a5934.343
ENSCSEG00000014677-9486.905ENSCSEG00000010011RBMS310082.243
ENSCSEG00000014677-6033.010ENSCSEG00000000130pabpc46033.010
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000014677-9888.716ENSG00000144642RBMS310090.152Homo_sapiens
ENSCSEG00000014677-94100.000ENSAPOG00000003432-10097.837Acanthochromis_polyacanthus
ENSCSEG00000014677-9482.143ENSAPOG00000007266rbms39680.905Acanthochromis_polyacanthus
ENSCSEG00000014677-6291.743ENSAMEG00000005947RBMS310082.680Ailuropoda_melanoleuca
ENSCSEG00000014677-9172.586ENSACIG00000021113RBMS39674.526Amphilophus_citrinellus
ENSCSEG00000014677-9098.089ENSACIG00000006987-8996.626Amphilophus_citrinellus
ENSCSEG00000014677-94100.000ENSAOCG00000024104-10090.575Amphiprion_ocellaris
ENSCSEG00000014677-9486.561ENSAOCG00000021274rbms310082.051Amphiprion_ocellaris
ENSCSEG00000014677-9778.531ENSAPEG00000016299rbms38787.349Amphiprion_percula
ENSCSEG00000014677-94100.000ENSAPEG00000009481-10089.663Amphiprion_percula
ENSCSEG00000014677-94100.000ENSATEG00000008433-10098.077Anabas_testudineus
ENSCSEG00000014677-9487.251ENSATEG00000024295rbms310082.904Anabas_testudineus
ENSCSEG00000014677-9591.129ENSAPLG00000012270RBMS39983.796Anas_platyrhynchos
ENSCSEG00000014677-9591.129ENSACAG00000028664RBMS39987.915Anolis_carolinensis
ENSCSEG00000014677-9888.716ENSANAG00000021899RBMS310084.633Aotus_nancymaae
ENSCSEG00000014677-9599.184ENSACLG00000008976-10087.121Astatotilapia_calliptera
ENSCSEG00000014677-9486.800ENSACLG00000018506rbms310082.160Astatotilapia_calliptera
ENSCSEG00000014677-9488.066ENSAMXG00000043770-10087.209Astyanax_mexicanus
ENSCSEG00000014677-9493.827ENSAMXG00000020388rbms310089.928Astyanax_mexicanus
ENSCSEG00000014677-9590.361ENSBTAG00000044062RBMS310088.180Bos_taurus
ENSCSEG00000014677-9888.716ENSCJAG00000004312RBMS310084.633Callithrix_jacchus
ENSCSEG00000014677-9590.361ENSCAFG00000005464RBMS39984.055Canis_familiaris
ENSCSEG00000014677-9590.361ENSCAFG00020024980RBMS310084.055Canis_lupus_dingo
ENSCSEG00000014677-9590.361ENSCHIG00000009144RBMS39987.707Capra_hircus
ENSCSEG00000014677-7191.935ENSTSYG00000002615RBMS310084.384Carlito_syrichta
ENSCSEG00000014677-7793.939ENSCAPG00000017783RBMS39582.038Cavia_aperea
ENSCSEG00000014677-9591.803ENSCPOG00000006457RBMS39987.560Cavia_porcellus
ENSCSEG00000014677-9888.716ENSCCAG00000008671RBMS310084.633Cebus_capucinus
ENSCSEG00000014677-9788.716ENSCATG00000013222RBMS310084.174Cercocebus_atys
ENSCSEG00000014677-9590.361ENSCLAG00000005866RBMS39986.761Chinchilla_lanigera
ENSCSEG00000014677-6581.034ENSCSAG00000009655RBMS39986.667Chlorocebus_sabaeus
ENSCSEG00000014677-7792.537ENSCHOG00000000758RBMS38688.000Choloepus_hoffmanni
ENSCSEG00000014677-9591.129ENSCPBG00000022678RBMS39987.678Chrysemys_picta_bellii
ENSCSEG00000014677-9788.716ENSCANG00000032137RBMS310084.404Colobus_angolensis_palliatus
ENSCSEG00000014677-9591.393ENSCGRG00001007243Rbms39985.646Cricetulus_griseus_chok1gshd
ENSCSEG00000014677-9591.393ENSCGRG00000004599Rbms39985.646Cricetulus_griseus_crigri
ENSCSEG00000014677-9488.664ENSCVAG00000022354rbms310083.452Cyprinodon_variegatus
ENSCSEG00000014677-9499.588ENSCVAG00000022814-10097.128Cyprinodon_variegatus
ENSCSEG00000014677-9494.650ENSDARG00000044574rbms310095.139Danio_rerio
ENSCSEG00000014677-9590.361ENSDNOG00000016645RBMS310083.215Dasypus_novemcinctus
ENSCSEG00000014677-9590.361ENSDORG00000007220Rbms39986.288Dipodomys_ordii
ENSCSEG00000014677-7493.373ENSETEG00000009485-8069.714Echinops_telfairi
ENSCSEG00000014677-6074.026ENSEBUG00000005830rbms38954.182Eptatretus_burgeri
ENSCSEG00000014677-9590.361ENSEASG00005006152RBMS39986.998Equus_asinus_asinus
ENSCSEG00000014677-9590.361ENSECAG00000017871RBMS39986.998Equus_caballus
ENSCSEG00000014677-9479.435ENSEEUG00000014337RBMS310079.293Erinaceus_europaeus
ENSCSEG00000014677-9486.056ENSELUG00000002862rbms310080.516Esox_lucius
ENSCSEG00000014677-9597.959ENSELUG00000006905-9897.959Esox_lucius
ENSCSEG00000014677-9590.361ENSFCAG00000002130RBMS39986.761Felis_catus
ENSCSEG00000014677-9591.532ENSFALG00000009165RBMS39987.915Ficedula_albicollis
ENSCSEG00000014677-9590.361ENSFDAG00000008278RBMS39986.761Fukomys_damarensis
ENSCSEG00000014677-9079.375ENSFHEG00000004787RBMS39575.405Fundulus_heteroclitus
ENSCSEG00000014677-5099.219ENSFHEG00000016746-9399.219Fundulus_heteroclitus
ENSCSEG00000014677-8795.738ENSGMOG00000002600-9688.665Gadus_morhua
ENSCSEG00000014677-9591.532ENSGALG00000011439RBMS39987.915Gallus_gallus
ENSCSEG00000014677-9488.710ENSGAFG00000000168rbms310083.019Gambusia_affinis
ENSCSEG00000014677-9499.588ENSGAFG00000003329-10097.122Gambusia_affinis
ENSCSEG00000014677-6682.403ENSGAGG00000004039RBMS310086.496Gopherus_agassizii
ENSCSEG00000014677-9888.716ENSGGOG00000007228RBMS310084.633Gorilla_gorilla
ENSCSEG00000014677-10096.675ENSHBUG00000019785-9596.675Haplochromis_burtoni
ENSCSEG00000014677-9486.800ENSHBUG00000021196rbms39486.245Haplochromis_burtoni
ENSCSEG00000014677-9590.361ENSHGLG00000002170RBMS39986.998Heterocephalus_glaber_female
ENSCSEG00000014677-9590.361ENSHGLG00100014278RBMS39986.998Heterocephalus_glaber_male
ENSCSEG00000014677-9497.942ENSHCOG00000007894-10096.403Hippocampus_comes
ENSCSEG00000014677-9494.239ENSIPUG00000017680rbms310090.168Ictalurus_punctatus
ENSCSEG00000014677-9590.763ENSSTOG00000006324RBMS39987.234Ictidomys_tridecemlineatus
ENSCSEG00000014677-9587.149ENSJJAG00000014708Rbms39983.924Jaculus_jaculus
ENSCSEG00000014677-9485.827ENSKMAG00000020500rbms310080.930Kryptolebias_marmoratus
ENSCSEG00000014677-9499.588ENSKMAG00000012586-10097.115Kryptolebias_marmoratus
ENSCSEG00000014677-10096.533ENSLBEG00000027388-10096.875Labrus_bergylta
ENSCSEG00000014677-7068.199ENSLBEG00000006677rbms39775.379Labrus_bergylta
ENSCSEG00000014677-9492.683ENSLACG00000010581RBMS310089.786Latimeria_chalumnae
ENSCSEG00000014677-7084.739ENSLOCG00000002328rbms310090.068Lepisosteus_oculatus
ENSCSEG00000014677-9590.361ENSLAFG00000000354RBMS310083.827Loxodonta_africana
ENSCSEG00000014677-9788.716ENSMFAG00000033300RBMS39986.998Macaca_fascicularis
ENSCSEG00000014677-9788.716ENSMMUG00000004404RBMS39986.998Macaca_mulatta
ENSCSEG00000014677-9788.716ENSMNEG00000035839RBMS310084.404Macaca_nemestrina
ENSCSEG00000014677-9788.716ENSMLEG00000029464RBMS310084.174Mandrillus_leucophaeus
ENSCSEG00000014677-9486.111ENSMAMG00000024043rbms310083.879Mastacembelus_armatus
ENSCSEG00000014677-10097.442ENSMAMG00000002176-10097.442Mastacembelus_armatus
ENSCSEG00000014677-94100.000ENSMZEG00005026469-9694.159Maylandia_zebra
ENSCSEG00000014677-9486.800ENSMZEG00005006308rbms310082.160Maylandia_zebra
ENSCSEG00000014677-9591.393ENSMAUG00000016436Rbms39985.646Mesocricetus_auratus
ENSCSEG00000014677-9888.327ENSMICG00000049249RBMS310084.633Microcebus_murinus
ENSCSEG00000014677-9591.803ENSMOCG00000006997Rbms39985.407Microtus_ochrogaster
ENSCSEG00000014677-8985.625ENSMMOG00000008471RBMS38988.146Mola_mola
ENSCSEG00000014677-94100.000ENSMMOG00000015071-10096.154Mola_mola
ENSCSEG00000014677-9584.585ENSMODG00000015125RBMS39978.936Monodelphis_domestica
ENSCSEG00000014677-9486.905ENSMALG00000019536RBMS310080.562Monopterus_albus
ENSCSEG00000014677-9499.588ENSMALG00000009155-10097.837Monopterus_albus
ENSCSEG00000014677-9589.754MGP_CAROLIEiJ_G0032783Rbms310090.338Mus_caroli
ENSCSEG00000014677-9590.984ENSMUSG00000039607Rbms310091.787Mus_musculus
ENSCSEG00000014677-9590.984MGP_PahariEiJ_G0015650Rbms310091.787Mus_pahari
ENSCSEG00000014677-9590.984MGP_SPRETEiJ_G0033930Rbms310091.787Mus_spretus
ENSCSEG00000014677-9590.361ENSMPUG00000011956RBMS310084.055Mustela_putorius_furo
ENSCSEG00000014677-9590.361ENSMLUG00000000659RBMS310087.470Myotis_lucifugus
ENSCSEG00000014677-9591.803ENSNGAG00000014039Rbms39987.081Nannospalax_galili
ENSCSEG00000014677-94100.000ENSNBRG00000018065-10096.635Neolamprologus_brichardi
ENSCSEG00000014677-9888.716ENSNLEG00000004129RBMS310084.633Nomascus_leucogenys
ENSCSEG00000014677-9479.116ENSMEUG00000004772RBMS39977.574Notamacropus_eugenii
ENSCSEG00000014677-9590.361ENSOPRG00000006808RBMS38584.296Ochotona_princeps
ENSCSEG00000014677-9590.763ENSODEG00000003651RBMS39987.234Octodon_degus
ENSCSEG00000014677-9487.500ENSONIG00000007172rbms310077.123Oreochromis_niloticus
ENSCSEG00000014677-9591.566ENSOANG00000010529RBMS39984.966Ornithorhynchus_anatinus
ENSCSEG00000014677-9589.558ENSOCUG00000004840RBMS39983.371Oryctolagus_cuniculus
ENSCSEG00000014677-9487.500ENSORLG00000005370RBMS310081.368Oryzias_latipes
ENSCSEG00000014677-94100.000ENSORLG00000002306-10096.635Oryzias_latipes
ENSCSEG00000014677-94100.000ENSORLG00020008496-10096.875Oryzias_latipes_hni
ENSCSEG00000014677-9487.500ENSORLG00020022674RBMS310081.132Oryzias_latipes_hni
ENSCSEG00000014677-94100.000ENSORLG00015015719-10096.875Oryzias_latipes_hsok
ENSCSEG00000014677-9487.903ENSORLG00015005509rbms310081.604Oryzias_latipes_hsok
ENSCSEG00000014677-8998.065ENSOMEG00000007677-10096.335Oryzias_melastigma
ENSCSEG00000014677-9488.710ENSOMEG00000014805RBMS310082.075Oryzias_melastigma
ENSCSEG00000014677-9590.361ENSOARG00000014684RBMS39984.055Ovis_aries
ENSCSEG00000014677-9888.716ENSPPAG00000036519RBMS310084.633Pan_paniscus
ENSCSEG00000014677-9589.960ENSPPRG00000002761RBMS310083.945Panthera_pardus
ENSCSEG00000014677-9589.960ENSPTIG00000011568RBMS310086.525Panthera_tigris_altaica
ENSCSEG00000014677-9888.716ENSPTRG00000014709RBMS39987.234Pan_troglodytes
ENSCSEG00000014677-9788.716ENSPANG00000010234RBMS310084.174Papio_anubis
ENSCSEG00000014677-9593.033ENSPKIG00000007989-10093.023Paramormyrops_kingsleyae
ENSCSEG00000014677-8093.720ENSPKIG00000016025-7393.720Paramormyrops_kingsleyae
ENSCSEG00000014677-9590.726ENSPSIG00000005269RBMS39987.441Pelodiscus_sinensis
ENSCSEG00000014677-9877.620ENSPMGG00000021544rbms38686.145Periophthalmus_magnuspinnatus
ENSCSEG00000014677-8999.355ENSPMGG00000021683-10097.120Periophthalmus_magnuspinnatus
ENSCSEG00000014677-9888.189ENSPEMG00000001117Rbms39983.092Peromyscus_maniculatus_bairdii
ENSCSEG00000014677-9489.960ENSPCIG00000006106RBMS38989.720Phascolarctos_cinereus
ENSCSEG00000014677-9488.710ENSPFOG00000017887rbms310083.255Poecilia_formosa
ENSCSEG00000014677-5099.219ENSPLAG00000005161-7799.219Poecilia_latipinna
ENSCSEG00000014677-7980.783ENSPLAG00000016866-8381.173Poecilia_latipinna
ENSCSEG00000014677-5791.216ENSPMEG00000012831-7290.798Poecilia_mexicana
ENSCSEG00000014677-9499.588ENSPMEG00000002993-10097.122Poecilia_mexicana
ENSCSEG00000014677-9485.830ENSPREG00000011880rbms310081.754Poecilia_reticulata
ENSCSEG00000014677-94100.000ENSPREG00000018221-9797.222Poecilia_reticulata
ENSCSEG00000014677-9567.470ENSPPYG00000014050RBMS38271.071Pongo_abelii
ENSCSEG00000014677-9475.403ENSPCAG00000006307RBMS39964.920Procavia_capensis
ENSCSEG00000014677-9888.716ENSPCOG00000017136RBMS310084.862Propithecus_coquereli
ENSCSEG00000014677-7894.286ENSPVAG00000014037RBMS39975.399Pteropus_vampyrus
ENSCSEG00000014677-9599.184ENSPNYG00000012624-10096.875Pundamilia_nyererei
ENSCSEG00000014677-9486.800ENSPNYG00000010546rbms310081.925Pundamilia_nyererei
ENSCSEG00000014677-9494.239ENSPNAG00000001800rbms310089.928Pygocentrus_nattereri
ENSCSEG00000014677-7191.803ENSPNAG00000026763-7791.908Pygocentrus_nattereri
ENSCSEG00000014677-9591.393ENSRNOG00000025881Rbms310085.646Rattus_norvegicus
ENSCSEG00000014677-9788.716ENSRBIG00000035863RBMS310084.174Rhinopithecus_bieti
ENSCSEG00000014677-8592.568ENSRROG00000027512RBMS39584.576Rhinopithecus_roxellana
ENSCSEG00000014677-9888.716ENSSBOG00000020232RBMS310084.633Saimiri_boliviensis_boliviensis
ENSCSEG00000014677-8593.581ENSSHAG00000002411RBMS39188.991Sarcophilus_harrisii
ENSCSEG00000014677-9496.708ENSSFOG00015008578rbms310093.029Scleropages_formosus
ENSCSEG00000014677-9499.588ENSSMAG00000020065-9398.396Scophthalmus_maximus
ENSCSEG00000014677-9782.308ENSSMAG00000004997rbms39983.607Scophthalmus_maximus
ENSCSEG00000014677-94100.000ENSSDUG00000019287-10097.837Seriola_dumerili
ENSCSEG00000014677-9486.508ENSSDUG00000013656RBMS310082.710Seriola_dumerili
ENSCSEG00000014677-9485.882ENSSLDG00000020276RBMS310082.367Seriola_lalandi_dorsalis
ENSCSEG00000014677-94100.000ENSSLDG00000013224-10097.837Seriola_lalandi_dorsalis
ENSCSEG00000014677-7595.361ENSSARG00000000695RBMS39473.639Sorex_araneus
ENSCSEG00000014677-6392.273ENSSPUG00000017197RBMS39884.000Sphenodon_punctatus
ENSCSEG00000014677-94100.000ENSSPAG00000003983-10089.425Stegastes_partitus
ENSCSEG00000014677-9486.561ENSSPAG00000020693rbms310082.284Stegastes_partitus
ENSCSEG00000014677-9590.361ENSSSCG00000036381RBMS39987.234Sus_scrofa
ENSCSEG00000014677-7193.173ENSTGUG00000003572RBMS310084.226Taeniopygia_guttata
ENSCSEG00000014677-7798.876ENSTRUG00000007482-10085.680Takifugu_rubripes
ENSCSEG00000014677-9485.317ENSTRUG00000021719RBMS310080.374Takifugu_rubripes
ENSCSEG00000014677-8593.243ENSTBEG00000005362RBMS39486.819Tupaia_belangeri
ENSCSEG00000014677-9589.960ENSTTRG00000006202RBMS39984.174Tursiops_truncatus
ENSCSEG00000014677-9590.361ENSUMAG00000000263RBMS39984.055Ursus_maritimus
ENSCSEG00000014677-8580.068ENSVPAG00000003842RBMS39474.293Vicugna_pacos
ENSCSEG00000014677-8593.243ENSVVUG00000004660RBMS39990.870Vulpes_vulpes
ENSCSEG00000014677-6389.640ENSXETG00000032055RBMS39981.290Xenopus_tropicalis
ENSCSEG00000014677-8981.410ENSXCOG00000019600-9880.890Xiphophorus_couchianus
ENSCSEG00000014677-94100.000ENSXMAG00000014382-10097.362Xiphophorus_maculatus
ENSCSEG00000014677-9485.542ENSXMAG00000021783rbms310081.176Xiphophorus_maculatus

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