EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000014771 (Gene tree)
Gene ID
103393688
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Minus strand
Length
12672 bases
Position
chr17:15672191-15684862
Accession
103393688
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000023184ResIIIPF04851.153.6e-0911
ENSCSEP00000023184BRKPF07533.166.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000023489-4866XM_017040329ENSCSEP000000231841621 (aa)--
Gene Model
Click here to download ENSCSEG00000014771's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014771's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000014771smarca4a9967.943ENSCSEG00000019311SMARCA29368.010
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000014771smarca4a10087.256ENSG00000127616SMARCA49995.652Homo_sapiens
ENSCSEG00000014771smarca4a7592.759ENSAPOG00000003509smarca4a9890.087Acanthochromis_polyacanthus
ENSCSEG00000014771smarca4a9583.760ENSAPOG00000004542SMARCA49683.655Acanthochromis_polyacanthus
ENSCSEG00000014771smarca4a10083.040ENSAMEG00000010868SMARCA49782.564Ailuropoda_melanoleuca
ENSCSEG00000014771smarca4a9995.087ENSACIG00000021550smarca4a9594.968Amphilophus_citrinellus
ENSCSEG00000014771smarca4a9582.914ENSACIG00000003035-9383.367Amphilophus_citrinellus
ENSCSEG00000014771smarca4a9090.604ENSAOCG00000019167smarca4a9691.292Amphiprion_ocellaris
ENSCSEG00000014771smarca4a9485.390ENSAOCG00000009450-9485.608Amphiprion_ocellaris
ENSCSEG00000014771smarca4a10083.620ENSAPEG00000023108-9680.655Amphiprion_percula
ENSCSEG00000014771smarca4a9090.741ENSAPEG00000015559smarca4a9691.435Amphiprion_percula
ENSCSEG00000014771smarca4a10093.378ENSATEG00000011524smarca4a9694.282Anabas_testudineus
ENSCSEG00000014771smarca4a9984.005ENSATEG00000001094-9484.211Anabas_testudineus
ENSCSEG00000014771smarca4a9987.053ENSANAG00000036991SMARCA49783.010Aotus_nancymaae
ENSCSEG00000014771smarca4a9993.048ENSACLG00000000163smarca4a9394.311Astatotilapia_calliptera
ENSCSEG00000014771smarca4a9584.519ENSACLG00000008638-9483.099Astatotilapia_calliptera
ENSCSEG00000014771smarca4a9883.804ENSAMXG00000021023smarca4a9885.975Astyanax_mexicanus
ENSCSEG00000014771smarca4a9486.532ENSAMXG00000011238-9486.216Astyanax_mexicanus
ENSCSEG00000014771smarca4a10087.217ENSBTAG00000019220SMARCA49687.127Bos_taurus
ENSCSEG00000014771smarca4a10083.177ENSCJAG00000005936SMARCA49783.070Callithrix_jacchus
ENSCSEG00000014771smarca4a10087.020ENSCAFG00000017584SMARCA49686.860Canis_familiaris
ENSCSEG00000014771smarca4a10085.203ENSCAFG00020024620SMARCA49586.860Canis_lupus_dingo
ENSCSEG00000014771smarca4a10082.757ENSCHIG00000015318SMARCA49683.217Capra_hircus
ENSCSEG00000014771smarca4a10086.850ENSTSYG00000012966SMARCA49686.937Carlito_syrichta
ENSCSEG00000014771smarca4a9480.588ENSCAPG00000015932SMARCA48989.276Cavia_aperea
ENSCSEG00000014771smarca4a10086.654ENSCPOG00000015549SMARCA49686.797Cavia_porcellus
ENSCSEG00000014771smarca4a10083.626ENSCCAG00000031660SMARCA49583.794Cebus_capucinus
ENSCSEG00000014771smarca4a10087.203ENSCATG00000029530SMARCA49686.987Cercocebus_atys
ENSCSEG00000014771smarca4a10086.965ENSCLAG00000011946SMARCA49687.119Chinchilla_lanigera
ENSCSEG00000014771smarca4a10086.943ENSCPBG00000009994SMARCA49686.654Chrysemys_picta_bellii
ENSCSEG00000014771smarca4a10087.142ENSCANG00000036013SMARCA49686.987Colobus_angolensis_palliatus
ENSCSEG00000014771smarca4a10086.715ENSCGRG00001016732Smarca49686.671Cricetulus_griseus_chok1gshd
ENSCSEG00000014771smarca4a10086.715ENSCGRG00000017242Smarca49686.671Cricetulus_griseus_crigri
ENSCSEG00000014771smarca4a9982.684ENSCVAG00000003018-9482.841Cyprinodon_variegatus
ENSCSEG00000014771smarca4a9992.737ENSCVAG00000006979smarca4a9692.337Cyprinodon_variegatus
ENSCSEG00000014771smarca4a9283.311ENSDARG00000104339SMARCA49482.294Danio_rerio
ENSCSEG00000014771smarca4a10089.004ENSDARG00000077226smarca4a9688.600Danio_rerio
ENSCSEG00000014771smarca4a8183.701ENSDNOG00000048847SMARCA49090.445Dasypus_novemcinctus
ENSCSEG00000014771smarca4a8582.009ENSDORG00000002544Smarca49179.233Dipodomys_ordii
ENSCSEG00000014771smarca4a9476.260ENSETEG00000013361SMARCA49075.282Echinops_telfairi
ENSCSEG00000014771smarca4a10087.020ENSEASG00005006167SMARCA410084.905Equus_asinus_asinus
ENSCSEG00000014771smarca4a10087.081ENSECAG00000008334SMARCA49686.860Equus_caballus
ENSCSEG00000014771smarca4a10089.152ENSELUG00000010247smarca4a9788.631Esox_lucius
ENSCSEG00000014771smarca4a9879.437ENSELUG00000023232-9777.456Esox_lucius
ENSCSEG00000014771smarca4a10086.679ENSFCAG00000004894SMARCA49686.696Felis_catus
ENSCSEG00000014771smarca4a9183.970ENSFALG00000004208SMARCA49284.621Ficedula_albicollis
ENSCSEG00000014771smarca4a9287.575ENSFDAG00000012237SMARCA49387.699Fukomys_damarensis
ENSCSEG00000014771smarca4a9692.191ENSFHEG00000010182smarca4a9691.562Fundulus_heteroclitus
ENSCSEG00000014771smarca4a10084.602ENSFHEG00000007902-9683.458Fundulus_heteroclitus
ENSCSEG00000014771smarca4a8890.678ENSGMOG00000002649smarca4a9088.393Gadus_morhua
ENSCSEG00000014771smarca4a9080.482ENSGMOG00000005756-9079.776Gadus_morhua
ENSCSEG00000014771smarca4a7486.960ENSGALG00000047145SMARCA49586.475Gallus_gallus
ENSCSEG00000014771smarca4a9980.881ENSGAFG00000008827-9480.992Gambusia_affinis
ENSCSEG00000014771smarca4a9091.992ENSGAFG00000014900smarca4a9992.770Gambusia_affinis
ENSCSEG00000014771smarca4a9892.000ENSGACG00000006691smarca4a9792.215Gasterosteus_aculeatus
ENSCSEG00000014771smarca4a10079.181ENSGACG00000016033-9779.213Gasterosteus_aculeatus
ENSCSEG00000014771smarca4a10087.164ENSGAGG00000016757SMARCA49686.882Gopherus_agassizii
ENSCSEG00000014771smarca4a10087.203ENSGGOG00000009882SMARCA49686.987Gorilla_gorilla
ENSCSEG00000014771smarca4a10084.578ENSHBUG00000005447-9681.729Haplochromis_burtoni
ENSCSEG00000014771smarca4a10094.611ENSHBUG00000021172smarca4a9694.413Haplochromis_burtoni
ENSCSEG00000014771smarca4a10086.468ENSHGLG00000010519SMARCA49686.352Heterocephalus_glaber_female
ENSCSEG00000014771smarca4a10086.427ENSHGLG00100013774SMARCA49686.246Heterocephalus_glaber_male
ENSCSEG00000014771smarca4a9393.981ENSHCOG00000009510smarca4a9393.968Hippocampus_comes
ENSCSEG00000014771smarca4a9884.303ENSIPUG00000016346-9783.797Ictalurus_punctatus
ENSCSEG00000014771smarca4a10089.425ENSIPUG00000006107smarca4a9689.037Ictalurus_punctatus
ENSCSEG00000014771smarca4a10086.959ENSSTOG00000007939SMARCA49686.734Ictidomys_tridecemlineatus
ENSCSEG00000014771smarca4a8187.803ENSJJAG00000012877Smarca49684.406Jaculus_jaculus
ENSCSEG00000014771smarca4a9784.116ENSKMAG00000019518-9683.530Kryptolebias_marmoratus
ENSCSEG00000014771smarca4a10092.581ENSKMAG00000011931smarca4a9693.007Kryptolebias_marmoratus
ENSCSEG00000014771smarca4a9590.194ENSLBEG00000017383smarca4a9489.112Labrus_bergylta
ENSCSEG00000014771smarca4a9971.110ENSLBEG00000020655-9471.365Labrus_bergylta
ENSCSEG00000014771smarca4a5281.125ENSLACG00000015309SMARCA410080.657Latimeria_chalumnae
ENSCSEG00000014771smarca4a10085.749ENSLOCG00000007820smarca4a9685.225Lepisosteus_oculatus
ENSCSEG00000014771smarca4a10086.983ENSLAFG00000001433SMARCA49686.759Loxodonta_africana
ENSCSEG00000014771smarca4a10085.027ENSMFAG00000032146SMARCA49586.987Macaca_fascicularis
ENSCSEG00000014771smarca4a10087.203ENSMMUG00000012042SMARCA49591.394Macaca_mulatta
ENSCSEG00000014771smarca4a10087.248ENSMNEG00000028512SMARCA410084.707Macaca_nemestrina
ENSCSEG00000014771smarca4a10087.105ENSMLEG00000034976SMARCA49686.759Mandrillus_leucophaeus
ENSCSEG00000014771smarca4a10095.153ENSMAMG00000009256smarca4a9695.102Mastacembelus_armatus
ENSCSEG00000014771smarca4a10083.094ENSMAMG00000002841-9485.983Mastacembelus_armatus
ENSCSEG00000014771smarca4a9585.108ENSMZEG00005023861-9482.117Maylandia_zebra
ENSCSEG00000014771smarca4a10094.492ENSMZEG00005003889smarca4a9694.289Maylandia_zebra
ENSCSEG00000014771smarca4a10086.436ENSMAUG00000020731Smarca49686.381Mesocricetus_auratus
ENSCSEG00000014771smarca4a10086.983ENSMICG00000009806SMARCA49686.822Microcebus_murinus
ENSCSEG00000014771smarca4a10086.557ENSMOCG00000022209Smarca49686.507Microtus_ochrogaster
ENSCSEG00000014771smarca4a9980.779ENSMMOG00000008466-9580.206Mola_mola
ENSCSEG00000014771smarca4a9592.442ENSMMOG00000007571smarca4a9492.483Mola_mola
ENSCSEG00000014771smarca4a10085.689ENSMODG00000006287SMARCA49684.801Monodelphis_domestica
ENSCSEG00000014771smarca4a8682.349ENSMALG00000021534-9682.077Monopterus_albus
ENSCSEG00000014771smarca4a9694.215ENSMALG00000003388smarca4a9694.151Monopterus_albus
ENSCSEG00000014771smarca4a10086.829MGP_CAROLIEiJ_G0031879Smarca410086.278Mus_caroli
ENSCSEG00000014771smarca4a10086.829ENSMUSG00000032187Smarca49986.278Mus_musculus
ENSCSEG00000014771smarca4a10087.209MGP_PahariEiJ_G0014745Smarca410086.688Mus_pahari
ENSCSEG00000014771smarca4a10086.829MGP_SPRETEiJ_G0033003Smarca410086.278Mus_spretus
ENSCSEG00000014771smarca4a10087.142ENSMPUG00000005711SMARCA49686.924Mustela_putorius_furo
ENSCSEG00000014771smarca4a10087.203ENSMLUG00000004491-9686.987Myotis_lucifugus
ENSCSEG00000014771smarca4a10086.927ENSNGAG00000021852Smarca49686.890Nannospalax_galili
ENSCSEG00000014771smarca4a9590.568ENSNBRG00000011457smarca4a9289.805Neolamprologus_brichardi
ENSCSEG00000014771smarca4a9083.630ENSNBRG00000018865-9683.857Neolamprologus_brichardi
ENSCSEG00000014771smarca4a9585.273ENSNLEG00000012389SMARCA49184.718Nomascus_leucogenys
ENSCSEG00000014771smarca4a7793.103ENSOPRG00000000885-7993.103Ochotona_princeps
ENSCSEG00000014771smarca4a10084.262ENSODEG00000017127SMARCA49683.909Octodon_degus
ENSCSEG00000014771smarca4a10094.672ENSONIG00000008196smarca4a9694.476Oreochromis_niloticus
ENSCSEG00000014771smarca4a10084.639ENSONIG00000018040-9681.852Oreochromis_niloticus
ENSCSEG00000014771smarca4a9781.042ENSOCUG00000001787SMARCA49480.378Oryctolagus_cuniculus
ENSCSEG00000014771smarca4a9584.247ENSORLG00000003955-9581.130Oryzias_latipes
ENSCSEG00000014771smarca4a9692.186ENSORLG00000015452smarca4a9692.058Oryzias_latipes
ENSCSEG00000014771smarca4a9691.868ENSORLG00020004611smarca4a9692.122Oryzias_latipes_hni
ENSCSEG00000014771smarca4a9584.194ENSORLG00020009728-9583.608Oryzias_latipes_hni
ENSCSEG00000014771smarca4a9691.868ENSORLG00015016560smarca4a9692.122Oryzias_latipes_hsok
ENSCSEG00000014771smarca4a9983.861ENSORLG00015007739-9583.661Oryzias_latipes_hsok
ENSCSEG00000014771smarca4a10092.940ENSOMEG00000007486smarca4a9692.743Oryzias_melastigma
ENSCSEG00000014771smarca4a9784.089ENSOMEG00000016626-9582.661Oryzias_melastigma
ENSCSEG00000014771smarca4a9085.996ENSOGAG00000016148SMARCA49685.704Otolemur_garnettii
ENSCSEG00000014771smarca4a9886.921ENSOARG00000017454SMARCA49786.747Ovis_aries
ENSCSEG00000014771smarca4a10087.203ENSPPAG00000043191SMARCA49686.987Pan_paniscus
ENSCSEG00000014771smarca4a10086.679ENSPPRG00000000064SMARCA49686.696Panthera_pardus
ENSCSEG00000014771smarca4a10087.203ENSPTRG00000010488SMARCA49686.987Pan_troglodytes
ENSCSEG00000014771smarca4a10086.006ENSPANG00000011042SMARCA410082.657Papio_anubis
ENSCSEG00000014771smarca4a9886.010ENSPKIG00000010087-9785.505Paramormyrops_kingsleyae
ENSCSEG00000014771smarca4a9788.328ENSPKIG00000007770SMARCA49688.508Paramormyrops_kingsleyae
ENSCSEG00000014771smarca4a10081.965ENSPSIG00000005547SMARCA49681.141Pelodiscus_sinensis
ENSCSEG00000014771smarca4a10086.618ENSPEMG00000020389Smarca49686.570Peromyscus_maniculatus_bairdii
ENSCSEG00000014771smarca4a10087.302ENSPCIG00000017138SMARCA49687.025Phascolarctos_cinereus
ENSCSEG00000014771smarca4a10083.653ENSPFOG00000012930-9783.478Poecilia_formosa
ENSCSEG00000014771smarca4a10090.583ENSPFOG00000007892smarca4a9691.436Poecilia_formosa
ENSCSEG00000014771smarca4a10090.644ENSPLAG00000014294smarca4a9691.499Poecilia_latipinna
ENSCSEG00000014771smarca4a9985.298ENSPLAG00000018616-9585.567Poecilia_latipinna
ENSCSEG00000014771smarca4a9584.640ENSPMEG00000008929-9583.827Poecilia_mexicana
ENSCSEG00000014771smarca4a9591.118ENSPMEG00000003725smarca4a9391.694Poecilia_mexicana
ENSCSEG00000014771smarca4a9584.436ENSPREG00000014823-9384.424Poecilia_reticulata
ENSCSEG00000014771smarca4a10090.612ENSPREG00000014608smarca4a9691.149Poecilia_reticulata
ENSCSEG00000014771smarca4a10085.245ENSPPYG00000009568SMARCA49684.715Pongo_abelii
ENSCSEG00000014771smarca4a7983.444ENSPCAG00000014054SMARCA47288.281Procavia_capensis
ENSCSEG00000014771smarca4a10086.922ENSPCOG00000023011SMARCA49686.759Propithecus_coquereli
ENSCSEG00000014771smarca4a9582.194ENSPVAG00000007787SMARCA49281.124Pteropus_vampyrus
ENSCSEG00000014771smarca4a9583.043ENSPNYG00000023995-9483.501Pundamilia_nyererei
ENSCSEG00000014771smarca4a9594.713ENSPNYG00000000717smarca4a9394.508Pundamilia_nyererei
ENSCSEG00000014771smarca4a9586.027ENSPNAG00000006636-9386.106Pygocentrus_nattereri
ENSCSEG00000014771smarca4a10086.829ENSRNOG00000009271Smarca49686.789Rattus_norvegicus
ENSCSEG00000014771smarca4a10085.257ENSRBIG00000038696SMARCA410083.558Rhinopithecus_bieti
ENSCSEG00000014771smarca4a10087.142ENSRROG00000045509SMARCA410083.558Rhinopithecus_roxellana
ENSCSEG00000014771smarca4a10086.951ENSSBOG00000026896SMARCA49487.468Saimiri_boliviensis_boliviensis
ENSCSEG00000014771smarca4a10087.302ENSSHAG00000001642SMARCA49687.025Sarcophilus_harrisii
ENSCSEG00000014771smarca4a9989.177ENSSFOG00015013823smarca49689.311Scleropages_formosus
ENSCSEG00000014771smarca4a9683.344ENSSFOG00015009921-9683.761Scleropages_formosus
ENSCSEG00000014771smarca4a10081.894ENSSMAG00000014082-9682.090Scophthalmus_maximus
ENSCSEG00000014771smarca4a9992.604ENSSMAG00000003200smarca4a9693.640Scophthalmus_maximus
ENSCSEG00000014771smarca4a10089.756ENSSDUG00000017298smarca4a9688.559Seriola_dumerili
ENSCSEG00000014771smarca4a9985.028ENSSDUG00000005388-9583.301Seriola_dumerili
ENSCSEG00000014771smarca4a10095.076ENSSLDG00000024486smarca4a10095.076Seriola_lalandi_dorsalis
ENSCSEG00000014771smarca4a6196.894ENSSARG00000013477SMARCA48196.894Sorex_araneus
ENSCSEG00000014771smarca4a9583.642ENSSPUG00000004558SMARCA49483.212Sphenodon_punctatus
ENSCSEG00000014771smarca4a10094.103ENSSPAG00000004248smarca4a9693.447Stegastes_partitus
ENSCSEG00000014771smarca4a10083.106ENSSPAG00000012533-9682.502Stegastes_partitus
ENSCSEG00000014771smarca4a10087.287ENSSSCG00000013629SMARCA49686.885Sus_scrofa
ENSCSEG00000014771smarca4a5284.223ENSTGUG00000015488-9884.091Taeniopygia_guttata
ENSCSEG00000014771smarca4a9582.675ENSTRUG00000001378SMARCA49483.101Takifugu_rubripes
ENSCSEG00000014771smarca4a9087.004ENSTRUG00000004885smarca4a9686.396Takifugu_rubripes
ENSCSEG00000014771smarca4a7492.171ENSTNIG00000004859-10092.171Tetraodon_nigroviridis
ENSCSEG00000014771smarca4a10081.857ENSTNIG00000004536SMARCA49682.647Tetraodon_nigroviridis
ENSCSEG00000014771smarca4a10084.510ENSTTRG00000009519SMARCA49683.519Tursiops_truncatus
ENSCSEG00000014771smarca4a10087.081ENSUAMG00000014661SMARCA49686.860Ursus_americanus
ENSCSEG00000014771smarca4a9583.012ENSUMAG00000022005SMARCA49890.751Ursus_maritimus
ENSCSEG00000014771smarca4a9985.385ENSVVUG00000017820SMARCA49486.860Vulpes_vulpes
ENSCSEG00000014771smarca4a10081.993ENSXETG00000009355smarca49781.032Xenopus_tropicalis
ENSCSEG00000014771smarca4a9981.366ENSXCOG00000013494-9582.012Xiphophorus_couchianus
ENSCSEG00000014771smarca4a10091.352ENSXMAG00000006321smarca4a9691.414Xiphophorus_maculatus
ENSCSEG00000014771smarca4a10084.046ENSXMAG00000007030-9784.270Xiphophorus_maculatus

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