EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000014861 (Gene tree)
Gene ID: 103377134
Gene Symbol: ythdf3
Alias: wu:fi35c09|zgc:55441
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 11131 bases
Position: chr3:9190927-9202057
Accession: 103377134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000023343	YTH	PF04146.15	5.6e-39	1	1
ENSCSEP00000023299	YTH	PF04146.15	7e-39	1	1
ENSCSEP00000023304	YTH	PF04146.15	7.1e-39	1	1
ENSCSEP00000023291	YTH	PF04146.15	7.5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000023650	-	1644	-	ENSCSEP00000023343	547 (aa)	-	-
ENSCSET00000023598	-	5535	XM_008307794	ENSCSEP00000023291	614 (aa)	XP_008306016	UPI000D62315C
ENSCSET00000023611	-	5733	XM_008307793	ENSCSEP00000023304	603 (aa)	XP_008306015	UPI0004977E57
ENSCSET00000023606	-	5478	XM_008307795	ENSCSEP00000023299	595 (aa)	XP_008306017	UPI000497B3C9

Gene Model

Click here to download ENSCSEG00000014861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000014861	ythdf3	93	61.770	ENSCSEG00000020623	YTHDF1	97	62.202
ENSCSEG00000014861	ythdf3	97	62.923	ENSCSEG00000002716	ythdf2	99	64.580

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014861	ythdf3	99	96.026	ENSAPOG00000024006	ythdf3	100	96.026	Acanthochromis_polyacanthus
ENSCSEG00000014861	ythdf3	99	91.877	ENSACIG00000022287	ythdf3	99	92.780	Amphilophus_citrinellus
ENSCSEG00000014861	ythdf3	99	96.026	ENSAOCG00000000723	ythdf3	100	96.026	Amphiprion_ocellaris
ENSCSEG00000014861	ythdf3	99	93.377	ENSAPEG00000020352	ythdf3	100	94.868	Amphiprion_percula
ENSCSEG00000014861	ythdf3	99	96.147	ENSATEG00000011478	ythdf3	97	98.974	Anabas_testudineus
ENSCSEG00000014861	ythdf3	98	87.102	ENSACLG00000026145	ythdf3	99	93.904	Astatotilapia_calliptera
ENSCSEG00000014861	ythdf3	97	82.332	ENSAMXG00000030366	ythdf3	100	84.541	Astyanax_mexicanus
ENSCSEG00000014861	ythdf3	100	74.579	ENSCGRG00000005613	-	100	77.108	Cricetulus_griseus_crigri
ENSCSEG00000014861	ythdf3	65	55.733	ENSCGRG00000008289	-	100	56.233	Cricetulus_griseus_crigri
ENSCSEG00000014861	ythdf3	99	89.901	ENSCVAG00000018114	ythdf3	100	89.744	Cyprinodon_variegatus
ENSCSEG00000014861	ythdf3	99	81.566	ENSDARG00000057939	ythdf3	100	83.470	Danio_rerio
ENSCSEG00000014861	ythdf3	99	83.306	ENSELUG00000014824	ythdf3	100	83.279	Esox_lucius
ENSCSEG00000014861	ythdf3	98	73.010	ENSFALG00000005503	YTHDF3	100	77.840	Ficedula_albicollis
ENSCSEG00000014861	ythdf3	99	91.225	ENSFHEG00000016395	ythdf3	100	91.938	Fundulus_heteroclitus
ENSCSEG00000014861	ythdf3	99	81.190	ENSGMOG00000014950	ythdf3	100	81.672	Gadus_morhua
ENSCSEG00000014861	ythdf3	97	67.327	ENSGALG00000039774	YTHDF3	100	77.721	Gallus_gallus
ENSCSEG00000014861	ythdf3	99	90.728	ENSGAFG00000006529	ythdf3	100	91.391	Gambusia_affinis
ENSCSEG00000014861	ythdf3	99	91.584	ENSGACG00000002998	ythdf3	99	92.346	Gasterosteus_aculeatus
ENSCSEG00000014861	ythdf3	98	89.502	ENSHBUG00000018631	ythdf3	99	93.103	Haplochromis_burtoni
ENSCSEG00000014861	ythdf3	99	85.329	ENSHCOG00000015277	ythdf3	99	84.193	Hippocampus_comes
ENSCSEG00000014861	ythdf3	99	80.098	ENSIPUG00000014157	YTHDF1	100	82.899	Ictalurus_punctatus
ENSCSEG00000014861	ythdf3	99	92.079	ENSKMAG00000008447	ythdf3	100	92.079	Kryptolebias_marmoratus
ENSCSEG00000014861	ythdf3	100	91.304	ENSLBEG00000017003	ythdf3	100	91.055	Labrus_bergylta
ENSCSEG00000014861	ythdf3	98	88.640	ENSMAMG00000000414	ythdf3	100	86.224	Mastacembelus_armatus
ENSCSEG00000014861	ythdf3	98	89.502	ENSMZEG00005021836	ythdf3	99	95.025	Maylandia_zebra
ENSCSEG00000014861	ythdf3	64	73.822	ENSMAUG00000012560	Ythdf3	99	72.703	Mesocricetus_auratus
ENSCSEG00000014861	ythdf3	65	55.980	ENSMICG00000009379	-	100	56.818	Microcebus_murinus
ENSCSEG00000014861	ythdf3	96	84.486	ENSMMOG00000003402	ythdf3	98	83.364	Mola_mola
ENSCSEG00000014861	ythdf3	99	92.550	ENSMALG00000000147	ythdf3	100	94.205	Monopterus_albus
ENSCSEG00000014861	ythdf3	99	85.609	ENSNBRG00000023433	ythdf3	99	93.322	Neolamprologus_brichardi
ENSCSEG00000014861	ythdf3	54	80.405	ENSNLEG00000003872	YTHDF3	100	76.740	Nomascus_leucogenys
ENSCSEG00000014861	ythdf3	98	87.563	ENSONIG00000014175	ythdf3	99	94.545	Oreochromis_niloticus
ENSCSEG00000014861	ythdf3	99	75.453	ENSOANG00000005053	YTHDF3	100	77.645	Ornithorhynchus_anatinus
ENSCSEG00000014861	ythdf3	99	90.728	ENSORLG00000008640	ythdf3	100	91.391	Oryzias_latipes
ENSCSEG00000014861	ythdf3	99	90.563	ENSORLG00020014684	ythdf3	100	91.225	Oryzias_latipes_hni
ENSCSEG00000014861	ythdf3	99	90.728	ENSORLG00015014880	ythdf3	100	91.391	Oryzias_latipes_hsok
ENSCSEG00000014861	ythdf3	99	90.397	ENSOMEG00000008212	ythdf3	100	91.060	Oryzias_melastigma
ENSCSEG00000014861	ythdf3	99	82.401	ENSPKIG00000008298	ythdf3	100	84.740	Paramormyrops_kingsleyae
ENSCSEG00000014861	ythdf3	99	88.462	ENSPMGG00000023791	ythdf3	97	95.890	Periophthalmus_magnuspinnatus
ENSCSEG00000014861	ythdf3	99	91.391	ENSPFOG00000006082	ythdf3	100	91.887	Poecilia_formosa
ENSCSEG00000014861	ythdf3	99	91.556	ENSPLAG00000006902	ythdf3	100	92.053	Poecilia_latipinna
ENSCSEG00000014861	ythdf3	99	91.391	ENSPMEG00000012922	ythdf3	100	91.887	Poecilia_mexicana
ENSCSEG00000014861	ythdf3	99	91.240	ENSPREG00000019781	ythdf3	100	91.405	Poecilia_reticulata
ENSCSEG00000014861	ythdf3	99	57.191	ENSPPYG00000018626	YTHDF3	99	60.103	Pongo_abelii
ENSCSEG00000014861	ythdf3	87	93.617	ENSPVAG00000002740	YTHDF3	85	93.617	Pteropus_vampyrus
ENSCSEG00000014861	ythdf3	98	86.704	ENSPNYG00000002949	ythdf3	99	97.285	Pundamilia_nyererei
ENSCSEG00000014861	ythdf3	95	79.541	ENSSFOG00015015445	ythdf3	97	84.232	Scleropages_formosus
ENSCSEG00000014861	ythdf3	99	91.261	ENSSMAG00000014999	ythdf3	100	92.724	Scophthalmus_maximus
ENSCSEG00000014861	ythdf3	99	96.358	ENSSDUG00000014403	ythdf3	100	96.358	Seriola_dumerili
ENSCSEG00000014861	ythdf3	99	96.358	ENSSLDG00000005029	ythdf3	100	96.358	Seriola_lalandi_dorsalis
ENSCSEG00000014861	ythdf3	98	89.777	ENSSPAG00000001269	ythdf3	100	92.751	Stegastes_partitus
ENSCSEG00000014861	ythdf3	98	73.473	ENSTGUG00000011243	YTHDF3	100	78.571	Taeniopygia_guttata
ENSCSEG00000014861	ythdf3	99	90.099	ENSTRUG00000007870	ythdf3	100	90.759	Takifugu_rubripes
ENSCSEG00000014861	ythdf3	99	88.245	ENSTNIG00000012698	ythdf3	100	86.557	Tetraodon_nigroviridis
ENSCSEG00000014861	ythdf3	98	73.171	ENSTTRG00000014564	YTHDF3	99	74.609	Tursiops_truncatus
ENSCSEG00000014861	ythdf3	86	86.900	ENSVPAG00000008104	YTHDF3	87	88.525	Vicugna_pacos
ENSCSEG00000014861	ythdf3	99	76.990	ENSXETG00000021659	ythdf3	100	76.990	Xenopus_tropicalis
ENSCSEG00000014861	ythdf3	99	87.587	ENSXCOG00000009687	ythdf3	100	86.899	Xiphophorus_couchianus
ENSCSEG00000014861	ythdf3	99	90.728	ENSXMAG00000009698	ythdf3	100	91.225	Xiphophorus_maculatus