EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000014892 (Gene tree)
Gene ID: 103394285
Gene Symbol: -
Alias: -
Full Name: transcriptional repressor scratch 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 9856 bases
Position: chr18:9049066-9058921
Accession: 103394285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000023345	zf-C2H2	PF00096.26	2.1e-25	1	4
ENSCSEP00000023345	zf-C2H2	PF00096.26	2.1e-25	2	4
ENSCSEP00000023345	zf-C2H2	PF00096.26	2.1e-25	3	4
ENSCSEP00000023345	zf-C2H2	PF00096.26	2.1e-25	4	4
ENSCSEP00000023345	zf-met	PF12874.7	8.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000023652	-	4823	XM_008331522	ENSCSEP00000023345	299 (aa)	XP_008329744	UPI000496D73E

Gene Model

Click here to download ENSCSEG00000014892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000014892	-	62	37.179	ENSCSEG00000004348	-	85	37.179
ENSCSEG00000014892	-	68	41.176	ENSCSEG00000020730	-	81	41.304
ENSCSEG00000014892	-	62	40.196	ENSCSEG00000013879	znf319b	61	40.196
ENSCSEG00000014892	-	97	60.443	ENSCSEG00000021542	scrt2	97	60.443
ENSCSEG00000014892	-	50	46.512	ENSCSEG00000000356	znf648	98	46.512
ENSCSEG00000014892	-	73	40.876	ENSCSEG00000008502	-	72	40.876
ENSCSEG00000014892	-	60	41.250	ENSCSEG00000005491	-	60	41.250
ENSCSEG00000014892	-	99	73.913	ENSCSEG00000008596	scrt1b	99	75.503
ENSCSEG00000014892	-	57	38.346	ENSCSEG00000004721	-	61	38.346
ENSCSEG00000014892	-	58	46.154	ENSCSEG00000005935	ZNF319	61	46.154
ENSCSEG00000014892	-	71	45.205	ENSCSEG00000003757	-	96	44.595
ENSCSEG00000014892	-	67	38.636	ENSCSEG00000008903	-	72	38.636
ENSCSEG00000014892	-	53	38.806	ENSCSEG00000013398	-	81	38.806
ENSCSEG00000014892	-	64	35.385	ENSCSEG00000001748	-	98	35.385
ENSCSEG00000014892	-	55	38.739	ENSCSEG00000005983	-	91	38.739
ENSCSEG00000014892	-	64	35.955	ENSCSEG00000020696	-	91	40.000
ENSCSEG00000014892	-	52	45.833	ENSCSEG00000019029	-	94	45.833
ENSCSEG00000014892	-	52	34.400	ENSCSEG00000005974	-	83	34.400
ENSCSEG00000014892	-	55	46.667	ENSCSEG00000011586	znf236	70	46.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014892	-	100	87.291	ENSAPOG00000015197	-	100	87.291	Acanthochromis_polyacanthus
ENSCSEG00000014892	-	97	62.671	ENSAPOG00000003680	scrt2	96	62.671	Acanthochromis_polyacanthus
ENSCSEG00000014892	-	98	76.768	ENSAPOG00000009279	scrt1b	98	76.768	Acanthochromis_polyacanthus
ENSCSEG00000014892	-	97	54.286	ENSACIG00000001296	-	96	54.286	Amphilophus_citrinellus
ENSCSEG00000014892	-	100	92.308	ENSACIG00000006586	-	100	92.308	Amphilophus_citrinellus
ENSCSEG00000014892	-	98	75.338	ENSACIG00000013613	scrt1b	98	75.338	Amphilophus_citrinellus
ENSCSEG00000014892	-	97	60.870	ENSACIG00000012604	scrt2	96	60.870	Amphilophus_citrinellus
ENSCSEG00000014892	-	97	62.671	ENSAOCG00000021557	scrt2	96	62.671	Amphiprion_ocellaris
ENSCSEG00000014892	-	98	76.768	ENSAOCG00000003910	scrt1b	98	76.768	Amphiprion_ocellaris
ENSCSEG00000014892	-	100	93.311	ENSAOCG00000023304	-	100	93.311	Amphiprion_ocellaris
ENSCSEG00000014892	-	98	76.431	ENSAPEG00000000869	scrt1b	98	76.431	Amphiprion_percula
ENSCSEG00000014892	-	100	93.311	ENSAPEG00000005677	-	100	93.311	Amphiprion_percula
ENSCSEG00000014892	-	97	62.671	ENSAPEG00000022558	scrt2	96	62.671	Amphiprion_percula
ENSCSEG00000014892	-	100	84.615	ENSATEG00000011660	-	100	84.615	Anabas_testudineus
ENSCSEG00000014892	-	99	75.421	ENSATEG00000002302	scrt1b	99	76.510	Anabas_testudineus
ENSCSEG00000014892	-	97	53.211	ENSATEG00000003195	-	97	53.211	Anabas_testudineus
ENSCSEG00000014892	-	97	59.627	ENSATEG00000023998	scrt2	97	59.627	Anabas_testudineus
ENSCSEG00000014892	-	68	78.922	ENSACAG00000016109	SCRT2	91	78.922	Anolis_carolinensis
ENSCSEG00000014892	-	98	76.094	ENSACLG00000007162	scrt1b	98	76.094	Astatotilapia_calliptera
ENSCSEG00000014892	-	100	89.439	ENSACLG00000012046	-	100	89.439	Astatotilapia_calliptera
ENSCSEG00000014892	-	99	73.154	ENSAMXG00000042624	SCRT1	100	73.154	Astyanax_mexicanus
ENSCSEG00000014892	-	99	79.461	ENSAMXG00000038085	scrt1a	99	79.461	Astyanax_mexicanus
ENSCSEG00000014892	-	83	67.600	ENSAMXG00000034158	scrt2	87	67.600	Astyanax_mexicanus
ENSCSEG00000014892	-	55	60.123	WBGene00000468	ces-1	79	47.807	Caenorhabditis_elegans
ENSCSEG00000014892	-	87	56.554	ENSCPBG00000027613	SCRT2	100	56.554	Chrysemys_picta_bellii
ENSCSEG00000014892	-	99	75.676	ENSCPBG00000018899	SCRT1	99	75.676	Chrysemys_picta_bellii
ENSCSEG00000014892	-	97	59.190	ENSCVAG00000021038	scrt2	97	59.190	Cyprinodon_variegatus
ENSCSEG00000014892	-	98	76.094	ENSCVAG00000009561	scrt1b	98	76.094	Cyprinodon_variegatus
ENSCSEG00000014892	-	100	91.639	ENSCVAG00000003190	-	100	91.639	Cyprinodon_variegatus
ENSCSEG00000014892	-	99	78.041	ENSDARG00000100821	scrt1a	99	78.041	Danio_rerio
ENSCSEG00000014892	-	99	75.758	ENSDARG00000040214	scrt1b	99	75.758	Danio_rerio
ENSCSEG00000014892	-	99	78.041	ENSELUG00000005435	scrt1b	98	78.041	Esox_lucius
ENSCSEG00000014892	-	99	76.431	ENSELUG00000022228	scrt1a	99	76.431	Esox_lucius
ENSCSEG00000014892	-	96	60.323	ENSELUG00000023883	scrt2	96	60.062	Esox_lucius
ENSCSEG00000014892	-	67	78.000	ENSFALG00000005718	SCRT2	83	79.000	Ficedula_albicollis
ENSCSEG00000014892	-	77	64.935	ENSFDAG00000008733	SCRT1	96	64.935	Fukomys_damarensis
ENSCSEG00000014892	-	100	92.308	ENSFHEG00000009794	-	100	92.308	Fundulus_heteroclitus
ENSCSEG00000014892	-	98	76.094	ENSFHEG00000014820	scrt1b	98	76.094	Fundulus_heteroclitus
ENSCSEG00000014892	-	97	63.481	ENSFHEG00000005732	scrt2	96	63.481	Fundulus_heteroclitus
ENSCSEG00000014892	-	56	96.032	ENSGMOG00000013833	-	56	96.032	Gadus_morhua
ENSCSEG00000014892	-	97	55.031	ENSGMOG00000019519	scrt2	96	55.031	Gadus_morhua
ENSCSEG00000014892	-	98	75.084	ENSGMOG00000000629	scrt1b	99	75.084	Gadus_morhua
ENSCSEG00000014892	-	97	61.034	ENSGALG00000028912	SCRT2	97	61.379	Gallus_gallus
ENSCSEG00000014892	-	100	82.274	ENSGAFG00000009650	-	100	82.274	Gambusia_affinis
ENSCSEG00000014892	-	98	76.768	ENSGAFG00000007636	scrt1b	98	76.768	Gambusia_affinis
ENSCSEG00000014892	-	97	61.489	ENSGAFG00000003093	scrt2	97	61.489	Gambusia_affinis
ENSCSEG00000014892	-	98	73.898	ENSGACG00000008982	scrt1b	98	73.898	Gasterosteus_aculeatus
ENSCSEG00000014892	-	100	88.629	ENSGACG00000004072	-	100	88.629	Gasterosteus_aculeatus
ENSCSEG00000014892	-	96	60.417	ENSGAGG00000020761	SCRT2	96	60.764	Gopherus_agassizii
ENSCSEG00000014892	-	59	80.791	ENSGAGG00000020760	-	68	81.921	Gopherus_agassizii
ENSCSEG00000014892	-	99	75.676	ENSGAGG00000011736	SCRT1	99	75.676	Gopherus_agassizii
ENSCSEG00000014892	-	97	62.671	ENSHBUG00000012492	scrt2	96	62.671	Haplochromis_burtoni
ENSCSEG00000014892	-	98	76.094	ENSHBUG00000016621	scrt1b	98	76.094	Haplochromis_burtoni
ENSCSEG00000014892	-	100	92.308	ENSHBUG00000019101	-	100	92.308	Haplochromis_burtoni
ENSCSEG00000014892	-	98	77.104	ENSHCOG00000016704	scrt1b	98	77.104	Hippocampus_comes
ENSCSEG00000014892	-	100	73.770	ENSHCOG00000016179	-	100	73.770	Hippocampus_comes
ENSCSEG00000014892	-	97	59.295	ENSHCOG00000008116	scrt2	97	59.295	Hippocampus_comes
ENSCSEG00000014892	-	98	76.610	ENSIPUG00000004551	scrt1a	99	76.610	Ictalurus_punctatus
ENSCSEG00000014892	-	99	70.608	ENSIPUG00000005547	-	100	70.608	Ictalurus_punctatus
ENSCSEG00000014892	-	100	91.694	ENSKMAG00000009489	-	100	91.694	Kryptolebias_marmoratus
ENSCSEG00000014892	-	98	76.094	ENSKMAG00000005484	scrt1b	98	76.094	Kryptolebias_marmoratus
ENSCSEG00000014892	-	97	59.561	ENSKMAG00000018087	scrt2	97	59.561	Kryptolebias_marmoratus
ENSCSEG00000014892	-	100	91.304	ENSLBEG00000023388	-	100	91.304	Labrus_bergylta
ENSCSEG00000014892	-	97	59.133	ENSLBEG00000015419	scrt2	97	58.824	Labrus_bergylta
ENSCSEG00000014892	-	99	74.662	ENSLACG00000003588	SCRT1	98	74.662	Latimeria_chalumnae
ENSCSEG00000014892	-	97	52.941	ENSLOCG00000002246	scrt2	97	53.211	Lepisosteus_oculatus
ENSCSEG00000014892	-	99	77.703	ENSLOCG00000007573	scrt1b	99	77.703	Lepisosteus_oculatus
ENSCSEG00000014892	-	96	92.593	ENSMFAG00000035496	SCRT1	92	89.655	Macaca_fascicularis
ENSCSEG00000014892	-	98	75.676	ENSMAMG00000011698	scrt1b	98	76.768	Mastacembelus_armatus
ENSCSEG00000014892	-	97	59.317	ENSMAMG00000001291	scrt2	97	59.317	Mastacembelus_armatus
ENSCSEG00000014892	-	100	92.308	ENSMZEG00005026702	-	100	92.308	Maylandia_zebra
ENSCSEG00000014892	-	97	62.671	ENSMZEG00005026445	scrt2	96	62.671	Maylandia_zebra
ENSCSEG00000014892	-	98	76.094	ENSMZEG00005005627	scrt1b	98	76.094	Maylandia_zebra
ENSCSEG00000014892	-	65	80.829	ENSMGAG00000016579	SCRT2	80	80.829	Meleagris_gallopavo
ENSCSEG00000014892	-	100	91.333	ENSMMOG00000018345	-	100	91.333	Mola_mola
ENSCSEG00000014892	-	98	74.747	ENSMMOG00000003327	scrt1b	98	74.747	Mola_mola
ENSCSEG00000014892	-	97	59.875	ENSMMOG00000009272	scrt2	97	60.188	Mola_mola
ENSCSEG00000014892	-	98	76.351	ENSMALG00000012704	scrt1b	98	77.441	Monopterus_albus
ENSCSEG00000014892	-	97	60.396	ENSMALG00000013656	scrt2	96	60.396	Monopterus_albus
ENSCSEG00000014892	-	60	69.730	ENSNGAG00000020815	Scrt2	91	68.947	Nannospalax_galili
ENSCSEG00000014892	-	100	92.642	ENSNBRG00000014882	-	100	92.642	Neolamprologus_brichardi
ENSCSEG00000014892	-	98	73.179	ENSNBRG00000013983	scrt1b	98	73.179	Neolamprologus_brichardi
ENSCSEG00000014892	-	97	62.329	ENSNBRG00000007221	scrt2	96	62.329	Neolamprologus_brichardi
ENSCSEG00000014892	-	97	57.045	ENSONIG00000003152	-	96	57.045	Oreochromis_niloticus
ENSCSEG00000014892	-	97	59.190	ENSONIG00000016758	scrt2	97	59.190	Oreochromis_niloticus
ENSCSEG00000014892	-	98	76.094	ENSONIG00000006007	scrt1b	98	76.094	Oreochromis_niloticus
ENSCSEG00000014892	-	97	88.197	ENSONIG00000019809	-	100	88.197	Oreochromis_niloticus
ENSCSEG00000014892	-	98	75.338	ENSORLG00000025651	scrt1b	98	76.094	Oryzias_latipes
ENSCSEG00000014892	-	100	87.129	ENSORLG00000022825	-	100	87.129	Oryzias_latipes
ENSCSEG00000014892	-	97	59.813	ENSORLG00000024051	scrt2	97	59.813	Oryzias_latipes
ENSCSEG00000014892	-	98	75.338	ENSORLG00020012967	scrt1b	98	76.094	Oryzias_latipes_hni
ENSCSEG00000014892	-	97	59.813	ENSORLG00020011478	scrt2	97	59.813	Oryzias_latipes_hni
ENSCSEG00000014892	-	97	59.813	ENSORLG00015005524	scrt2	97	59.813	Oryzias_latipes_hsok
ENSCSEG00000014892	-	98	75.338	ENSORLG00015019165	scrt1b	98	76.094	Oryzias_latipes_hsok
ENSCSEG00000014892	-	100	87.129	ENSORLG00015010104	-	100	87.129	Oryzias_latipes_hsok
ENSCSEG00000014892	-	100	90.970	ENSOMEG00000000286	-	100	90.970	Oryzias_melastigma
ENSCSEG00000014892	-	97	60.125	ENSOMEG00000002661	scrt2	97	60.125	Oryzias_melastigma
ENSCSEG00000014892	-	98	75.338	ENSOMEG00000003925	scrt1b	98	76.094	Oryzias_melastigma
ENSCSEG00000014892	-	99	76.689	ENSPKIG00000020085	scrt1a	99	76.689	Paramormyrops_kingsleyae
ENSCSEG00000014892	-	99	76.014	ENSPKIG00000022303	SCRT1	99	76.014	Paramormyrops_kingsleyae
ENSCSEG00000014892	-	100	86.957	ENSPMGG00000021402	-	100	86.957	Periophthalmus_magnuspinnatus
ENSCSEG00000014892	-	97	64.286	ENSPMGG00000016561	scrt2	96	64.286	Periophthalmus_magnuspinnatus
ENSCSEG00000014892	-	98	73.311	ENSPMGG00000002260	scrt1b	98	73.311	Periophthalmus_magnuspinnatus
ENSCSEG00000014892	-	98	76.768	ENSPFOG00000017719	scrt1b	98	76.768	Poecilia_formosa
ENSCSEG00000014892	-	97	59.502	ENSPFOG00000007738	scrt2	97	59.502	Poecilia_formosa
ENSCSEG00000014892	-	100	91.973	ENSPFOG00000005616	-	100	91.973	Poecilia_formosa
ENSCSEG00000014892	-	98	76.768	ENSPLAG00000009876	scrt1b	98	76.768	Poecilia_latipinna
ENSCSEG00000014892	-	100	91.973	ENSPLAG00000011718	-	100	91.973	Poecilia_latipinna
ENSCSEG00000014892	-	97	64.041	ENSPLAG00000005765	scrt2	96	64.041	Poecilia_latipinna
ENSCSEG00000014892	-	100	91.973	ENSPMEG00000011706	-	100	91.973	Poecilia_mexicana
ENSCSEG00000014892	-	98	76.768	ENSPMEG00000013274	scrt1b	98	76.768	Poecilia_mexicana
ENSCSEG00000014892	-	97	64.041	ENSPMEG00000001538	scrt2	96	64.041	Poecilia_mexicana
ENSCSEG00000014892	-	98	76.768	ENSPREG00000018985	scrt1b	98	76.768	Poecilia_reticulata
ENSCSEG00000014892	-	100	91.304	ENSPREG00000012166	-	100	91.304	Poecilia_reticulata
ENSCSEG00000014892	-	97	59.502	ENSPREG00000001147	scrt2	97	59.502	Poecilia_reticulata
ENSCSEG00000014892	-	97	62.671	ENSPNYG00000013109	scrt2	96	62.671	Pundamilia_nyererei
ENSCSEG00000014892	-	100	91.973	ENSPNYG00000008865	-	100	91.973	Pundamilia_nyererei
ENSCSEG00000014892	-	98	76.094	ENSPNYG00000017733	scrt1b	98	76.094	Pundamilia_nyererei
ENSCSEG00000014892	-	98	78.644	ENSPNAG00000017415	scrt1a	98	78.644	Pygocentrus_nattereri
ENSCSEG00000014892	-	99	72.635	ENSPNAG00000027880	-	100	72.973	Pygocentrus_nattereri
ENSCSEG00000014892	-	98	76.949	ENSSFOG00015001195	SCRT1	98	76.949	Scleropages_formosus
ENSCSEG00000014892	-	100	89.439	ENSSMAG00000005122	-	100	89.439	Scophthalmus_maximus
ENSCSEG00000014892	-	100	75.748	ENSSMAG00000019207	scrt1b	100	75.748	Scophthalmus_maximus
ENSCSEG00000014892	-	100	93.645	ENSSDUG00000013215	-	100	93.645	Seriola_dumerili
ENSCSEG00000014892	-	98	76.768	ENSSDUG00000007752	scrt1b	98	76.768	Seriola_dumerili
ENSCSEG00000014892	-	98	59.375	ENSSDUG00000001637	scrt2	96	58.750	Seriola_dumerili
ENSCSEG00000014892	-	97	59.317	ENSSLDG00000013565	scrt2	97	58.696	Seriola_lalandi_dorsalis
ENSCSEG00000014892	-	98	76.768	ENSSLDG00000017166	scrt1b	98	76.768	Seriola_lalandi_dorsalis
ENSCSEG00000014892	-	100	93.645	ENSSLDG00000016454	-	100	93.645	Seriola_lalandi_dorsalis
ENSCSEG00000014892	-	97	62.543	ENSSPUG00000018637	SCRT2	97	62.543	Sphenodon_punctatus
ENSCSEG00000014892	-	98	76.768	ENSSPAG00000002200	scrt1b	98	76.768	Stegastes_partitus
ENSCSEG00000014892	-	100	93.311	ENSSPAG00000006788	-	100	93.311	Stegastes_partitus
ENSCSEG00000014892	-	97	63.014	ENSSPAG00000014018	scrt2	96	63.014	Stegastes_partitus
ENSCSEG00000014892	-	67	77.889	ENSTGUG00000006801	SCRT2	86	78.894	Taeniopygia_guttata
ENSCSEG00000014892	-	97	60.510	ENSTRUG00000007620	scrt2	97	60.510	Takifugu_rubripes
ENSCSEG00000014892	-	86	81.783	ENSTRUG00000019558	-	82	82.558	Takifugu_rubripes
ENSCSEG00000014892	-	98	75.421	ENSTRUG00000011637	scrt1b	99	75.421	Takifugu_rubripes
ENSCSEG00000014892	-	100	88.963	ENSTRUG00000012719	-	100	89.632	Takifugu_rubripes
ENSCSEG00000014892	-	98	75.421	ENSTNIG00000018384	scrt1b	98	75.421	Tetraodon_nigroviridis
ENSCSEG00000014892	-	97	63.729	ENSTNIG00000012473	scrt2	97	63.729	Tetraodon_nigroviridis
ENSCSEG00000014892	-	98	77.104	ENSXCOG00000019675	scrt1b	98	77.104	Xiphophorus_couchianus
ENSCSEG00000014892	-	97	61.489	ENSXCOG00000014367	scrt2	97	61.489	Xiphophorus_couchianus
ENSCSEG00000014892	-	100	82.274	ENSXCOG00000019861	-	100	82.274	Xiphophorus_couchianus
ENSCSEG00000014892	-	98	77.104	ENSXMAG00000027885	scrt1b	98	77.104	Xiphophorus_maculatus
ENSCSEG00000014892	-	97	59.502	ENSXMAG00000028567	scrt2	97	59.502	Xiphophorus_maculatus
ENSCSEG00000014892	-	100	91.973	ENSXMAG00000015353	-	100	91.973	Xiphophorus_maculatus