EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000014910 (Gene tree)
Gene ID: 103394852
Gene Symbol: rbm27
Alias: si:dkey-149g3.2
Full Name: RNA binding motif protein 27
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 12731 bases
Position: chr19:2549403-2562133
Accession: 103394852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000023442	RRM_1	PF00076.22	4.9e-08	1	1
ENSCSEP00000023415	RRM_1	PF00076.22	5.7e-08	1	1
ENSCSEP00000023442	PWI	PF01480.17	1.9e-08	1	1
ENSCSEP00000023415	PWI	PF01480.17	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000023723	-	6326	XM_008332302	ENSCSEP00000023415	1048 (aa)	XP_008330524	UPI0004964B0D
ENSCSET00000023750	-	2997	-	ENSCSEP00000023442	998 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000014910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014910's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000014910	rbm27	64	59.167	ENSCSEG00000016514	rbm26	66	67.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014910	rbm27	100	44.768	ENSG00000091009	RBM27	54	50.235	Homo_sapiens
ENSCSEG00000014910	rbm27	100	80.997	ENSAPOG00000000301	rbm27	100	80.339	Acanthochromis_polyacanthus
ENSCSEG00000014910	rbm27	87	49.080	ENSAPOG00000014508	rbm26	58	70.652	Acanthochromis_polyacanthus
ENSCSEG00000014910	rbm27	96	75.900	ENSACIG00000014111	rbm27	96	75.977	Amphilophus_citrinellus
ENSCSEG00000014910	rbm27	100	81.185	ENSAOCG00000016767	rbm27	100	80.809	Amphiprion_ocellaris
ENSCSEG00000014910	rbm27	100	81.279	ENSAPEG00000017681	rbm27	100	80.715	Amphiprion_percula
ENSCSEG00000014910	rbm27	100	82.736	ENSATEG00000010385	rbm27	100	82.075	Anabas_testudineus
ENSCSEG00000014910	rbm27	55	50.353	ENSAPLG00000009309	-	61	74.390	Anas_platyrhynchos
ENSCSEG00000014910	rbm27	59	41.167	ENSAPLG00000011536	RBM26	72	40.693	Anas_platyrhynchos
ENSCSEG00000014910	rbm27	56	51.458	ENSACAG00000014177	-	64	83.871	Anolis_carolinensis
ENSCSEG00000014910	rbm27	100	45.587	ENSANAG00000034039	-	58	51.442	Aotus_nancymaae
ENSCSEG00000014910	rbm27	100	78.389	ENSACLG00000010782	rbm27	100	79.621	Astatotilapia_calliptera
ENSCSEG00000014910	rbm27	100	60.411	ENSAMXG00000029605	rbm27	100	62.043	Astyanax_mexicanus
ENSCSEG00000014910	rbm27	100	45.495	ENSBTAG00000011642	RBM27	58	50.155	Bos_taurus
ENSCSEG00000014910	rbm27	100	46.044	ENSCJAG00000021308	-	63	82.105	Callithrix_jacchus
ENSCSEG00000014910	rbm27	100	44.473	ENSCAFG00000006456	-	54	50.315	Canis_familiaris
ENSCSEG00000014910	rbm27	59	42.536	ENSCAFG00020024152	RBM26	95	39.379	Canis_lupus_dingo
ENSCSEG00000014910	rbm27	98	43.761	ENSCAFG00020024931	-	55	50.394	Canis_lupus_dingo
ENSCSEG00000014910	rbm27	90	43.889	ENSCHIG00000021849	RBM26	77	77.778	Capra_hircus
ENSCSEG00000014910	rbm27	97	38.713	ENSCAPG00000007138	-	66	100.000	Cavia_aperea
ENSCSEG00000014910	rbm27	66	79.487	ENSCPOG00000021081	RBM26	83	77.778	Cavia_porcellus
ENSCSEG00000014910	rbm27	100	43.677	ENSCPOG00000002498	-	54	51.816	Cavia_porcellus
ENSCSEG00000014910	rbm27	98	44.474	ENSCCAG00000015866	-	55	50.549	Cebus_capucinus
ENSCSEG00000014910	rbm27	100	44.308	ENSCATG00000035545	-	56	50.549	Cercocebus_atys
ENSCSEG00000014910	rbm27	100	45.934	ENSCLAG00000016106	-	58	50.623	Chinchilla_lanigera
ENSCSEG00000014910	rbm27	100	44.396	ENSCSAG00000012270	-	64	80.198	Chlorocebus_sabaeus
ENSCSEG00000014910	rbm27	70	77.215	ENSCHOG00000000529	RBM26	64	75.610	Choloepus_hoffmanni
ENSCSEG00000014910	rbm27	55	56.055	ENSCPBG00000008390	-	77	53.374	Chrysemys_picta_bellii
ENSCSEG00000014910	rbm27	50	62.821	ENSCING00000003516	zf(c3h)-9	60	62.821	Ciona_intestinalis
ENSCSEG00000014910	rbm27	100	46.236	ENSCANG00000040932	-	57	50.392	Colobus_angolensis_palliatus
ENSCSEG00000014910	rbm27	100	42.422	ENSCGRG00001018200	Rbm27	60	50.394	Cricetulus_griseus_chok1gshd
ENSCSEG00000014910	rbm27	98	45.902	ENSCGRG00000006403	Rbm27	59	50.156	Cricetulus_griseus_crigri
ENSCSEG00000014910	rbm27	58	42.610	ENSCGRG00000006579	Rbm26	89	46.970	Cricetulus_griseus_crigri
ENSCSEG00000014910	rbm27	86	87.755	ENSCVAG00000014585	rbm27	93	85.294	Cyprinodon_variegatus
ENSCSEG00000014910	rbm27	68	67.000	ENSCVAG00000015295	rbm26	62	67.000	Cyprinodon_variegatus
ENSCSEG00000014910	rbm27	65	65.612	ENSDARG00000060521	rbm27	63	68.336	Danio_rerio
ENSCSEG00000014910	rbm27	58	42.338	ENSDNOG00000004726	RBM26	70	42.766	Dasypus_novemcinctus
ENSCSEG00000014910	rbm27	58	42.320	ENSDORG00000006232	Rbm26	53	44.974	Dipodomys_ordii
ENSCSEG00000014910	rbm27	54	58.824	FBgn0002044	swm	56	57.831	Drosophila_melanogaster
ENSCSEG00000014910	rbm27	56	44.118	ENSEBUG00000003376	rbm26	55	53.030	Eptatretus_burgeri
ENSCSEG00000014910	rbm27	100	43.356	ENSEASG00005020588	-	54	50.392	Equus_asinus_asinus
ENSCSEG00000014910	rbm27	100	44.511	ENSECAG00000000883	-	69	82.796	Equus_caballus
ENSCSEG00000014910	rbm27	88	40.217	ENSEEUG00000012342	RBM26	59	39.666	Erinaceus_europaeus
ENSCSEG00000014910	rbm27	100	44.100	ENSEEUG00000010335	-	62	85.897	Erinaceus_europaeus
ENSCSEG00000014910	rbm27	100	65.270	ENSELUG00000023148	rbm27	100	65.157	Esox_lucius
ENSCSEG00000014910	rbm27	84	76.923	ENSELUG00000003110	rbm26	61	76.923	Esox_lucius
ENSCSEG00000014910	rbm27	100	45.365	ENSFCAG00000005792	-	58	50.000	Felis_catus
ENSCSEG00000014910	rbm27	86	49.577	ENSFALG00000003228	-	61	82.667	Ficedula_albicollis
ENSCSEG00000014910	rbm27	58	42.022	ENSFDAG00000011365	RBM26	53	45.189	Fukomys_damarensis
ENSCSEG00000014910	rbm27	68	48.870	ENSFDAG00000017029	-	58	50.623	Fukomys_damarensis
ENSCSEG00000014910	rbm27	58	41.833	ENSFHEG00000005102	rbm26	52	42.397	Fundulus_heteroclitus
ENSCSEG00000014910	rbm27	100	75.843	ENSFHEG00000010494	rbm27	100	76.146	Fundulus_heteroclitus
ENSCSEG00000014910	rbm27	86	91.176	ENSGMOG00000013610	rbm27	87	91.089	Gadus_morhua
ENSCSEG00000014910	rbm27	54	54.467	ENSGALG00000007516	-	100	49.718	Gallus_gallus
ENSCSEG00000014910	rbm27	88	74.074	ENSGAFG00000011966	rbm26	61	74.074	Gambusia_affinis
ENSCSEG00000014910	rbm27	100	75.541	ENSGAFG00000005005	rbm27	100	75.353	Gambusia_affinis
ENSCSEG00000014910	rbm27	100	70.721	ENSGACG00000020719	rbm27	100	71.171	Gasterosteus_aculeatus
ENSCSEG00000014910	rbm27	54	52.398	ENSGAGG00000002126	-	77	50.123	Gopherus_agassizii
ENSCSEG00000014910	rbm27	100	44.683	ENSGGOG00000013312	-	55	50.078	Gorilla_gorilla
ENSCSEG00000014910	rbm27	100	78.199	ENSHBUG00000003077	rbm27	100	79.431	Haplochromis_burtoni
ENSCSEG00000014910	rbm27	68	49.153	ENSHGLG00000004076	RBM27	58	50.000	Heterocephalus_glaber_female
ENSCSEG00000014910	rbm27	66	47.006	ENSHGLG00100003022	-	59	50.000	Heterocephalus_glaber_male
ENSCSEG00000014910	rbm27	65	72.864	ENSHCOG00000003684	rbm27	100	70.750	Hippocampus_comes
ENSCSEG00000014910	rbm27	72	51.299	ENSIPUG00000004579	rbm26	65	78.205	Ictalurus_punctatus
ENSCSEG00000014910	rbm27	83	84.536	ENSIPUG00000012280	rbm27	100	62.747	Ictalurus_punctatus
ENSCSEG00000014910	rbm27	100	46.154	ENSSTOG00000002378	-	58	50.310	Ictidomys_tridecemlineatus
ENSCSEG00000014910	rbm27	100	43.694	ENSJJAG00000010911	Rbm27	80	95.000	Jaculus_jaculus
ENSCSEG00000014910	rbm27	58	42.006	ENSJJAG00000022458	Rbm26	53	44.463	Jaculus_jaculus
ENSCSEG00000014910	rbm27	100	77.622	ENSKMAG00000009801	rbm27	100	76.873	Kryptolebias_marmoratus
ENSCSEG00000014910	rbm27	100	79.718	ENSLBEG00000025151	rbm27	100	80.657	Labrus_bergylta
ENSCSEG00000014910	rbm27	100	46.632	ENSLACG00000008729	rbm27	65	86.022	Latimeria_chalumnae
ENSCSEG00000014910	rbm27	57	42.453	ENSLACG00000017450	RBM26	91	45.874	Latimeria_chalumnae
ENSCSEG00000014910	rbm27	100	60.531	ENSLOCG00000010426	rbm27	99	62.652	Lepisosteus_oculatus
ENSCSEG00000014910	rbm27	100	45.662	ENSLAFG00000022447	-	56	50.392	Loxodonta_africana
ENSCSEG00000014910	rbm27	58	41.864	ENSLAFG00000010689	RBM26	53	44.634	Loxodonta_africana
ENSCSEG00000014910	rbm27	100	47.016	ENSMFAG00000042337	-	76	46.556	Macaca_fascicularis
ENSCSEG00000014910	rbm27	100	45.470	ENSMMUG00000004476	RBM27	58	53.788	Macaca_mulatta
ENSCSEG00000014910	rbm27	94	41.644	ENSMNEG00000037798	-	63	50.549	Macaca_nemestrina
ENSCSEG00000014910	rbm27	100	44.396	ENSMLEG00000032857	-	56	50.549	Mandrillus_leucophaeus
ENSCSEG00000014910	rbm27	100	74.141	ENSMAMG00000021382	rbm27	100	74.508	Mastacembelus_armatus
ENSCSEG00000014910	rbm27	100	78.294	ENSMZEG00005002635	rbm27	100	79.526	Maylandia_zebra
ENSCSEG00000014910	rbm27	65	76.667	ENSMGAG00000014927	RBM26	64	59.184	Meleagris_gallopavo
ENSCSEG00000014910	rbm27	83	50.714	ENSMGAG00000009467	-	96	55.096	Meleagris_gallopavo
ENSCSEG00000014910	rbm27	100	46.858	ENSMAUG00000007657	Rbm27	58	50.779	Mesocricetus_auratus
ENSCSEG00000014910	rbm27	100	46.774	ENSMOCG00000019479	Rbm27	58	50.467	Microtus_ochrogaster
ENSCSEG00000014910	rbm27	100	71.166	ENSMMOG00000013809	rbm27	100	70.523	Mola_mola
ENSCSEG00000014910	rbm27	58	41.280	ENSMMOG00000018170	rbm26	52	43.585	Mola_mola
ENSCSEG00000014910	rbm27	100	75.996	ENSMALG00000018514	rbm27	100	74.095	Monopterus_albus
ENSCSEG00000014910	rbm27	100	46.320	MGP_CAROLIEiJ_G0022226	Rbm27	58	50.000	Mus_caroli
ENSCSEG00000014910	rbm27	100	45.886	ENSMUSG00000024491	Rbm27	58	50.000	Mus_musculus
ENSCSEG00000014910	rbm27	100	46.257	MGP_PahariEiJ_G0018959	Rbm27	58	49.690	Mus_pahari
ENSCSEG00000014910	rbm27	100	46.422	MGP_SPRETEiJ_G0023136	Rbm27	58	50.000	Mus_spretus
ENSCSEG00000014910	rbm27	66	70.000	ENSMLUG00000003386	RBM26	57	68.493	Myotis_lucifugus
ENSCSEG00000014910	rbm27	100	46.559	ENSNGAG00000016316	Rbm27	58	50.466	Nannospalax_galili
ENSCSEG00000014910	rbm27	100	78.565	ENSNBRG00000005739	rbm27	100	78.942	Neolamprologus_brichardi
ENSCSEG00000014910	rbm27	100	44.396	ENSNLEG00000009886	-	55	51.189	Nomascus_leucogenys
ENSCSEG00000014910	rbm27	71	56.164	ENSMEUG00000004031	-	51	81.522	Notamacropus_eugenii
ENSCSEG00000014910	rbm27	71	82.192	ENSOPRG00000005424	-	66	82.192	Ochotona_princeps
ENSCSEG00000014910	rbm27	94	93.137	ENSONIG00000008506	rbm27	100	80.961	Oreochromis_niloticus
ENSCSEG00000014910	rbm27	63	41.739	ENSOANG00000001531	RBM26	77	68.354	Ornithorhynchus_anatinus
ENSCSEG00000014910	rbm27	59	49.603	ENSOANG00000012563	-	60	51.926	Ornithorhynchus_anatinus
ENSCSEG00000014910	rbm27	100	72.642	ENSORLG00000001645	rbm27	100	78.431	Oryzias_latipes
ENSCSEG00000014910	rbm27	62	40.310	ENSORLG00000004434	rbm26	92	39.264	Oryzias_latipes
ENSCSEG00000014910	rbm27	100	72.830	ENSORLG00020019863	rbm27	100	73.987	Oryzias_latipes_hni
ENSCSEG00000014910	rbm27	100	72.736	ENSORLG00015003753	rbm27	100	78.431	Oryzias_latipes_hsok
ENSCSEG00000014910	rbm27	92	82.075	ENSOMEG00000005785	rbm27	100	76.471	Oryzias_melastigma
ENSCSEG00000014910	rbm27	56	41.993	ENSOGAG00000009171	RBM26	70	42.025	Otolemur_garnettii
ENSCSEG00000014910	rbm27	100	43.382	ENSOGAG00000008758	-	54	50.946	Otolemur_garnettii
ENSCSEG00000014910	rbm27	100	45.770	ENSPPAG00000039646	-	58	50.155	Pan_paniscus
ENSCSEG00000014910	rbm27	100	45.770	ENSPTRG00000017373	-	58	50.155	Pan_troglodytes
ENSCSEG00000014910	rbm27	98	44.658	ENSPANG00000015776	-	56	50.469	Papio_anubis
ENSCSEG00000014910	rbm27	63	61.319	ENSPKIG00000006776	-	100	60.549	Paramormyrops_kingsleyae
ENSCSEG00000014910	rbm27	100	46.445	ENSPKIG00000024548	-	89	51.476	Paramormyrops_kingsleyae
ENSCSEG00000014910	rbm27	58	40.781	ENSPSIG00000007431	RBM26	58	42.492	Pelodiscus_sinensis
ENSCSEG00000014910	rbm27	57	76.047	ENSPMGG00000019541	rbm27	97	69.838	Periophthalmus_magnuspinnatus
ENSCSEG00000014910	rbm27	100	46.505	ENSPEMG00000014312	Rbm27	57	49.844	Peromyscus_maniculatus_bairdii
ENSCSEG00000014910	rbm27	83	50.172	ENSPCIG00000025797	-	66	82.192	Phascolarctos_cinereus
ENSCSEG00000014910	rbm27	75	49.375	ENSPCIG00000014681	RBM26	79	77.778	Phascolarctos_cinereus
ENSCSEG00000014910	rbm27	100	74.930	ENSPFOG00000003105	rbm27	100	75.023	Poecilia_formosa
ENSCSEG00000014910	rbm27	62	74.074	ENSPLAG00000022377	rbm26	59	74.074	Poecilia_latipinna
ENSCSEG00000014910	rbm27	100	74.906	ENSPLAG00000000373	rbm27	100	74.624	Poecilia_latipinna
ENSCSEG00000014910	rbm27	100	74.930	ENSPMEG00000018569	rbm27	100	75.023	Poecilia_mexicana
ENSCSEG00000014910	rbm27	89	63.725	ENSPREG00000021003	rbm26	61	63.107	Poecilia_reticulata
ENSCSEG00000014910	rbm27	82	74.510	ENSPREG00000005827	rbm27	97	74.625	Poecilia_reticulata
ENSCSEG00000014910	rbm27	91	42.834	ENSPPYG00000005430	RBM26	79	77.778	Pongo_abelii
ENSCSEG00000014910	rbm27	100	44.854	ENSPPYG00000015909	-	54	50.392	Pongo_abelii
ENSCSEG00000014910	rbm27	58	42.476	ENSPCOG00000017206	RBM26	69	43.003	Propithecus_coquereli
ENSCSEG00000014910	rbm27	100	77.652	ENSPNYG00000015348	rbm27	100	78.788	Pundamilia_nyererei
ENSCSEG00000014910	rbm27	67	77.778	ENSPNAG00000003024	rbm26	76	77.778	Pygocentrus_nattereri
ENSCSEG00000014910	rbm27	60	64.204	ENSPNAG00000027218	rbm27	100	63.534	Pygocentrus_nattereri
ENSCSEG00000014910	rbm27	100	44.396	ENSRROG00000043836	-	55	50.549	Rhinopithecus_roxellana
ENSCSEG00000014910	rbm27	90	44.875	ENSSBOG00000031813	RBM26	79	77.778	Saimiri_boliviensis_boliviensis
ENSCSEG00000014910	rbm27	98	43.799	ENSSBOG00000034172	-	58	50.311	Saimiri_boliviensis_boliviensis
ENSCSEG00000014910	rbm27	100	58.687	ENSSFOG00015018009	rbm27	100	58.021	Scleropages_formosus
ENSCSEG00000014910	rbm27	95	37.187	ENSSFOG00015005311	rbm26	58	80.769	Scleropages_formosus
ENSCSEG00000014910	rbm27	100	76.995	ENSSMAG00000004138	rbm27	100	76.952	Scophthalmus_maximus
ENSCSEG00000014910	rbm27	100	84.072	ENSSDUG00000021085	rbm27	100	84.543	Seriola_dumerili
ENSCSEG00000014910	rbm27	100	83.412	ENSSLDG00000006922	rbm27	100	83.789	Seriola_lalandi_dorsalis
ENSCSEG00000014910	rbm27	98	42.132	ENSSARG00000000313	-	55	50.625	Sorex_araneus
ENSCSEG00000014910	rbm27	96	44.434	ENSSPUG00000013753	-	85	63.014	Sphenodon_punctatus
ENSCSEG00000014910	rbm27	52	42.724	ENSSPAG00000004632	rbm26	52	43.585	Stegastes_partitus
ENSCSEG00000014910	rbm27	100	73.851	ENSSPAG00000012000	rbm27	100	74.412	Stegastes_partitus
ENSCSEG00000014910	rbm27	59	41.158	ENSTGUG00000012585	RBM26	70	41.009	Taeniopygia_guttata
ENSCSEG00000014910	rbm27	54	51.371	ENSTGUG00000000085	-	77	50.763	Taeniopygia_guttata
ENSCSEG00000014910	rbm27	100	74.620	ENSTRUG00000004518	rbm27	100	74.240	Takifugu_rubripes
ENSCSEG00000014910	rbm27	100	66.094	ENSTNIG00000018215	rbm27	100	65.229	Tetraodon_nigroviridis
ENSCSEG00000014910	rbm27	95	42.272	ENSUMAG00000010569	-	64	51.190	Ursus_maritimus
ENSCSEG00000014910	rbm27	58	42.439	ENSUMAG00000013370	RBM26	70	42.539	Ursus_maritimus
ENSCSEG00000014910	rbm27	69	92.308	ENSVPAG00000000558	-	63	82.796	Vicugna_pacos
ENSCSEG00000014910	rbm27	90	44.167	ENSVVUG00000014196	RBM26	77	77.778	Vulpes_vulpes
ENSCSEG00000014910	rbm27	100	45.471	ENSVVUG00000021131	-	58	49.922	Vulpes_vulpes
ENSCSEG00000014910	rbm27	100	46.636	ENSXETG00000002322	rbm27	58	53.074	Xenopus_tropicalis
ENSCSEG00000014910	rbm27	60	44.753	ENSXETG00000017810	rbm26	88	45.739	Xenopus_tropicalis
ENSCSEG00000014910	rbm27	90	63.725	ENSXCOG00000001827	rbm26	83	74.074	Xiphophorus_couchianus
ENSCSEG00000014910	rbm27	90	74.414	ENSXCOG00000005859	rbm27	91	78.571	Xiphophorus_couchianus
ENSCSEG00000014910	rbm27	100	76.034	ENSXMAG00000001413	rbm27	100	75.752	Xiphophorus_maculatus