EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000014984 (Gene tree)
Gene ID: 103394851
Gene Symbol: larsb
Alias: cb667|lars|wu:fb36b12
Full Name: leucyl-tRNA synthetase
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 19093 bases
Position: chr19:2562243-2581335
Accession: 103394851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000023483	tRNA-synt_1g	PF09334.11	2.3e-17	1	2
ENSCSEP00000023483	tRNA-synt_1g	PF09334.11	2.3e-17	2	2
ENSCSEP00000023541	tRNA-synt_1g	PF09334.11	2.6e-17	1	2
ENSCSEP00000023541	tRNA-synt_1g	PF09334.11	2.6e-17	2	2
ENSCSEP00000023511	tRNA-synt_1g	PF09334.11	2.6e-17	1	2
ENSCSEP00000023511	tRNA-synt_1g	PF09334.11	2.6e-17	2	2
ENSCSEP00000023575	tRNA-synt_1g	PF09334.11	1.1e-06	1	1
ENSCSEP00000023511	Anticodon_1	PF08264.13	2.3e-11	1	1
ENSCSEP00000023541	Anticodon_1	PF08264.13	2.4e-11	1	1
ENSCSEP00000023575	Anticodon_1	PF08264.13	2.4e-11	1	1
ENSCSEP00000023483	tRNA-synt_1	PF00133.22	1e-38	1	2
ENSCSEP00000023483	tRNA-synt_1	PF00133.22	1e-38	2	2
ENSCSEP00000023541	tRNA-synt_1	PF00133.22	1.2e-38	1	2
ENSCSEP00000023541	tRNA-synt_1	PF00133.22	1.2e-38	2	2
ENSCSEP00000023511	tRNA-synt_1	PF00133.22	1.2e-38	1	2
ENSCSEP00000023511	tRNA-synt_1	PF00133.22	1.2e-38	2	2
ENSCSEP00000023575	tRNA-synt_1	PF00133.22	1.4e-31	1	2
ENSCSEP00000023575	tRNA-synt_1	PF00133.22	1.4e-31	2	2
ENSCSEP00000023483	tRNA-synt_1e	PF01406.19	6.6e-07	1	1
ENSCSEP00000023541	tRNA-synt_1e	PF01406.19	7.1e-07	1	1
ENSCSEP00000023511	tRNA-synt_1e	PF01406.19	7.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000023791	-	6167	-	ENSCSEP00000023483	1139 (aa)	-	-
ENSCSET00000023819	-	6542	-	ENSCSEP00000023511	1197 (aa)	-	-
ENSCSET00000023883	-	3462	-	ENSCSEP00000023575	1153 (aa)	-	-
ENSCSET00000023849	-	6509	XM_008332301	ENSCSEP00000023541	1186 (aa)	XP_008330523	UPI000496A56C

Gene Model

Click here to download ENSCSEG00000014984's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000014984's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000014984	larsb	100	77.656	ENSG00000133706	LARS	100	78.603	Homo_sapiens
ENSCSEG00000014984	larsb	100	92.580	ENSAPOG00000010585	larsb	100	92.768	Acanthochromis_polyacanthus
ENSCSEG00000014984	larsb	100	77.367	ENSAMEG00000017584	LARS	100	78.331	Ailuropoda_melanoleuca
ENSCSEG00000014984	larsb	100	90.320	ENSACIG00000014026	larsb	100	90.320	Amphilophus_citrinellus
ENSCSEG00000014984	larsb	100	92.917	ENSAOCG00000016931	larsb	100	93.002	Amphiprion_ocellaris
ENSCSEG00000014984	larsb	100	93.002	ENSAPEG00000017720	larsb	100	93.086	Amphiprion_percula
ENSCSEG00000014984	larsb	100	87.605	ENSATEG00000010441	larsb	99	87.605	Anabas_testudineus
ENSCSEG00000014984	larsb	98	77.836	ENSAPLG00000008145	LARS	100	78.934	Anas_platyrhynchos
ENSCSEG00000014984	larsb	100	76.728	ENSACAG00000013916	LARS	99	77.300	Anolis_carolinensis
ENSCSEG00000014984	larsb	100	69.224	ENSANAG00000014375	LARS	100	69.224	Aotus_nancymaae
ENSCSEG00000014984	larsb	100	91.906	ENSACLG00000010881	larsb	100	91.906	Astatotilapia_calliptera
ENSCSEG00000014984	larsb	100	87.268	ENSAMXG00000019979	larsb	100	87.099	Astyanax_mexicanus
ENSCSEG00000014984	larsb	100	77.403	ENSBTAG00000006765	LARS	100	77.403	Bos_taurus
ENSCSEG00000014984	larsb	99	54.858	WBGene00003073	lars-1	99	54.858	Caenorhabditis_elegans
ENSCSEG00000014984	larsb	100	77.656	ENSCJAG00000021314	LARS	100	78.515	Callithrix_jacchus
ENSCSEG00000014984	larsb	100	78.078	ENSCAFG00000006431	LARS	100	78.162	Canis_familiaris
ENSCSEG00000014984	larsb	100	77.155	ENSCAFG00020025009	LARS	99	78.209	Canis_lupus_dingo
ENSCSEG00000014984	larsb	100	77.909	ENSCHIG00000014949	LARS	100	77.909	Capra_hircus
ENSCSEG00000014984	larsb	100	77.150	ENSTSYG00000001253	LARS	100	77.150	Carlito_syrichta
ENSCSEG00000014984	larsb	98	60.475	ENSCAPG00000015676	LARS	97	62.030	Cavia_aperea
ENSCSEG00000014984	larsb	100	76.391	ENSCPOG00000012329	LARS	100	76.391	Cavia_porcellus
ENSCSEG00000014984	larsb	99	78.191	ENSCCAG00000020789	LARS	99	78.191	Cebus_capucinus
ENSCSEG00000014984	larsb	99	77.185	ENSCATG00000033463	LARS	100	78.515	Cercocebus_atys
ENSCSEG00000014984	larsb	100	76.728	ENSCLAG00000011193	LARS	100	76.728	Chinchilla_lanigera
ENSCSEG00000014984	larsb	99	77.835	ENSCSAG00000012280	LARS	97	77.835	Chlorocebus_sabaeus
ENSCSEG00000014984	larsb	90	70.249	ENSCHOG00000009309	LARS	90	70.249	Choloepus_hoffmanni
ENSCSEG00000014984	larsb	100	78.017	ENSCPBG00000008415	LARS	99	80.197	Chrysemys_picta_bellii
ENSCSEG00000014984	larsb	100	63.144	ENSCING00000008535	-	99	63.835	Ciona_intestinalis
ENSCSEG00000014984	larsb	100	62.318	ENSCSAVG00000009040	-	100	67.975	Ciona_savignyi
ENSCSEG00000014984	larsb	100	77.656	ENSCANG00000031137	LARS	100	77.656	Colobus_angolensis_palliatus
ENSCSEG00000014984	larsb	93	72.323	ENSCGRG00001004647	Lars	99	72.207	Cricetulus_griseus_chok1gshd
ENSCSEG00000014984	larsb	100	74.978	ENSCGRG00000007284	Lars	100	73.968	Cricetulus_griseus_crigri
ENSCSEG00000014984	larsb	100	92.074	ENSCVAG00000014685	larsb	100	92.327	Cyprinodon_variegatus
ENSCSEG00000014984	larsb	67	87.359	ENSDARG00000019280	larsb	100	87.359	Danio_rerio
ENSCSEG00000014984	larsb	98	75.285	ENSDNOG00000017963	LARS	100	77.526	Dasypus_novemcinctus
ENSCSEG00000014984	larsb	100	72.727	ENSDORG00000014913	Lars	100	72.727	Dipodomys_ordii
ENSCSEG00000014984	larsb	99	58.132	FBgn0284253	LeuRS	99	58.291	Drosophila_melanogaster
ENSCSEG00000014984	larsb	92	64.918	ENSETEG00000003145	LARS	100	62.724	Echinops_telfairi
ENSCSEG00000014984	larsb	92	60.055	ENSEBUG00000014985	larsb	97	58.781	Eptatretus_burgeri
ENSCSEG00000014984	larsb	100	78.331	ENSEASG00005020569	LARS	100	78.643	Equus_asinus_asinus
ENSCSEG00000014984	larsb	100	78.162	ENSECAG00000008963	LARS	100	79.045	Equus_caballus
ENSCSEG00000014984	larsb	85	79.167	ENSEEUG00000014854	LARS	85	79.167	Erinaceus_europaeus
ENSCSEG00000014984	larsb	100	85.497	ENSELUG00000023311	larsb	100	85.582	Esox_lucius
ENSCSEG00000014984	larsb	100	77.328	ENSFCAG00000008715	LARS	100	79.832	Felis_catus
ENSCSEG00000014984	larsb	100	78.415	ENSFALG00000003209	LARS	93	78.415	Ficedula_albicollis
ENSCSEG00000014984	larsb	100	76.644	ENSFDAG00000020764	LARS	100	76.813	Fukomys_damarensis
ENSCSEG00000014984	larsb	91	93.172	ENSFHEG00000010437	larsb	100	92.613	Fundulus_heteroclitus
ENSCSEG00000014984	larsb	100	84.410	ENSGMOG00000013645	larsb	99	85.316	Gadus_morhua
ENSCSEG00000014984	larsb	100	78.722	ENSGALG00000007494	LARS	98	81.022	Gallus_gallus
ENSCSEG00000014984	larsb	100	91.062	ENSGAFG00000005029	larsb	100	91.315	Gambusia_affinis
ENSCSEG00000014984	larsb	99	89.527	ENSGACG00000020720	larsb	99	89.527	Gasterosteus_aculeatus
ENSCSEG00000014984	larsb	100	77.241	ENSGAGG00000002353	LARS	99	78.209	Gopherus_agassizii
ENSCSEG00000014984	larsb	100	77.740	ENSGGOG00000004103	LARS	100	77.740	Gorilla_gorilla
ENSCSEG00000014984	larsb	99	90.085	ENSHBUG00000003051	larsb	100	92.391	Haplochromis_burtoni
ENSCSEG00000014984	larsb	100	76.644	ENSHGLG00000006937	LARS	100	76.644	Heterocephalus_glaber_female
ENSCSEG00000014984	larsb	100	76.644	ENSHGLG00100002801	LARS	100	76.644	Heterocephalus_glaber_male
ENSCSEG00000014984	larsb	99	90.717	ENSHCOG00000003651	larsb	100	90.802	Hippocampus_comes
ENSCSEG00000014984	larsb	100	84.570	ENSIPUG00000010756	lars	100	84.820	Ictalurus_punctatus
ENSCSEG00000014984	larsb	100	77.572	ENSSTOG00000002356	LARS	100	77.572	Ictidomys_tridecemlineatus
ENSCSEG00000014984	larsb	100	76.391	ENSJJAG00000015265	Lars	100	76.391	Jaculus_jaculus
ENSCSEG00000014984	larsb	100	92.243	ENSKMAG00000009903	larsb	100	92.327	Kryptolebias_marmoratus
ENSCSEG00000014984	larsb	100	91.990	ENSLBEG00000025237	larsb	100	92.081	Labrus_bergylta
ENSCSEG00000014984	larsb	100	79.040	ENSLACG00000009321	LARS	100	79.040	Latimeria_chalumnae
ENSCSEG00000014984	larsb	99	82.025	ENSLOCG00000010442	larsb	100	82.194	Lepisosteus_oculatus
ENSCSEG00000014984	larsb	100	76.248	ENSLAFG00000000318	LARS	100	77.111	Loxodonta_africana
ENSCSEG00000014984	larsb	100	77.656	ENSMFAG00000038685	LARS	100	77.656	Macaca_fascicularis
ENSCSEG00000014984	larsb	100	77.656	ENSMMUG00000029787	LARS	100	77.656	Macaca_mulatta
ENSCSEG00000014984	larsb	100	75.282	ENSMNEG00000044014	LARS	99	75.845	Macaca_nemestrina
ENSCSEG00000014984	larsb	100	76.810	ENSMLEG00000037563	LARS	99	77.787	Mandrillus_leucophaeus
ENSCSEG00000014984	larsb	100	92.749	ENSMAMG00000021385	larsb	100	92.833	Mastacembelus_armatus
ENSCSEG00000014984	larsb	100	91.821	ENSMZEG00005002662	larsb	100	91.821	Maylandia_zebra
ENSCSEG00000014984	larsb	98	78.364	ENSMGAG00000009388	LARS	100	79.720	Meleagris_gallopavo
ENSCSEG00000014984	larsb	99	67.257	ENSMAUG00000003063	Lars	94	79.661	Mesocricetus_auratus
ENSCSEG00000014984	larsb	100	64.755	ENSMICG00000035435	-	100	64.755	Microcebus_murinus
ENSCSEG00000014984	larsb	100	78.246	ENSMICG00000035589	-	100	78.246	Microcebus_murinus
ENSCSEG00000014984	larsb	100	76.431	ENSMOCG00000002092	Lars	100	76.495	Microtus_ochrogaster
ENSCSEG00000014984	larsb	100	88.954	ENSMMOG00000013802	larsb	100	88.954	Mola_mola
ENSCSEG00000014984	larsb	99	72.918	ENSMODG00000010231	LARS	99	72.918	Monodelphis_domestica
ENSCSEG00000014984	larsb	100	88.775	ENSMALG00000018444	larsb	99	89.589	Monopterus_albus
ENSCSEG00000014984	larsb	100	76.263	MGP_CAROLIEiJ_G0022225	Lars	100	76.158	Mus_caroli
ENSCSEG00000014984	larsb	100	75.758	ENSMUSG00000024493	Lars	100	75.653	Mus_musculus
ENSCSEG00000014984	larsb	100	76.094	MGP_PahariEiJ_G0018958	Lars	100	75.990	Mus_pahari
ENSCSEG00000014984	larsb	100	76.178	MGP_SPRETEiJ_G0023135	Lars	100	76.074	Mus_spretus
ENSCSEG00000014984	larsb	100	78.078	ENSMPUG00000007844	LARS	100	78.078	Mustela_putorius_furo
ENSCSEG00000014984	larsb	100	75.969	ENSMLUG00000001125	LARS	100	76.962	Myotis_lucifugus
ENSCSEG00000014984	larsb	100	75.464	ENSNGAG00000011596	Lars	100	75.632	Nannospalax_galili
ENSCSEG00000014984	larsb	100	91.821	ENSNBRG00000005764	larsb	100	91.821	Neolamprologus_brichardi
ENSCSEG00000014984	larsb	100	76.379	ENSNLEG00000009816	LARS	99	77.365	Nomascus_leucogenys
ENSCSEG00000014984	larsb	53	81.081	ENSMEUG00000002332	-	53	80.508	Notamacropus_eugenii
ENSCSEG00000014984	larsb	80	80.319	ENSOPRG00000003076	LARS	83	81.383	Ochotona_princeps
ENSCSEG00000014984	larsb	99	74.810	ENSODEG00000004882	LARS	99	74.810	Octodon_degus
ENSCSEG00000014984	larsb	100	92.159	ENSONIG00000008493	larsb	100	92.159	Oreochromis_niloticus
ENSCSEG00000014984	larsb	100	75.063	ENSOANG00000005755	LARS	100	74.376	Ornithorhynchus_anatinus
ENSCSEG00000014984	larsb	100	77.572	ENSOCUG00000015684	LARS	100	77.572	Oryctolagus_cuniculus
ENSCSEG00000014984	larsb	100	91.821	ENSORLG00000001622	larsb	100	92.074	Oryzias_latipes
ENSCSEG00000014984	larsb	100	91.906	ENSORLG00020019950	larsb	100	92.159	Oryzias_latipes_hni
ENSCSEG00000014984	larsb	100	91.906	ENSORLG00015003895	larsb	100	92.159	Oryzias_latipes_hsok
ENSCSEG00000014984	larsb	100	91.821	ENSOMEG00000005677	larsb	100	91.821	Oryzias_melastigma
ENSCSEG00000014984	larsb	98	74.498	ENSOGAG00000008750	LARS	100	75.608	Otolemur_garnettii
ENSCSEG00000014984	larsb	100	77.656	ENSOARG00000015911	-	99	77.656	Ovis_aries
ENSCSEG00000014984	larsb	100	76.744	ENSOARG00000002454	-	100	77.722	Ovis_aries
ENSCSEG00000014984	larsb	100	76.724	ENSPPAG00000027964	LARS	99	77.703	Pan_paniscus
ENSCSEG00000014984	larsb	100	78.415	ENSPPRG00000023492	LARS	100	78.415	Panthera_pardus
ENSCSEG00000014984	larsb	100	78.246	ENSPTIG00000013110	LARS	100	78.246	Panthera_tigris_altaica
ENSCSEG00000014984	larsb	100	77.572	ENSPTRG00000017372	LARS	100	77.572	Pan_troglodytes
ENSCSEG00000014984	larsb	100	77.740	ENSPANG00000002663	LARS	100	77.740	Papio_anubis
ENSCSEG00000014984	larsb	98	83.333	ENSPKIG00000006650	larsb	99	80.892	Paramormyrops_kingsleyae
ENSCSEG00000014984	larsb	100	77.845	ENSPSIG00000015641	LARS	100	78.801	Pelodiscus_sinensis
ENSCSEG00000014984	larsb	67	92.000	ENSPMGG00000019556	LARS	100	92.000	Periophthalmus_magnuspinnatus
ENSCSEG00000014984	larsb	100	75.723	ENSPEMG00000010933	Lars	100	75.614	Peromyscus_maniculatus_bairdii
ENSCSEG00000014984	larsb	51	59.446	ENSPMAG00000005301	larsb	99	60.365	Petromyzon_marinus
ENSCSEG00000014984	larsb	100	76.476	ENSPCIG00000030572	LARS	100	76.476	Phascolarctos_cinereus
ENSCSEG00000014984	larsb	100	91.821	ENSPFOG00000002361	larsb	100	92.074	Poecilia_formosa
ENSCSEG00000014984	larsb	100	91.737	ENSPLAG00000016550	larsb	100	91.990	Poecilia_latipinna
ENSCSEG00000014984	larsb	100	91.653	ENSPMEG00000018422	larsb	100	91.906	Poecilia_mexicana
ENSCSEG00000014984	larsb	100	91.231	ENSPREG00000005668	larsb	100	91.484	Poecilia_reticulata
ENSCSEG00000014984	larsb	99	76.138	ENSPPYG00000015908	LARS	97	76.391	Pongo_abelii
ENSCSEG00000014984	larsb	86	64.769	ENSPCAG00000005621	LARS	96	65.456	Procavia_capensis
ENSCSEG00000014984	larsb	100	76.981	ENSPCOG00000019325	LARS	100	76.981	Propithecus_coquereli
ENSCSEG00000014984	larsb	98	67.810	ENSPVAG00000011237	LARS	99	69.580	Pteropus_vampyrus
ENSCSEG00000014984	larsb	100	91.821	ENSPNYG00000015254	larsb	100	91.821	Pundamilia_nyererei
ENSCSEG00000014984	larsb	100	85.245	ENSPNAG00000027191	larsb	100	85.245	Pygocentrus_nattereri
ENSCSEG00000014984	larsb	100	75.842	ENSRNOG00000018304	Lars	100	75.737	Rattus_norvegicus
ENSCSEG00000014984	larsb	94	76.523	ENSRBIG00000043198	LARS	99	76.523	Rhinopithecus_bieti
ENSCSEG00000014984	larsb	90	46.733	YPL160W	CDC60	99	46.370	Saccharomyces_cerevisiae
ENSCSEG00000014984	larsb	99	75.338	ENSSBOG00000026661	LARS	100	78.456	Saimiri_boliviensis_boliviensis
ENSCSEG00000014984	larsb	100	78.180	ENSSHAG00000006084	LARS	100	78.180	Sarcophilus_harrisii
ENSCSEG00000014984	larsb	97	84.192	ENSSFOG00015018117	larsb	90	84.192	Scleropages_formosus
ENSCSEG00000014984	larsb	88	93.193	ENSSMAG00000004078	larsb	97	93.289	Scophthalmus_maximus
ENSCSEG00000014984	larsb	100	93.255	ENSSDUG00000021142	larsb	100	93.339	Seriola_dumerili
ENSCSEG00000014984	larsb	100	93.423	ENSSLDG00000007054	larsb	100	93.508	Seriola_lalandi_dorsalis
ENSCSEG00000014984	larsb	85	74.400	ENSSARG00000013481	LARS	82	79.208	Sorex_araneus
ENSCSEG00000014984	larsb	100	77.909	ENSSPUG00000013805	LARS	100	77.909	Sphenodon_punctatus
ENSCSEG00000014984	larsb	100	93.508	ENSSPAG00000012124	larsb	100	93.592	Stegastes_partitus
ENSCSEG00000014984	larsb	100	74.958	ENSSSCG00000014411	LARS	100	74.958	Sus_scrofa
ENSCSEG00000014984	larsb	100	77.500	ENSTGUG00000000092	-	99	78.378	Taeniopygia_guttata
ENSCSEG00000014984	larsb	100	88.786	ENSTRUG00000005358	larsb	100	88.870	Takifugu_rubripes
ENSCSEG00000014984	larsb	99	85.630	ENSTNIG00000018214	larsb	100	85.546	Tetraodon_nigroviridis
ENSCSEG00000014984	larsb	92	77.419	ENSTBEG00000003757	LARS	94	75.686	Tupaia_belangeri
ENSCSEG00000014984	larsb	98	74.648	ENSTTRG00000016712	LARS	96	75.678	Tursiops_truncatus
ENSCSEG00000014984	larsb	94	79.338	ENSUAMG00000019907	LARS	99	79.338	Ursus_americanus
ENSCSEG00000014984	larsb	100	78.331	ENSUMAG00000010585	LARS	100	78.331	Ursus_maritimus
ENSCSEG00000014984	larsb	92	77.181	ENSVPAG00000000557	LARS	92	77.181	Vicugna_pacos
ENSCSEG00000014984	larsb	100	78.078	ENSVVUG00000021124	LARS	100	78.078	Vulpes_vulpes
ENSCSEG00000014984	larsb	100	79.612	ENSXETG00000002320	lars	100	79.612	Xenopus_tropicalis
ENSCSEG00000014984	larsb	100	91.062	ENSXMAG00000001454	larsb	100	91.315	Xiphophorus_maculatus