EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000015006 (Gene tree)
Gene ID: 103398741
Gene Symbol: -
Alias: -
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 2012 bases
Position: chrKI934281.1:180739-182750
Accession: 103398741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000023521	Ribonuc_P_40	PF08584.11	4.9e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000023829	-	1047	XM_008337463	ENSCSEP00000023521	348 (aa)	XP_008335685	UPI0004961CAD

Gene Model

Click here to download ENSCSEG00000015006's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03008	Ribosome biogenesis in eukaryotes	KEGG
csem03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000015006	-	98	36.236	ENSG00000124787	RPP40	98	36.236	Homo_sapiens
ENSCSEG00000015006	-	89	48.571	ENSAPOG00000008660	rpp40	92	48.571	Acanthochromis_polyacanthus
ENSCSEG00000015006	-	98	36.236	ENSAMEG00000012938	RPP40	98	36.236	Ailuropoda_melanoleuca
ENSCSEG00000015006	-	99	54.598	ENSACIG00000003617	rpp40	99	54.310	Amphilophus_citrinellus
ENSCSEG00000015006	-	100	59.544	ENSAOCG00000011846	rpp40	100	59.259	Amphiprion_ocellaris
ENSCSEG00000015006	-	100	59.544	ENSAPEG00000001322	rpp40	100	59.259	Amphiprion_percula
ENSCSEG00000015006	-	100	57.955	ENSATEG00000006584	rpp40	100	57.955	Anabas_testudineus
ENSCSEG00000015006	-	83	36.424	ENSAPLG00000005691	RPP40	99	36.424	Anas_platyrhynchos
ENSCSEG00000015006	-	98	35.311	ENSACAG00000006550	RPP40	87	35.311	Anolis_carolinensis
ENSCSEG00000015006	-	98	35.393	ENSANAG00000029246	RPP40	98	35.393	Aotus_nancymaae
ENSCSEG00000015006	-	98	57.849	ENSACLG00000015883	rpp40	96	57.267	Astatotilapia_calliptera
ENSCSEG00000015006	-	100	40.947	ENSAMXG00000001755	rpp40	100	40.111	Astyanax_mexicanus
ENSCSEG00000015006	-	98	36.798	ENSBTAG00000003332	RPP40	98	36.798	Bos_taurus
ENSCSEG00000015006	-	98	35.955	ENSCJAG00000021373	RPP40	98	35.955	Callithrix_jacchus
ENSCSEG00000015006	-	98	35.112	ENSCAFG00000009435	RPP40	98	35.112	Canis_familiaris
ENSCSEG00000015006	-	98	35.112	ENSCAFG00020013380	RPP40	98	35.112	Canis_lupus_dingo
ENSCSEG00000015006	-	98	35.493	ENSCHIG00000016849	RPP40	99	35.099	Capra_hircus
ENSCSEG00000015006	-	98	35.393	ENSTSYG00000032857	RPP40	98	35.452	Carlito_syrichta
ENSCSEG00000015006	-	89	33.645	ENSCAPG00000004957	RPP40	96	33.645	Cavia_aperea
ENSCSEG00000015006	-	98	36.236	ENSCPOG00000005855	RPP40	98	36.236	Cavia_porcellus
ENSCSEG00000015006	-	98	35.955	ENSCCAG00000019809	RPP40	98	35.955	Cebus_capucinus
ENSCSEG00000015006	-	98	36.517	ENSCATG00000038787	RPP40	98	36.517	Cercocebus_atys
ENSCSEG00000015006	-	98	36.517	ENSCLAG00000003235	RPP40	98	36.517	Chinchilla_lanigera
ENSCSEG00000015006	-	98	36.798	ENSCSAG00000007307	RPP40	98	36.798	Chlorocebus_sabaeus
ENSCSEG00000015006	-	98	36.798	ENSCPBG00000009003	RPP40	98	36.798	Chrysemys_picta_bellii
ENSCSEG00000015006	-	98	36.798	ENSCANG00000033965	RPP40	98	36.798	Colobus_angolensis_palliatus
ENSCSEG00000015006	-	98	34.734	ENSCGRG00001018328	Rpp40	98	34.648	Cricetulus_griseus_chok1gshd
ENSCSEG00000015006	-	98	34.734	ENSCGRG00000011344	Rpp40	98	34.648	Cricetulus_griseus_crigri
ENSCSEG00000015006	-	74	51.515	ENSCVAG00000012169	rpp40	100	50.758	Cyprinodon_variegatus
ENSCSEG00000015006	-	100	41.989	ENSDARG00000017605	rpp40	100	41.713	Danio_rerio
ENSCSEG00000015006	-	80	36.770	ENSDNOG00000048136	RPP40	97	36.770	Dasypus_novemcinctus
ENSCSEG00000015006	-	98	35.393	ENSDORG00000029944	-	98	35.393	Dipodomys_ordii
ENSCSEG00000015006	-	59	33.945	ENSETEG00000007458	RPP40	60	33.945	Echinops_telfairi
ENSCSEG00000015006	-	99	34.358	ENSEBUG00000000386	rpp40	99	33.540	Eptatretus_burgeri
ENSCSEG00000015006	-	98	35.955	ENSEASG00005012116	RPP40	78	35.955	Equus_asinus_asinus
ENSCSEG00000015006	-	98	35.674	ENSECAG00000017247	RPP40	78	35.674	Equus_caballus
ENSCSEG00000015006	-	98	48.034	ENSELUG00000017004	rpp40	98	47.753	Esox_lucius
ENSCSEG00000015006	-	98	35.955	ENSFCAG00000009249	RPP40	98	35.955	Felis_catus
ENSCSEG00000015006	-	86	36.196	ENSFALG00000013166	RPP40	99	36.196	Ficedula_albicollis
ENSCSEG00000015006	-	81	31.058	ENSFDAG00000000265	-	100	31.058	Fukomys_damarensis
ENSCSEG00000015006	-	98	35.955	ENSFDAG00000013001	-	98	35.674	Fukomys_damarensis
ENSCSEG00000015006	-	100	57.265	ENSFHEG00000021429	rpp40	89	57.265	Fundulus_heteroclitus
ENSCSEG00000015006	-	89	42.587	ENSGMOG00000018653	rpp40	100	42.587	Gadus_morhua
ENSCSEG00000015006	-	98	35.028	ENSGALG00000036074	RPP40	98	35.028	Gallus_gallus
ENSCSEG00000015006	-	83	45.051	ENSGAFG00000004189	-	100	45.051	Gambusia_affinis
ENSCSEG00000015006	-	100	58.192	ENSGACG00000002472	rpp40	100	58.192	Gasterosteus_aculeatus
ENSCSEG00000015006	-	98	37.079	ENSGAGG00000012918	RPP40	98	37.079	Gopherus_agassizii
ENSCSEG00000015006	-	98	36.236	ENSGGOG00000013764	RPP40	98	36.236	Gorilla_gorilla
ENSCSEG00000015006	-	89	55.128	ENSHBUG00000009378	rpp40	92	54.921	Haplochromis_burtoni
ENSCSEG00000015006	-	98	36.798	ENSHGLG00000004871	RPP40	98	36.517	Heterocephalus_glaber_female
ENSCSEG00000015006	-	98	36.517	ENSHGLG00100002080	RPP40	98	36.236	Heterocephalus_glaber_male
ENSCSEG00000015006	-	95	45.833	ENSHCOG00000013264	-	94	45.058	Hippocampus_comes
ENSCSEG00000015006	-	100	43.056	ENSIPUG00000008951	RPP40	100	42.778	Ictalurus_punctatus
ENSCSEG00000015006	-	98	34.551	ENSSTOG00000011199	RPP40	98	34.551	Ictidomys_tridecemlineatus
ENSCSEG00000015006	-	98	34.930	ENSJJAG00000020629	Rpp40	98	34.648	Jaculus_jaculus
ENSCSEG00000015006	-	100	57.835	ENSKMAG00000019358	rpp40	100	57.835	Kryptolebias_marmoratus
ENSCSEG00000015006	-	100	57.183	ENSLBEG00000022724	rpp40	100	57.183	Labrus_bergylta
ENSCSEG00000015006	-	100	36.740	ENSLACG00000014848	RPP40	100	36.740	Latimeria_chalumnae
ENSCSEG00000015006	-	100	41.713	ENSLOCG00000011650	rpp40	99	41.160	Lepisosteus_oculatus
ENSCSEG00000015006	-	82	37.124	ENSLAFG00000007530	RPP40	98	37.124	Loxodonta_africana
ENSCSEG00000015006	-	98	36.517	ENSMFAG00000043100	RPP40	98	36.517	Macaca_fascicularis
ENSCSEG00000015006	-	98	36.517	ENSMMUG00000004966	RPP40	98	36.517	Macaca_mulatta
ENSCSEG00000015006	-	98	36.517	ENSMNEG00000041986	RPP40	98	36.517	Macaca_nemestrina
ENSCSEG00000015006	-	98	32.486	ENSMLEG00000040851	RPP40	99	40.594	Mandrillus_leucophaeus
ENSCSEG00000015006	-	100	60.969	ENSMAMG00000019551	rpp40	99	60.684	Mastacembelus_armatus
ENSCSEG00000015006	-	99	58.000	ENSMZEG00005019475	rpp40	99	57.429	Maylandia_zebra
ENSCSEG00000015006	-	89	37.152	ENSMGAG00000004009	RPP40	89	37.152	Meleagris_gallopavo
ENSCSEG00000015006	-	98	35.112	ENSMAUG00000010268	Rpp40	98	35.112	Mesocricetus_auratus
ENSCSEG00000015006	-	98	37.921	ENSMICG00000003297	RPP40	98	34.091	Microcebus_murinus
ENSCSEG00000015006	-	98	35.674	ENSMOCG00000000305	Rpp40	98	35.674	Microtus_ochrogaster
ENSCSEG00000015006	-	100	49.858	ENSMMOG00000020591	-	100	49.573	Mola_mola
ENSCSEG00000015006	-	98	34.454	ENSMODG00000009826	RPP40	98	34.454	Monodelphis_domestica
ENSCSEG00000015006	-	100	58.689	ENSMALG00000020133	rpp40	100	58.405	Monopterus_albus
ENSCSEG00000015006	-	98	34.831	MGP_CAROLIEiJ_G0018429	Rpp40	98	34.831	Mus_caroli
ENSCSEG00000015006	-	98	35.393	ENSMUSG00000021418	Rpp40	98	35.393	Mus_musculus
ENSCSEG00000015006	-	98	35.112	MGP_PahariEiJ_G0019497	Rpp40	98	35.112	Mus_pahari
ENSCSEG00000015006	-	98	35.393	MGP_SPRETEiJ_G0019309	Rpp40	98	35.393	Mus_spretus
ENSCSEG00000015006	-	98	34.831	ENSMPUG00000000530	RPP40	91	34.831	Mustela_putorius_furo
ENSCSEG00000015006	-	98	37.360	ENSMLUG00000000501	RPP40	98	37.360	Myotis_lucifugus
ENSCSEG00000015006	-	98	35.754	ENSNGAG00000023955	-	98	35.674	Nannospalax_galili
ENSCSEG00000015006	-	93	33.631	ENSNGAG00000022529	-	97	33.533	Nannospalax_galili
ENSCSEG00000015006	-	88	51.757	ENSNBRG00000017465	rpp40	86	51.104	Neolamprologus_brichardi
ENSCSEG00000015006	-	98	35.674	ENSNLEG00000034397	RPP40	98	35.674	Nomascus_leucogenys
ENSCSEG00000015006	-	98	37.465	ENSODEG00000018153	-	98	37.465	Octodon_degus
ENSCSEG00000015006	-	98	37.360	ENSODEG00000007255	-	98	37.360	Octodon_degus
ENSCSEG00000015006	-	89	32.508	ENSODEG00000006170	-	100	32.508	Octodon_degus
ENSCSEG00000015006	-	99	58.571	ENSONIG00000014016	rpp40	99	58.000	Oreochromis_niloticus
ENSCSEG00000015006	-	82	36.333	ENSOANG00000001200	RPP40	98	36.333	Ornithorhynchus_anatinus
ENSCSEG00000015006	-	98	37.853	ENSOCUG00000000354	RPP40	97	37.853	Oryctolagus_cuniculus
ENSCSEG00000015006	-	99	54.179	ENSORLG00000008242	-	99	54.467	Oryzias_latipes
ENSCSEG00000015006	-	97	55.325	ENSORLG00020013745	-	88	55.621	Oryzias_latipes_hni
ENSCSEG00000015006	-	99	54.179	ENSORLG00015000887	-	99	54.467	Oryzias_latipes_hsok
ENSCSEG00000015006	-	99	56.772	ENSOMEG00000002747	rpp40	99	56.196	Oryzias_melastigma
ENSCSEG00000015006	-	98	37.360	ENSOGAG00000006055	RPP40	98	37.360	Otolemur_garnettii
ENSCSEG00000015006	-	89	35.385	ENSOARG00000018783	RPP40	99	35.099	Ovis_aries
ENSCSEG00000015006	-	98	36.798	ENSPPAG00000023703	RPP40	98	36.798	Pan_paniscus
ENSCSEG00000015006	-	98	35.955	ENSPPRG00000005612	RPP40	98	35.955	Panthera_pardus
ENSCSEG00000015006	-	98	33.714	ENSPTIG00000018847	RPP40	98	33.714	Panthera_tigris_altaica
ENSCSEG00000015006	-	98	36.517	ENSPTRG00000017690	RPP40	98	36.517	Pan_troglodytes
ENSCSEG00000015006	-	98	36.236	ENSPANG00000017865	RPP40	98	36.236	Papio_anubis
ENSCSEG00000015006	-	100	38.781	ENSPKIG00000006311	rpp40	100	38.504	Paramormyrops_kingsleyae
ENSCSEG00000015006	-	60	35.586	ENSPSIG00000007854	RPP40	99	35.586	Pelodiscus_sinensis
ENSCSEG00000015006	-	80	31.633	ENSPEMG00000020809	Rpp40	88	31.633	Peromyscus_maniculatus_bairdii
ENSCSEG00000015006	-	75	33.696	ENSPMAG00000008412	rpp40	99	33.333	Petromyzon_marinus
ENSCSEG00000015006	-	98	35.393	ENSPCIG00000010682	RPP40	98	35.393	Phascolarctos_cinereus
ENSCSEG00000015006	-	100	51.420	ENSPFOG00000011460	rpp40	99	51.420	Poecilia_formosa
ENSCSEG00000015006	-	100	51.143	ENSPLAG00000001334	rpp40	100	51.143	Poecilia_latipinna
ENSCSEG00000015006	-	100	52.286	ENSPMEG00000007721	rpp40	100	52.286	Poecilia_mexicana
ENSCSEG00000015006	-	100	52.000	ENSPREG00000009215	rpp40	100	52.000	Poecilia_reticulata
ENSCSEG00000015006	-	98	35.955	ENSPPYG00000016194	RPP40	98	35.955	Pongo_abelii
ENSCSEG00000015006	-	98	36.798	ENSPCOG00000003907	RPP40	98	36.798	Propithecus_coquereli
ENSCSEG00000015006	-	98	36.798	ENSPVAG00000011325	RPP40	98	36.798	Pteropus_vampyrus
ENSCSEG00000015006	-	83	53.584	ENSPNYG00000004432	rpp40	100	52.218	Pundamilia_nyererei
ENSCSEG00000015006	-	100	41.989	ENSPNAG00000019125	rpp40	100	41.713	Pygocentrus_nattereri
ENSCSEG00000015006	-	98	35.754	ENSRNOG00000016226	Rpp40	98	35.674	Rattus_norvegicus
ENSCSEG00000015006	-	98	36.517	ENSRBIG00000035800	RPP40	98	36.517	Rhinopithecus_bieti
ENSCSEG00000015006	-	98	36.517	ENSRROG00000039116	RPP40	98	36.517	Rhinopithecus_roxellana
ENSCSEG00000015006	-	98	35.674	ENSSBOG00000020297	RPP40	98	35.674	Saimiri_boliviensis_boliviensis
ENSCSEG00000015006	-	75	36.364	ENSSHAG00000002102	RPP40	99	36.364	Sarcophilus_harrisii
ENSCSEG00000015006	-	100	41.551	ENSSFOG00015001142	rpp40	81	40.997	Scleropages_formosus
ENSCSEG00000015006	-	100	61.690	ENSSDUG00000007202	rpp40	100	61.408	Seriola_dumerili
ENSCSEG00000015006	-	100	61.127	ENSSLDG00000017563	rpp40	100	60.845	Seriola_lalandi_dorsalis
ENSCSEG00000015006	-	81	34.122	ENSSPUG00000018950	-	100	34.122	Sphenodon_punctatus
ENSCSEG00000015006	-	98	35.754	ENSSPUG00000017487	-	98	35.674	Sphenodon_punctatus
ENSCSEG00000015006	-	100	59.544	ENSSPAG00000022716	rpp40	100	59.544	Stegastes_partitus
ENSCSEG00000015006	-	98	37.640	ENSSSCG00000000998	RPP40	99	38.284	Sus_scrofa
ENSCSEG00000015006	-	98	36.056	ENSTGUG00000002258	-	99	36.056	Taeniopygia_guttata
ENSCSEG00000015006	-	99	57.507	ENSTRUG00000003755	rpp40	99	57.224	Takifugu_rubripes
ENSCSEG00000015006	-	100	54.085	ENSTNIG00000003077	rpp40	100	53.803	Tetraodon_nigroviridis
ENSCSEG00000015006	-	98	31.180	ENSTTRG00000007319	RPP40	98	31.180	Tursiops_truncatus
ENSCSEG00000015006	-	98	35.112	ENSUAMG00000002159	RPP40	98	35.112	Ursus_americanus
ENSCSEG00000015006	-	98	35.112	ENSUMAG00000018639	RPP40	92	35.112	Ursus_maritimus
ENSCSEG00000015006	-	98	34.831	ENSVVUG00000005451	RPP40	98	34.831	Vulpes_vulpes
ENSCSEG00000015006	-	98	35.674	ENSXETG00000017617	rpp40	98	35.211	Xenopus_tropicalis
ENSCSEG00000015006	-	100	38.920	ENSXMAG00000024940	rpp40	99	39.093	Xiphophorus_maculatus