EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000015030 (Gene tree)
Gene ID: 103395982
Gene Symbol: -
Alias: -
Full Name: pre-mRNA-splicing factor 38B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 7367 bases
Position: chr20:2566843-2574209
Accession: 103395982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000023560	PRP38	PF03371.15	2e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000023868	-	4882	XM_008333860	ENSCSEP00000023560	461 (aa)	XP_008332082	UPI0004962197

Gene Model

Click here to download ENSCSEG00000015030's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000015030	-	100	86.667	ENSATEG00000014482	-	100	86.882	Anabas_testudineus
ENSCSEG00000015030	-	60	81.159	ENSBTAG00000047874	PRPF38B	93	60.429	Bos_taurus
ENSCSEG00000015030	-	58	45.185	WBGene00022434	Y108G3AL.2	87	43.554	Caenorhabditis_elegans
ENSCSEG00000015030	-	98	56.496	ENSCAFG00020010992	-	91	56.496	Canis_lupus_dingo
ENSCSEG00000015030	-	60	81.159	ENSCHIG00000024357	-	93	60.429	Capra_hircus
ENSCSEG00000015030	-	59	81.752	ENSCPOG00000039545	-	91	60.479	Cavia_porcellus
ENSCSEG00000015030	-	59	81.752	ENSCLAG00000005801	-	91	60.990	Chinchilla_lanigera
ENSCSEG00000015030	-	53	57.090	ENSCSAVG00000009443	-	88	63.052	Ciona_savignyi
ENSCSEG00000015030	-	59	79.273	ENSETEG00000014690	-	90	65.931	Echinops_telfairi
ENSCSEG00000015030	-	100	65.392	ENSELUG00000010390	-	70	65.632	Esox_lucius
ENSCSEG00000015030	-	100	71.339	ENSGMOG00000012080	-	99	71.130	Gadus_morhua
ENSCSEG00000015030	-	100	77.682	ENSGAFG00000008943	-	100	78.755	Gambusia_affinis
ENSCSEG00000015030	-	59	81.752	ENSHGLG00000016583	PRPF38B	91	60.594	Heterocephalus_glaber_female
ENSCSEG00000015030	-	59	81.752	ENSHGLG00100015525	-	91	60.594	Heterocephalus_glaber_male
ENSCSEG00000015030	-	100	80.994	ENSHCOG00000001071	-	100	83.369	Hippocampus_comes
ENSCSEG00000015030	-	100	80.211	ENSKMAG00000005540	-	100	80.421	Kryptolebias_marmoratus
ENSCSEG00000015030	-	97	56.832	ENSLACG00000015511	-	94	56.920	Latimeria_chalumnae
ENSCSEG00000015030	-	59	81.455	ENSMOCG00000020285	-	80	62.719	Microtus_ochrogaster
ENSCSEG00000015030	-	100	82.265	ENSMMOG00000011639	-	100	82.906	Mola_mola
ENSCSEG00000015030	-	64	77.377	ENSMODG00000002350	-	85	82.528	Monodelphis_domestica
ENSCSEG00000015030	-	100	86.882	ENSMALG00000019479	-	100	86.452	Monopterus_albus
ENSCSEG00000015030	-	100	83.120	ENSONIG00000010129	-	100	82.796	Oreochromis_niloticus
ENSCSEG00000015030	-	87	62.763	ENSOANG00000007343	-	92	59.091	Ornithorhynchus_anatinus
ENSCSEG00000015030	-	100	82.468	ENSORLG00000015621	-	95	96.951	Oryzias_latipes
ENSCSEG00000015030	-	100	82.900	ENSORLG00020016276	-	94	96.951	Oryzias_latipes_hni
ENSCSEG00000015030	-	100	82.684	ENSORLG00015016270	-	100	82.468	Oryzias_latipes_hsok
ENSCSEG00000015030	-	100	83.550	ENSOMEG00000022050	-	97	96.386	Oryzias_melastigma
ENSCSEG00000015030	-	59	82.117	ENSOGAG00000027048	-	74	66.341	Otolemur_garnettii
ENSCSEG00000015030	-	57	82.955	ENSOARG00000018899	-	95	60.000	Ovis_aries
ENSCSEG00000015030	-	95	66.457	ENSPKIG00000004815	-	96	62.857	Paramormyrops_kingsleyae
ENSCSEG00000015030	-	100	64.444	ENSPKIG00000017291	-	87	63.693	Paramormyrops_kingsleyae
ENSCSEG00000015030	-	100	78.755	ENSPFOG00000004025	-	87	95.122	Poecilia_formosa
ENSCSEG00000015030	-	100	80.472	ENSPLAG00000019842	-	100	79.399	Poecilia_latipinna
ENSCSEG00000015030	-	100	78.541	ENSPMEG00000004807	-	97	79.399	Poecilia_mexicana
ENSCSEG00000015030	-	100	76.989	ENSPREG00000015599	-	89	95.122	Poecilia_reticulata
ENSCSEG00000015030	-	61	83.274	ENSPNAG00000017484	-	95	63.710	Pygocentrus_nattereri
ENSCSEG00000015030	-	59	81.818	ENSRNOG00000020438	Prpf38b	91	59.761	Rattus_norvegicus
ENSCSEG00000015030	-	86	71.499	ENSSFOG00015011251	-	81	92.308	Scleropages_formosus
ENSCSEG00000015030	-	100	86.111	ENSSLDG00000023487	-	100	87.821	Seriola_lalandi_dorsalis
ENSCSEG00000015030	-	100	79.957	ENSTRUG00000011765	-	100	81.663	Takifugu_rubripes
ENSCSEG00000015030	-	99	64.468	ENSTNIG00000015299	-	99	68.831	Tetraodon_nigroviridis
ENSCSEG00000015030	-	58	72.862	ENSTBEG00000007504	-	96	55.622	Tupaia_belangeri
ENSCSEG00000015030	-	59	82.117	ENSTTRG00000006479	-	91	61.233	Tursiops_truncatus
ENSCSEG00000015030	-	57	68.679	ENSVPAG00000005541	-	90	52.929	Vicugna_pacos
ENSCSEG00000015030	-	96	60.163	ENSXETG00000005260	prpf38b	87	62.526	Xenopus_tropicalis
ENSCSEG00000015030	-	100	79.744	ENSXCOG00000008329	-	100	79.399	Xiphophorus_couchianus
ENSCSEG00000015030	-	100	79.531	ENSXMAG00000023831	-	100	79.185	Xiphophorus_maculatus