EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000015080 (Gene tree)
Gene ID: 103380578
Gene Symbol: cnot4a
Alias: si:dkey-230e6.2
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 13107 bases
Position: chr6:18395580-18408686
Accession: 103380578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000023793	RRM_1	PF00076.22	5.4e-05	1	1
ENSCSEP00000023749	RRM_1	PF00076.22	7.2e-05	1	1
ENSCSEP00000023721	RRM_1	PF00076.22	7.6e-05	1	1
ENSCSEP00000023735	RRM_1	PF00076.22	7.6e-05	1	1
ENSCSEP00000023694	RRM_1	PF00076.22	8.1e-05	1	1
ENSCSEP00000023766	RRM_1	PF00076.22	8.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000024045	-	5346	-	ENSCSEP00000023735	807 (aa)	-	-
ENSCSET00000024111	-	1950	-	ENSCSEP00000023793	649 (aa)	-	-
ENSCSET00000024030	-	5346	-	ENSCSEP00000023721	807 (aa)	-	-
ENSCSET00000024079	-	4674	XM_008312598	ENSCSEP00000023766	838 (aa)	XP_008310820	-
ENSCSET00000024003	-	5453	-	ENSCSEP00000023694	838 (aa)	-	-
ENSCSET00000024062	-	5252	-	ENSCSEP00000023749	771 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000015080's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000015080	cnot4a	84	90.566	ENSG00000080802	CNOT4	97	89.299	Homo_sapiens
ENSCSEG00000015080	cnot4a	90	100.000	ENSAPOG00000016272	cnot4a	98	100.000	Acanthochromis_polyacanthus
ENSCSEG00000015080	cnot4a	82	86.937	ENSAMEG00000012081	CNOT4	88	89.299	Ailuropoda_melanoleuca
ENSCSEG00000015080	cnot4a	93	91.111	ENSACIG00000003011	cnot4a	87	100.000	Amphilophus_citrinellus
ENSCSEG00000015080	cnot4a	94	99.630	ENSAOCG00000010792	cnot4a	94	99.630	Amphiprion_ocellaris
ENSCSEG00000015080	cnot4a	94	99.630	ENSAPEG00000004680	cnot4a	94	99.630	Amphiprion_percula
ENSCSEG00000015080	cnot4a	94	99.630	ENSATEG00000017580	cnot4a	94	99.630	Anabas_testudineus
ENSCSEG00000015080	cnot4a	93	69.610	ENSAPLG00000016441	CNOT4	95	69.610	Anas_platyrhynchos
ENSCSEG00000015080	cnot4a	93	69.261	ENSACAG00000011154	CNOT4	95	69.261	Anolis_carolinensis
ENSCSEG00000015080	cnot4a	84	90.566	ENSANAG00000032156	CNOT4	99	89.299	Aotus_nancymaae
ENSCSEG00000015080	cnot4a	94	100.000	ENSACLG00000002514	cnot4a	95	100.000	Astatotilapia_calliptera
ENSCSEG00000015080	cnot4a	79	95.185	ENSAMXG00000001373	cnot4a	94	95.185	Astyanax_mexicanus
ENSCSEG00000015080	cnot4a	94	81.024	ENSAMXG00000011473	cnot4b	94	92.222	Astyanax_mexicanus
ENSCSEG00000015080	cnot4a	91	75.658	ENSBTAG00000017919	CNOT4	95	89.299	Bos_taurus
ENSCSEG00000015080	cnot4a	84	90.566	ENSCJAG00000012532	CNOT4	99	89.299	Callithrix_jacchus
ENSCSEG00000015080	cnot4a	84	90.566	ENSCAFG00000003223	CNOT4	94	90.566	Canis_familiaris
ENSCSEG00000015080	cnot4a	77	90.566	ENSCAFG00020000093	CNOT4	94	90.566	Canis_lupus_dingo
ENSCSEG00000015080	cnot4a	84	89.299	ENSCHIG00000010955	CNOT4	94	90.566	Capra_hircus
ENSCSEG00000015080	cnot4a	84	90.566	ENSTSYG00000000893	CNOT4	99	89.299	Carlito_syrichta
ENSCSEG00000015080	cnot4a	84	90.189	ENSCAPG00000006213	CNOT4	94	90.189	Cavia_aperea
ENSCSEG00000015080	cnot4a	84	90.566	ENSCPOG00000011526	CNOT4	94	90.566	Cavia_porcellus
ENSCSEG00000015080	cnot4a	84	89.299	ENSCCAG00000024414	CNOT4	94	94.323	Cebus_capucinus
ENSCSEG00000015080	cnot4a	84	89.299	ENSCATG00000022607	CNOT4	97	89.299	Cercocebus_atys
ENSCSEG00000015080	cnot4a	84	90.566	ENSCLAG00000001857	CNOT4	94	90.566	Chinchilla_lanigera
ENSCSEG00000015080	cnot4a	84	90.566	ENSCSAG00000009096	CNOT4	94	90.566	Chlorocebus_sabaeus
ENSCSEG00000015080	cnot4a	64	93.583	ENSCHOG00000010412	CNOT4	67	93.583	Choloepus_hoffmanni
ENSCSEG00000015080	cnot4a	88	89.299	ENSCPBG00000004959	CNOT4	95	89.299	Chrysemys_picta_bellii
ENSCSEG00000015080	cnot4a	58	67.460	ENSCING00000004364	-	61	68.699	Ciona_intestinalis
ENSCSEG00000015080	cnot4a	84	89.299	ENSCANG00000029319	CNOT4	97	89.299	Colobus_angolensis_palliatus
ENSCSEG00000015080	cnot4a	84	90.566	ENSCGRG00001014651	Cnot4	94	90.566	Cricetulus_griseus_chok1gshd
ENSCSEG00000015080	cnot4a	84	90.566	ENSCGRG00000005727	Cnot4	94	90.566	Cricetulus_griseus_crigri
ENSCSEG00000015080	cnot4a	94	98.148	ENSCVAG00000009399	cnot4a	94	97.080	Cyprinodon_variegatus
ENSCSEG00000015080	cnot4a	94	92.251	ENSDARG00000007639	cnot4b	86	92.251	Danio_rerio
ENSCSEG00000015080	cnot4a	93	77.734	ENSDARG00000007045	cnot4a	95	77.676	Danio_rerio
ENSCSEG00000015080	cnot4a	84	89.299	ENSDNOG00000009409	CNOT4	95	89.299	Dasypus_novemcinctus
ENSCSEG00000015080	cnot4a	84	90.566	ENSDORG00000012268	Cnot4	94	90.566	Dipodomys_ordii
ENSCSEG00000015080	cnot4a	88	84.133	ENSETEG00000013407	CNOT4	90	84.133	Echinops_telfairi
ENSCSEG00000015080	cnot4a	78	89.299	ENSEASG00005014430	CNOT4	94	89.299	Equus_asinus_asinus
ENSCSEG00000015080	cnot4a	84	89.299	ENSECAG00000020262	CNOT4	95	89.299	Equus_caballus
ENSCSEG00000015080	cnot4a	89	92.075	ENSELUG00000011540	cnot4b	81	92.075	Esox_lucius
ENSCSEG00000015080	cnot4a	94	94.545	ENSELUG00000008742	cnot4a	96	95.572	Esox_lucius
ENSCSEG00000015080	cnot4a	84	90.566	ENSFCAG00000011904	CNOT4	96	89.299	Felis_catus
ENSCSEG00000015080	cnot4a	93	69.909	ENSFALG00000011194	CNOT4	95	69.780	Ficedula_albicollis
ENSCSEG00000015080	cnot4a	84	90.566	ENSFDAG00000013525	CNOT4	94	90.566	Fukomys_damarensis
ENSCSEG00000015080	cnot4a	94	99.259	ENSFHEG00000006608	cnot4a	94	99.262	Fundulus_heteroclitus
ENSCSEG00000015080	cnot4a	93	76.440	ENSGMOG00000001329	cnot4a	99	76.825	Gadus_morhua
ENSCSEG00000015080	cnot4a	88	89.299	ENSGALG00000011682	CNOT4	95	89.299	Gallus_gallus
ENSCSEG00000015080	cnot4a	94	98.889	ENSGACG00000004276	cnot4a	95	98.889	Gasterosteus_aculeatus
ENSCSEG00000015080	cnot4a	88	89.299	ENSGAGG00000017331	CNOT4	95	89.299	Gopherus_agassizii
ENSCSEG00000015080	cnot4a	77	90.047	ENSGGOG00000000142	CNOT4	96	89.202	Gorilla_gorilla
ENSCSEG00000015080	cnot4a	94	100.000	ENSHBUG00000000027	cnot4a	95	100.000	Haplochromis_burtoni
ENSCSEG00000015080	cnot4a	84	90.566	ENSHGLG00000011533	CNOT4	94	90.566	Heterocephalus_glaber_female
ENSCSEG00000015080	cnot4a	81	76.782	ENSHGLG00100013058	CNOT4	94	89.299	Heterocephalus_glaber_male
ENSCSEG00000015080	cnot4a	94	90.432	ENSHCOG00000015815	cnot4a	95	98.148	Hippocampus_comes
ENSCSEG00000015080	cnot4a	94	92.251	ENSIPUG00000016994	cnot4b	94	92.222	Ictalurus_punctatus
ENSCSEG00000015080	cnot4a	94	86.755	ENSIPUG00000006393	cnot4	94	87.129	Ictalurus_punctatus
ENSCSEG00000015080	cnot4a	83	90.566	ENSSTOG00000007717	CNOT4	94	90.566	Ictidomys_tridecemlineatus
ENSCSEG00000015080	cnot4a	67	87.037	ENSJJAG00000019991	-	93	88.302	Jaculus_jaculus
ENSCSEG00000015080	cnot4a	84	90.566	ENSJJAG00000016618	Cnot4	94	90.566	Jaculus_jaculus
ENSCSEG00000015080	cnot4a	90	98.519	ENSKMAG00000004581	cnot4a	94	97.445	Kryptolebias_marmoratus
ENSCSEG00000015080	cnot4a	94	99.259	ENSLBEG00000009999	cnot4a	89	99.259	Labrus_bergylta
ENSCSEG00000015080	cnot4a	93	70.558	ENSLACG00000002647	CNOT4	98	69.546	Latimeria_chalumnae
ENSCSEG00000015080	cnot4a	94	91.575	ENSLOCG00000016126	cnot4a	87	91.575	Lepisosteus_oculatus
ENSCSEG00000015080	cnot4a	84	89.299	ENSLAFG00000000709	CNOT4	95	89.299	Loxodonta_africana
ENSCSEG00000015080	cnot4a	84	90.566	ENSMFAG00000046349	CNOT4	97	89.299	Macaca_fascicularis
ENSCSEG00000015080	cnot4a	84	89.299	ENSMMUG00000016181	CNOT4	97	89.299	Macaca_mulatta
ENSCSEG00000015080	cnot4a	84	89.299	ENSMNEG00000042164	CNOT4	97	89.299	Macaca_nemestrina
ENSCSEG00000015080	cnot4a	84	89.299	ENSMLEG00000032709	CNOT4	97	89.299	Mandrillus_leucophaeus
ENSCSEG00000015080	cnot4a	94	100.000	ENSMAMG00000023194	cnot4a	95	100.000	Mastacembelus_armatus
ENSCSEG00000015080	cnot4a	94	100.000	ENSMZEG00005007312	cnot4a	95	94.074	Maylandia_zebra
ENSCSEG00000015080	cnot4a	93	69.481	ENSMGAG00000011788	CNOT4	95	69.481	Meleagris_gallopavo
ENSCSEG00000015080	cnot4a	84	90.566	ENSMAUG00000020415	Cnot4	94	90.566	Mesocricetus_auratus
ENSCSEG00000015080	cnot4a	84	89.299	ENSMICG00000001667	CNOT4	99	89.299	Microcebus_murinus
ENSCSEG00000015080	cnot4a	84	90.566	ENSMOCG00000020955	Cnot4	94	90.566	Microtus_ochrogaster
ENSCSEG00000015080	cnot4a	79	98.889	ENSMMOG00000014565	cnot4a	95	98.889	Mola_mola
ENSCSEG00000015080	cnot4a	84	90.566	ENSMODG00000014068	CNOT4	94	90.566	Monodelphis_domestica
ENSCSEG00000015080	cnot4a	92	92.133	ENSMALG00000011662	cnot4a	89	92.133	Monopterus_albus
ENSCSEG00000015080	cnot4a	84	90.566	MGP_CAROLIEiJ_G0028217	Cnot4	94	90.566	Mus_caroli
ENSCSEG00000015080	cnot4a	84	90.566	ENSMUSG00000038784	Cnot4	94	90.566	Mus_musculus
ENSCSEG00000015080	cnot4a	84	90.566	MGP_PahariEiJ_G0021974	Cnot4	94	90.566	Mus_pahari
ENSCSEG00000015080	cnot4a	84	90.566	MGP_SPRETEiJ_G0029216	Cnot4	94	90.566	Mus_spretus
ENSCSEG00000015080	cnot4a	84	90.566	ENSMPUG00000004089	CNOT4	94	90.566	Mustela_putorius_furo
ENSCSEG00000015080	cnot4a	94	74.250	ENSMLUG00000008260	CNOT4	94	89.299	Myotis_lucifugus
ENSCSEG00000015080	cnot4a	83	90.566	ENSNGAG00000015030	Cnot4	94	90.566	Nannospalax_galili
ENSCSEG00000015080	cnot4a	94	85.984	ENSNBRG00000021144	cnot4a	94	93.704	Neolamprologus_brichardi
ENSCSEG00000015080	cnot4a	84	88.930	ENSNLEG00000013352	CNOT4	97	88.930	Nomascus_leucogenys
ENSCSEG00000015080	cnot4a	82	67.965	ENSOPRG00000001023	CNOT4	82	67.965	Ochotona_princeps
ENSCSEG00000015080	cnot4a	84	90.566	ENSODEG00000012975	CNOT4	94	90.566	Octodon_degus
ENSCSEG00000015080	cnot4a	94	100.000	ENSONIG00000008656	cnot4a	87	100.000	Oreochromis_niloticus
ENSCSEG00000015080	cnot4a	84	90.566	ENSOANG00000005006	CNOT4	94	90.566	Ornithorhynchus_anatinus
ENSCSEG00000015080	cnot4a	84	90.566	ENSOCUG00000013448	CNOT4	94	90.566	Oryctolagus_cuniculus
ENSCSEG00000015080	cnot4a	86	97.080	ENSORLG00000003727	cnot4a	94	97.080	Oryzias_latipes
ENSCSEG00000015080	cnot4a	86	97.080	ENSORLG00020015684	cnot4a	94	97.080	Oryzias_latipes_hni
ENSCSEG00000015080	cnot4a	86	97.080	ENSORLG00015008470	cnot4a	94	97.080	Oryzias_latipes_hsok
ENSCSEG00000015080	cnot4a	93	88.583	ENSOMEG00000011084	cnot4a	94	97.445	Oryzias_melastigma
ENSCSEG00000015080	cnot4a	84	89.299	ENSOGAG00000015499	CNOT4	95	89.299	Otolemur_garnettii
ENSCSEG00000015080	cnot4a	84	89.299	ENSOARG00000008803	CNOT4	95	89.299	Ovis_aries
ENSCSEG00000015080	cnot4a	84	89.299	ENSPPAG00000041937	CNOT4	97	89.299	Pan_paniscus
ENSCSEG00000015080	cnot4a	84	89.299	ENSPPRG00000023940	CNOT4	95	89.299	Panthera_pardus
ENSCSEG00000015080	cnot4a	84	90.566	ENSPTIG00000016601	CNOT4	96	89.299	Panthera_tigris_altaica
ENSCSEG00000015080	cnot4a	84	89.299	ENSPTRG00000019727	CNOT4	97	89.299	Pan_troglodytes
ENSCSEG00000015080	cnot4a	84	89.299	ENSPANG00000017724	CNOT4	97	89.299	Papio_anubis
ENSCSEG00000015080	cnot4a	94	86.316	ENSPKIG00000018137	cnot4a	91	86.316	Paramormyrops_kingsleyae
ENSCSEG00000015080	cnot4a	93	68.742	ENSPSIG00000011256	CNOT4	95	68.742	Pelodiscus_sinensis
ENSCSEG00000015080	cnot4a	94	87.025	ENSPMGG00000005671	cnot4a	94	97.037	Periophthalmus_magnuspinnatus
ENSCSEG00000015080	cnot4a	84	90.566	ENSPEMG00000021566	Cnot4	94	90.566	Peromyscus_maniculatus_bairdii
ENSCSEG00000015080	cnot4a	84	90.566	ENSPCIG00000029622	CNOT4	90	90.566	Phascolarctos_cinereus
ENSCSEG00000015080	cnot4a	94	99.259	ENSPFOG00000002228	cnot4a	87	99.259	Poecilia_formosa
ENSCSEG00000015080	cnot4a	94	99.259	ENSPLAG00000001780	cnot4a	94	98.175	Poecilia_latipinna
ENSCSEG00000015080	cnot4a	94	99.259	ENSPMEG00000006852	cnot4a	94	98.175	Poecilia_mexicana
ENSCSEG00000015080	cnot4a	94	99.259	ENSPREG00000008171	cnot4a	95	96.043	Poecilia_reticulata
ENSCSEG00000015080	cnot4a	84	90.566	ENSPPYG00000018026	CNOT4	94	90.566	Pongo_abelii
ENSCSEG00000015080	cnot4a	84	89.299	ENSPCOG00000019907	CNOT4	99	89.299	Propithecus_coquereli
ENSCSEG00000015080	cnot4a	88	70.857	ENSPVAG00000004905	CNOT4	88	89.299	Pteropus_vampyrus
ENSCSEG00000015080	cnot4a	94	100.000	ENSPNYG00000004276	cnot4a	94	94.074	Pundamilia_nyererei
ENSCSEG00000015080	cnot4a	94	87.086	ENSPNAG00000020433	cnot4a	95	94.444	Pygocentrus_nattereri
ENSCSEG00000015080	cnot4a	85	92.593	ENSPNAG00000008679	cnot4b	94	92.593	Pygocentrus_nattereri
ENSCSEG00000015080	cnot4a	84	90.566	ENSRNOG00000010795	Cnot4	94	90.566	Rattus_norvegicus
ENSCSEG00000015080	cnot4a	84	89.299	ENSRBIG00000043977	CNOT4	97	89.299	Rhinopithecus_bieti
ENSCSEG00000015080	cnot4a	84	90.566	ENSSBOG00000020808	CNOT4	99	89.299	Saimiri_boliviensis_boliviensis
ENSCSEG00000015080	cnot4a	84	90.566	ENSSHAG00000013639	CNOT4	94	90.566	Sarcophilus_harrisii
ENSCSEG00000015080	cnot4a	94	91.756	ENSSFOG00015017285	CNOT4	94	93.066	Scleropages_formosus
ENSCSEG00000015080	cnot4a	94	83.828	ENSSFOG00015002019	cnot4a	94	91.481	Scleropages_formosus
ENSCSEG00000015080	cnot4a	94	100.000	ENSSMAG00000008614	cnot4a	94	100.000	Scophthalmus_maximus
ENSCSEG00000015080	cnot4a	76	93.284	ENSSDUG00000018585	cnot4b	94	93.284	Seriola_dumerili
ENSCSEG00000015080	cnot4a	94	100.000	ENSSDUG00000022635	cnot4a	95	100.000	Seriola_dumerili
ENSCSEG00000015080	cnot4a	93	63.165	ENSSLDG00000014347	cnot4b	96	62.069	Seriola_lalandi_dorsalis
ENSCSEG00000015080	cnot4a	94	100.000	ENSSLDG00000015770	cnot4a	94	100.000	Seriola_lalandi_dorsalis
ENSCSEG00000015080	cnot4a	79	89.299	ENSSPUG00000004677	CNOT4	94	89.299	Sphenodon_punctatus
ENSCSEG00000015080	cnot4a	94	100.000	ENSSPAG00000012329	cnot4a	94	100.000	Stegastes_partitus
ENSCSEG00000015080	cnot4a	84	89.299	ENSSSCG00000021354	CNOT4	98	90.566	Sus_scrofa
ENSCSEG00000015080	cnot4a	93	69.870	ENSTGUG00000009161	CNOT4	95	69.870	Taeniopygia_guttata
ENSCSEG00000015080	cnot4a	94	98.519	ENSTRUG00000016861	cnot4a	94	98.519	Takifugu_rubripes
ENSCSEG00000015080	cnot4a	85	91.882	ENSTNIG00000016000	cnot4a	94	91.882	Tetraodon_nigroviridis
ENSCSEG00000015080	cnot4a	85	71.777	ENSTBEG00000002202	CNOT4	87	83.764	Tupaia_belangeri
ENSCSEG00000015080	cnot4a	88	72.532	ENSTTRG00000005122	CNOT4	88	89.299	Tursiops_truncatus
ENSCSEG00000015080	cnot4a	78	89.299	ENSUAMG00000026759	CNOT4	94	89.299	Ursus_americanus
ENSCSEG00000015080	cnot4a	84	89.299	ENSUMAG00000015351	CNOT4	94	89.299	Ursus_maritimus
ENSCSEG00000015080	cnot4a	84	89.299	ENSVVUG00000006200	CNOT4	94	90.566	Vulpes_vulpes
ENSCSEG00000015080	cnot4a	94	89.259	ENSXETG00000010594	cnot4	87	89.259	Xenopus_tropicalis
ENSCSEG00000015080	cnot4a	77	97.810	ENSXCOG00000020824	cnot4a	98	97.810	Xiphophorus_couchianus
ENSCSEG00000015080	cnot4a	94	98.519	ENSXMAG00000016984	cnot4a	95	97.445	Xiphophorus_maculatus