EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000015238 (Gene tree)
Gene ID: 103394869
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: secretion associated Ras related GTPase 1B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 1961 bases
Position: chr19:3352145-3354105
Accession: 103394869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000023901	MMR_HSR1	PF01926.23	5.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000024221	-	612	XM_008332322	ENSCSEP00000023901	203 (aa)	XP_008330544	-

Gene Model

Click here to download ENSCSEG00000015238's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000015238	sar1b	89	30.978	ENSCSEG00000005784	ARL6	92	30.978
ENSCSEG00000015238	sar1b	70	30.282	ENSCSEG00000007217	-	77	30.282
ENSCSEG00000015238	sar1b	59	33.871	ENSCSEG00000007479	ARL4A	68	32.593
ENSCSEG00000015238	sar1b	86	31.868	ENSCSEG00000012307	-	84	31.868
ENSCSEG00000015238	sar1b	84	30.409	ENSCSEG00000016811	arl2	86	30.409
ENSCSEG00000015238	sar1b	70	30.282	ENSCSEG00000003101	arf3b	77	30.282
ENSCSEG00000015238	sar1b	74	32.051	ENSCSEG00000000838	arl4cb	69	32.051
ENSCSEG00000015238	sar1b	59	33.871	ENSCSEG00000014890	arl4aa	69	32.593
ENSCSEG00000015238	sar1b	59	34.400	ENSCSEG00000005387	-	66	34.400
ENSCSEG00000015238	sar1b	90	82.967	ENSCSEG00000004825	sar1ab	92	82.967
ENSCSEG00000015238	sar1b	68	30.496	ENSCSEG00000018609	arl8a	80	30.496
ENSCSEG00000015238	sar1b	89	30.978	ENSCSEG00000006004	arf5	94	30.978
ENSCSEG00000015238	sar1b	83	32.353	ENSCSEG00000017926	-	78	32.353
ENSCSEG00000015238	sar1b	64	31.818	ENSCSEG00000014248	-	62	31.818
ENSCSEG00000015238	sar1b	64	32.353	ENSCSEG00000010194	-	67	32.353
ENSCSEG00000015238	sar1b	59	30.000	ENSCSEG00000003442	arl5a	73	30.000
ENSCSEG00000015238	sar1b	98	79.602	ENSCSEG00000016976	-	100	80.303
ENSCSEG00000015238	sar1b	53	35.780	ENSCSEG00000013136	-	59	35.780

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000015238	sar1b	97	79.798	ENSAPOG00000017891	-	100	79.798	Acanthochromis_polyacanthus
ENSCSEG00000015238	sar1b	97	88.889	ENSAPOG00000007186	sar1b	100	88.889	Acanthochromis_polyacanthus
ENSCSEG00000015238	sar1b	90	84.066	ENSACIG00000024513	-	92	84.066	Amphilophus_citrinellus
ENSCSEG00000015238	sar1b	97	88.889	ENSACIG00000013634	sar1b	100	88.889	Amphilophus_citrinellus
ENSCSEG00000015238	sar1b	97	79.798	ENSAOCG00000002627	-	100	79.798	Amphiprion_ocellaris
ENSCSEG00000015238	sar1b	97	88.889	ENSAOCG00000005888	sar1b	100	88.889	Amphiprion_ocellaris
ENSCSEG00000015238	sar1b	97	79.798	ENSAPEG00000019680	-	100	79.798	Amphiprion_percula
ENSCSEG00000015238	sar1b	97	88.889	ENSAPEG00000022771	sar1b	100	88.889	Amphiprion_percula
ENSCSEG00000015238	sar1b	97	87.374	ENSATEG00000012904	sar1b	100	87.374	Anabas_testudineus
ENSCSEG00000015238	sar1b	97	78.283	ENSATEG00000023368	-	100	78.283	Anabas_testudineus
ENSCSEG00000015238	sar1b	97	84.343	ENSACAG00000001470	-	100	84.343	Anolis_carolinensis
ENSCSEG00000015238	sar1b	97	79.798	ENSACLG00000005011	-	100	79.798	Astatotilapia_calliptera
ENSCSEG00000015238	sar1b	97	88.384	ENSACLG00000014649	sar1b	100	88.384	Astatotilapia_calliptera
ENSCSEG00000015238	sar1b	100	79.310	ENSAMXG00000034192	-	91	79.310	Astyanax_mexicanus
ENSCSEG00000015238	sar1b	57	82.906	ENSAMXG00000018108	sar1b	84	82.906	Astyanax_mexicanus
ENSCSEG00000015238	sar1b	97	86.869	ENSCVAG00000022959	sar1b	100	86.869	Cyprinodon_variegatus
ENSCSEG00000015238	sar1b	97	87.374	ENSDARG00000103403	sar1b	100	87.374	Danio_rerio
ENSCSEG00000015238	sar1b	89	73.481	FBgn0038947	Sar1	94	73.481	Drosophila_melanogaster
ENSCSEG00000015238	sar1b	93	84.293	ENSEBUG00000011723	sar1b	97	84.293	Eptatretus_burgeri
ENSCSEG00000015238	sar1b	97	86.869	ENSELUG00000020912	sar1b	100	86.869	Esox_lucius
ENSCSEG00000015238	sar1b	97	86.364	ENSFHEG00000019865	sar1b	100	86.364	Fundulus_heteroclitus
ENSCSEG00000015238	sar1b	97	86.364	ENSGMOG00000008023	sar1b	100	86.364	Gadus_morhua
ENSCSEG00000015238	sar1b	97	85.354	ENSGAFG00000007081	sar1b	100	85.354	Gambusia_affinis
ENSCSEG00000015238	sar1b	95	86.667	ENSGACG00000001474	sar1b	98	86.667	Gasterosteus_aculeatus
ENSCSEG00000015238	sar1b	97	88.384	ENSHBUG00000000915	sar1b	100	88.384	Haplochromis_burtoni
ENSCSEG00000015238	sar1b	97	79.798	ENSHBUG00000018397	-	100	79.798	Haplochromis_burtoni
ENSCSEG00000015238	sar1b	97	86.364	ENSHCOG00000010953	sar1b	100	86.364	Hippocampus_comes
ENSCSEG00000015238	sar1b	97	85.859	ENSIPUG00000020925	sar1b	100	85.859	Ictalurus_punctatus
ENSCSEG00000015238	sar1b	100	78.818	ENSIPUG00000010046	sar1b	100	78.818	Ictalurus_punctatus
ENSCSEG00000015238	sar1b	97	87.879	ENSKMAG00000019693	sar1b	100	87.879	Kryptolebias_marmoratus
ENSCSEG00000015238	sar1b	97	77.778	ENSKMAG00000014875	-	100	77.778	Kryptolebias_marmoratus
ENSCSEG00000015238	sar1b	97	85.354	ENSLBEG00000027550	sar1b	100	85.354	Labrus_bergylta
ENSCSEG00000015238	sar1b	97	80.303	ENSLBEG00000016945	-	100	80.303	Labrus_bergylta
ENSCSEG00000015238	sar1b	90	87.912	ENSLACG00000010795	sar1b	92	87.912	Latimeria_chalumnae
ENSCSEG00000015238	sar1b	100	70.588	ENSLACG00000017029	-	98	70.588	Latimeria_chalumnae
ENSCSEG00000015238	sar1b	97	83.838	ENSLOCG00000005214	-	100	83.838	Lepisosteus_oculatus
ENSCSEG00000015238	sar1b	97	86.364	ENSLOCG00000010197	sar1b	100	86.364	Lepisosteus_oculatus
ENSCSEG00000015238	sar1b	97	86.869	ENSMAMG00000021732	sar1b	100	86.869	Mastacembelus_armatus
ENSCSEG00000015238	sar1b	97	79.798	ENSMZEG00005001012	-	100	79.798	Maylandia_zebra
ENSCSEG00000015238	sar1b	97	88.384	ENSMZEG00005008942	sar1b	100	88.384	Maylandia_zebra
ENSCSEG00000015238	sar1b	88	90.503	ENSMGAG00000005387	-	91	90.503	Meleagris_gallopavo
ENSCSEG00000015238	sar1b	97	79.293	ENSMMOG00000013803	-	100	79.293	Mola_mola
ENSCSEG00000015238	sar1b	97	87.374	ENSMALG00000016635	sar1b	97	90.710	Monopterus_albus
ENSCSEG00000015238	sar1b	97	79.798	ENSNBRG00000014004	-	100	79.798	Neolamprologus_brichardi
ENSCSEG00000015238	sar1b	97	88.384	ENSNBRG00000008013	sar1b	100	88.384	Neolamprologus_brichardi
ENSCSEG00000015238	sar1b	97	89.394	ENSONIG00000017278	sar1b	100	89.394	Oreochromis_niloticus
ENSCSEG00000015238	sar1b	97	86.364	ENSORLG00000000932	sar1b	100	86.364	Oryzias_latipes
ENSCSEG00000015238	sar1b	97	86.364	ENSORLG00020021985	sar1b	100	86.364	Oryzias_latipes_hni
ENSCSEG00000015238	sar1b	97	86.364	ENSORLG00015007044	sar1b	100	86.364	Oryzias_latipes_hsok
ENSCSEG00000015238	sar1b	97	86.869	ENSOMEG00000001052	sar1b	100	86.869	Oryzias_melastigma
ENSCSEG00000015238	sar1b	97	85.354	ENSPKIG00000010688	sar1b	100	85.354	Paramormyrops_kingsleyae
ENSCSEG00000015238	sar1b	97	85.354	ENSPKIG00000017353	-	100	85.354	Paramormyrops_kingsleyae
ENSCSEG00000015238	sar1b	56	84.483	ENSPMGG00000001234	sar1b	91	84.483	Periophthalmus_magnuspinnatus
ENSCSEG00000015238	sar1b	90	84.865	ENSPMAG00000003593	sar1b	92	84.865	Petromyzon_marinus
ENSCSEG00000015238	sar1b	97	85.354	ENSPFOG00000005666	sar1b	100	85.354	Poecilia_formosa
ENSCSEG00000015238	sar1b	57	78.632	ENSPLAG00000001016	-	65	88.119	Poecilia_latipinna
ENSCSEG00000015238	sar1b	97	85.859	ENSPLAG00000012223	sar1b	100	85.859	Poecilia_latipinna
ENSCSEG00000015238	sar1b	97	85.354	ENSPMEG00000016831	sar1b	100	85.354	Poecilia_mexicana
ENSCSEG00000015238	sar1b	50	87.255	ENSPREG00000002020	-	76	87.255	Poecilia_reticulata
ENSCSEG00000015238	sar1b	97	85.354	ENSPREG00000005312	sar1b	90	85.354	Poecilia_reticulata
ENSCSEG00000015238	sar1b	97	79.798	ENSPNYG00000021357	-	100	79.798	Pundamilia_nyererei
ENSCSEG00000015238	sar1b	97	88.384	ENSPNYG00000012440	sar1b	100	88.384	Pundamilia_nyererei
ENSCSEG00000015238	sar1b	100	80.296	ENSPNAG00000001123	-	100	80.296	Pygocentrus_nattereri
ENSCSEG00000015238	sar1b	97	86.869	ENSPNAG00000014683	sar1b	100	86.869	Pygocentrus_nattereri
ENSCSEG00000015238	sar1b	97	86.364	ENSSFOG00015020051	sar1b	100	86.364	Scleropages_formosus
ENSCSEG00000015238	sar1b	97	85.859	ENSSFOG00015018128	-	100	85.859	Scleropages_formosus
ENSCSEG00000015238	sar1b	98	79.602	ENSSMAG00000002165	-	100	80.303	Scophthalmus_maximus
ENSCSEG00000015238	sar1b	100	86.207	ENSSMAG00000007106	sar1b	80	86.207	Scophthalmus_maximus
ENSCSEG00000015238	sar1b	97	89.899	ENSSDUG00000020926	sar1b	100	89.899	Seriola_dumerili
ENSCSEG00000015238	sar1b	97	79.293	ENSSDUG00000019629	-	100	79.293	Seriola_dumerili
ENSCSEG00000015238	sar1b	97	89.899	ENSSLDG00000017052	sar1b	100	89.899	Seriola_lalandi_dorsalis
ENSCSEG00000015238	sar1b	97	79.293	ENSSLDG00000024197	-	100	79.293	Seriola_lalandi_dorsalis
ENSCSEG00000015238	sar1b	97	83.838	ENSSPUG00000010247	-	100	83.838	Sphenodon_punctatus
ENSCSEG00000015238	sar1b	97	88.384	ENSSPAG00000017634	sar1b	100	88.384	Stegastes_partitus
ENSCSEG00000015238	sar1b	97	79.293	ENSSPAG00000015626	-	100	79.293	Stegastes_partitus
ENSCSEG00000015238	sar1b	90	89.011	ENSTRUG00000023908	sar1b	92	89.011	Takifugu_rubripes
ENSCSEG00000015238	sar1b	97	84.343	ENSTNIG00000016097	sar1b	100	84.343	Tetraodon_nigroviridis
ENSCSEG00000015238	sar1b	88	91.011	ENSXCOG00000004160	sar1b	87	91.011	Xiphophorus_couchianus
ENSCSEG00000015238	sar1b	51	85.437	ENSXCOG00000006154	-	69	85.437	Xiphophorus_couchianus
ENSCSEG00000015238	sar1b	97	85.354	ENSXMAG00000008294	sar1b	100	85.354	Xiphophorus_maculatus