EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000015241 (Gene tree)
Gene ID
103394269
Gene Symbol
-
Alias
-
Full Name
polyadenylate-binding protein 1-like
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Plus strand
Length
7312 bases
Position
chr18:9240169-9247480
Accession
103394269
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000023905PABPPF00658.186.8e-3211
ENSCSEP00000023905RRM_5PF13893.62.7e-0811
ENSCSEP00000023905RRM_1PF00076.221e-8814
ENSCSEP00000023905RRM_1PF00076.221e-8824
ENSCSEP00000023905RRM_1PF00076.221e-8834
ENSCSEP00000023905RRM_1PF00076.221e-8844
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000024225-3134XM_008331499ENSCSEP00000023905633 (aa)XP_008329721UPI000497B05B
Gene Model
Click here to download ENSCSEG00000015241's gene model file
Pathways
Pathway IDPathway NameSource
csem03013RNA transportKEGG
csem03015mRNA surveillance pathwayKEGG
csem03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015241's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000015241-5639.189ENSCSEG00000017436rbm196239.189
ENSCSEG00000015241-5832.955ENSCSEG00000008675celf19932.955
ENSCSEG00000015241-5936.145ENSCSEG00000020141elavl48436.145
ENSCSEG00000015241-5630.519ENSCSEG00000003790rbms2a5230.519
ENSCSEG00000015241-5632.298ENSCSEG00000015089ncl5132.298
ENSCSEG00000015241-5730.952ENSCSEG00000000688-8930.952
ENSCSEG00000015241-5937.349ENSCSEG00000006335elavl28537.349
ENSCSEG00000015241-9975.000ENSCSEG00000000130pabpc49875.475
ENSCSEG00000015241-9988.661ENSCSEG00000013324pabpc1a10088.661
ENSCSEG00000015241-9866.559ENSCSEG00000021295pabpc1l9966.559
ENSCSEG00000015241-8430.189ENSCSEG00000010011RBMS38330.189
ENSCSEG00000015241-5730.108ENSCSEG00000010018-6830.108
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000015241-5879.082ENSG00000186288PABPC1L2A9879.082Homo_sapiens
ENSCSEG00000015241-5879.082ENSG00000184388PABPC1L2B9879.082Homo_sapiens
ENSCSEG00000015241-10091.798ENSAPOG00000017776pabpc1b10091.798Acanthochromis_polyacanthus
ENSCSEG00000015241-10088.871ENSAPOG00000015105pabpc1a10088.871Acanthochromis_polyacanthus
ENSCSEG00000015241-5879.082ENSAMEG00000019441-9879.082Ailuropoda_melanoleuca
ENSCSEG00000015241-10086.929ENSACIG00000018366pabpc1b10086.929Amphilophus_citrinellus
ENSCSEG00000015241-10088.871ENSACIG00000004685pabpc1a10088.871Amphilophus_citrinellus
ENSCSEG00000015241-10088.558ENSAOCG00000011656pabpc1a10088.558Amphiprion_ocellaris
ENSCSEG00000015241-10091.483ENSAOCG00000019839pabpc1b10091.483Amphiprion_ocellaris
ENSCSEG00000015241-10091.483ENSAPEG00000010435pabpc1b10091.483Amphiprion_percula
ENSCSEG00000015241-10088.558ENSAPEG00000006963pabpc1a10088.558Amphiprion_percula
ENSCSEG00000015241-10091.195ENSATEG00000012917pabpc1b10091.195Anabas_testudineus
ENSCSEG00000015241-10088.871ENSATEG00000024852pabpc1a10088.871Anabas_testudineus
ENSCSEG00000015241-5879.082ENSANAG00000019431-9879.082Aotus_nancymaae
ENSCSEG00000015241-5879.082ENSANAG00000019429-9879.082Aotus_nancymaae
ENSCSEG00000015241-10090.694ENSACLG00000014335pabpc1b10090.694Astatotilapia_calliptera
ENSCSEG00000015241-10088.871ENSACLG00000009399pabpc1a10091.743Astatotilapia_calliptera
ENSCSEG00000015241-10090.866ENSAMXG00000008599pabpc1b10091.024Astyanax_mexicanus
ENSCSEG00000015241-5976.077ENSBTAG00000052491-9876.077Bos_taurus
ENSCSEG00000015241-5978.049ENSBTAG00000050902-9878.049Bos_taurus
ENSCSEG00000015241-5879.082ENSCJAG00000041326-9879.082Callithrix_jacchus
ENSCSEG00000015241-5978.049ENSCAFG00020002052-9878.049Canis_lupus_dingo
ENSCSEG00000015241-5879.082ENSCHIG00000006283-9879.082Capra_hircus
ENSCSEG00000015241-5879.082ENSCHIG00000011138-9879.082Capra_hircus
ENSCSEG00000015241-5879.082ENSTSYG00000001775-9879.082Carlito_syrichta
ENSCSEG00000015241-5879.082ENSCPOG00000009525-9879.082Cavia_porcellus
ENSCSEG00000015241-5879.082ENSCCAG00000031524-9879.082Cebus_capucinus
ENSCSEG00000015241-5879.082ENSCATG00000043125-9879.082Cercocebus_atys
ENSCSEG00000015241-5879.082ENSCATG00000042826-9879.082Cercocebus_atys
ENSCSEG00000015241-5877.041ENSCLAG00000017409-9877.041Chinchilla_lanigera
ENSCSEG00000015241-5877.041ENSCLAG00000017412-9877.041Chinchilla_lanigera
ENSCSEG00000015241-5879.082ENSCSAG00000000102-9879.082Chlorocebus_sabaeus
ENSCSEG00000015241-5879.006ENSCGRG00001023387-9676.410Cricetulus_griseus_chok1gshd
ENSCSEG00000015241-10088.976ENSCVAG00000005489pabpc1b10088.976Cyprinodon_variegatus
ENSCSEG00000015241-10088.558ENSCVAG00000021872pabpc1a10088.558Cyprinodon_variegatus
ENSCSEG00000015241-10088.836ENSDARG00000017219pabpc1a10089.465Danio_rerio
ENSCSEG00000015241-10091.024ENSDARG00000021140pabpc1b9992.199Danio_rerio
ENSCSEG00000015241-5879.365ENSDNOG00000030926-9877.551Dasypus_novemcinctus
ENSCSEG00000015241-5876.531ENSDORG00000011362-9876.531Dipodomys_ordii
ENSCSEG00000015241-5977.670ENSEASG00005010399-9877.670Equus_asinus_asinus
ENSCSEG00000015241-5977.670ENSECAG00000002620-9877.670Equus_caballus
ENSCSEG00000015241-5975.000ENSEEUG00000008203-9875.000Erinaceus_europaeus
ENSCSEG00000015241-9989.308ENSELUG00000003614pabpc1a10089.308Esox_lucius
ENSCSEG00000015241-5958.621ENSELUG00000005389-9758.621Esox_lucius
ENSCSEG00000015241-10089.639ENSELUG00000015062-10089.639Esox_lucius
ENSCSEG00000015241-5879.082ENSFCAG00000039701-9879.082Felis_catus
ENSCSEG00000015241-5879.082ENSFDAG00000005484-9879.082Fukomys_damarensis
ENSCSEG00000015241-10090.694ENSFHEG00000008186pabpc1b10090.694Fundulus_heteroclitus
ENSCSEG00000015241-10089.028ENSFHEG00000018979pabpc1a10089.028Fundulus_heteroclitus
ENSCSEG00000015241-10083.178ENSGMOG00000002448-10083.178Gadus_morhua
ENSCSEG00000015241-9987.771ENSGMOG00000013448pabpc1a9987.771Gadus_morhua
ENSCSEG00000015241-10088.715ENSGAFG00000019750pabpc1a10088.750Gambusia_affinis
ENSCSEG00000015241-10090.852ENSGAFG00000010193pabpc1b10090.852Gambusia_affinis
ENSCSEG00000015241-10089.498ENSGACG00000003572pabpc1a10089.498Gasterosteus_aculeatus
ENSCSEG00000015241-10089.252ENSGACG00000003771pabpc1b10089.408Gasterosteus_aculeatus
ENSCSEG00000015241-5879.082ENSGGOG00000043933-9879.082Gorilla_gorilla
ENSCSEG00000015241-5879.082ENSGGOG00000038606-9879.082Gorilla_gorilla
ENSCSEG00000015241-10088.871ENSHBUG00000020487pabpc1a10091.743Haplochromis_burtoni
ENSCSEG00000015241-10090.694ENSHBUG00000002075pabpc1b10090.694Haplochromis_burtoni
ENSCSEG00000015241-5878.061ENSHGLG00000019762-9878.061Heterocephalus_glaber_female
ENSCSEG00000015241-5878.061ENSHGLG00000019668-9878.061Heterocephalus_glaber_female
ENSCSEG00000015241-5878.061ENSHGLG00100020854-9878.061Heterocephalus_glaber_male
ENSCSEG00000015241-9182.609ENSHCOG00000003175pabpc1b9982.609Hippocampus_comes
ENSCSEG00000015241-10088.245ENSHCOG00000013502pabpc1a10088.245Hippocampus_comes
ENSCSEG00000015241-10085.984ENSIPUG00000008848pabpc1a10086.094Ictalurus_punctatus
ENSCSEG00000015241-8156.716ENSIPUG00000018724-8756.716Ictalurus_punctatus
ENSCSEG00000015241-10085.174ENSIPUG00000010791-10085.174Ictalurus_punctatus
ENSCSEG00000015241-6063.255ENSIPUG00000021244-5563.255Ictalurus_punctatus
ENSCSEG00000015241-5878.571ENSSTOG00000026028-9878.571Ictidomys_tridecemlineatus
ENSCSEG00000015241-5878.571ENSSTOG00000022096-9878.571Ictidomys_tridecemlineatus
ENSCSEG00000015241-5877.551ENSJJAG00000007037-9877.551Jaculus_jaculus
ENSCSEG00000015241-10088.245ENSKMAG00000000605pabpc1a10088.245Kryptolebias_marmoratus
ENSCSEG00000015241-10090.063ENSKMAG00000008049pabpc1b10090.221Kryptolebias_marmoratus
ENSCSEG00000015241-10091.325ENSLBEG00000026845pabpc1b10091.325Labrus_bergylta
ENSCSEG00000015241-10089.028ENSLBEG00000024002-10089.028Labrus_bergylta
ENSCSEG00000015241-5878.462ENSLAFG00000023096-9878.462Loxodonta_africana
ENSCSEG00000015241-5878.680ENSMFAG00000028878-9878.680Macaca_fascicularis
ENSCSEG00000015241-5879.082ENSMMUG00000039929-9879.082Macaca_mulatta
ENSCSEG00000015241-5879.082ENSMMUG00000037681-9879.082Macaca_mulatta
ENSCSEG00000015241-5879.082ENSMMUG00000009740-9879.082Macaca_mulatta
ENSCSEG00000015241-5879.082ENSMNEG00000037732-9879.082Macaca_nemestrina
ENSCSEG00000015241-5879.082ENSMLEG00000027495-9879.082Mandrillus_leucophaeus
ENSCSEG00000015241-10091.167ENSMAMG00000014610pabpc1b10091.167Mastacembelus_armatus
ENSCSEG00000015241-9989.474ENSMAMG00000004502-10089.474Mastacembelus_armatus
ENSCSEG00000015241-10088.871ENSMZEG00005025416pabpc1a10091.743Maylandia_zebra
ENSCSEG00000015241-10090.694ENSMZEG00005026745pabpc1b10090.694Maylandia_zebra
ENSCSEG00000015241-5879.082ENSMICG00000047642-9879.082Microcebus_murinus
ENSCSEG00000015241-9988.787ENSMMOG00000018044pabpc1a10088.787Mola_mola
ENSCSEG00000015241-10085.624ENSMMOG00000018009pabpc1b10085.782Mola_mola
ENSCSEG00000015241-9864.753ENSMODG00000015024-9864.753Monodelphis_domestica
ENSCSEG00000015241-9972.414ENSMODG00000013156-9972.913Monodelphis_domestica
ENSCSEG00000015241-10086.120ENSMALG00000006066pabpc1b10086.278Monopterus_albus
ENSCSEG00000015241-10088.401ENSMALG00000013020-10088.871Monopterus_albus
ENSCSEG00000015241-5880.874ENSNGAG00000012688-9877.551Nannospalax_galili
ENSCSEG00000015241-10090.694ENSNBRG00000013737pabpc1b10090.694Neolamprologus_brichardi
ENSCSEG00000015241-10089.028ENSNBRG00000003068-10091.743Neolamprologus_brichardi
ENSCSEG00000015241-5879.082ENSNLEG00000018128-9879.082Nomascus_leucogenys
ENSCSEG00000015241-5878.571ENSODEG00000018540-9878.571Octodon_degus
ENSCSEG00000015241-10090.379ENSONIG00000002717pabpc1b10090.379Oreochromis_niloticus
ENSCSEG00000015241-10088.558ENSONIG00000006871-10088.558Oreochromis_niloticus
ENSCSEG00000015241-5879.082ENSOCUG00000002565-9879.082Oryctolagus_cuniculus
ENSCSEG00000015241-10087.774ENSORLG00000002691pabpc1a9694.595Oryzias_latipes
ENSCSEG00000015241-10084.858ENSORLG00000003008-10084.858Oryzias_latipes
ENSCSEG00000015241-10087.931ENSORLG00020022398pabpc1a10087.931Oryzias_latipes_hni
ENSCSEG00000015241-10084.858ENSORLG00020022259-10084.858Oryzias_latipes_hni
ENSCSEG00000015241-10087.774ENSORLG00015013633pabpc110087.774Oryzias_latipes_hsok
ENSCSEG00000015241-10085.016ENSORLG00015010932-10085.016Oryzias_latipes_hsok
ENSCSEG00000015241-9482.609ENSOMEG00000013627pabpc1b10082.609Oryzias_melastigma
ENSCSEG00000015241-10088.401ENSOMEG00000020219pabpc1a10088.401Oryzias_melastigma
ENSCSEG00000015241-5879.082ENSOGAG00000026047-9879.082Otolemur_garnettii
ENSCSEG00000015241-5879.082ENSOGAG00000029513-9879.082Otolemur_garnettii
ENSCSEG00000015241-5879.082ENSOARG00000005943-9879.082Ovis_aries
ENSCSEG00000015241-5879.082ENSPPAG00000012920-9879.082Pan_paniscus
ENSCSEG00000015241-5879.082ENSPPRG00000011804-9879.082Panthera_pardus
ENSCSEG00000015241-5879.082ENSPPRG00000011809-9879.082Panthera_pardus
ENSCSEG00000015241-5879.082ENSPTRG00000028252-9879.082Pan_troglodytes
ENSCSEG00000015241-5879.082ENSPANG00000011549-9879.082Papio_anubis
ENSCSEG00000015241-10091.024ENSPKIG00000005676pabpc1b10091.024Paramormyrops_kingsleyae
ENSCSEG00000015241-7091.928ENSPMGG00000022487pabpc1a9291.928Periophthalmus_magnuspinnatus
ENSCSEG00000015241-7192.617ENSPMGG00000023134-9792.617Periophthalmus_magnuspinnatus
ENSCSEG00000015241-9871.613ENSPCIG00000016995-5471.613Phascolarctos_cinereus
ENSCSEG00000015241-10087.385ENSPFOG00000010815pabpc1a10087.385Poecilia_formosa
ENSCSEG00000015241-10090.694ENSPFOG00000005917pabpc1b10090.694Poecilia_formosa
ENSCSEG00000015241-10088.871ENSPLAG00000004114pabpc1a10088.871Poecilia_latipinna
ENSCSEG00000015241-10091.009ENSPLAG00000001388pabpc1b10091.009Poecilia_latipinna
ENSCSEG00000015241-10088.871ENSPMEG00000001334pabpc1a10088.871Poecilia_mexicana
ENSCSEG00000015241-10090.694ENSPMEG00000014399pabpc1b10090.694Poecilia_mexicana
ENSCSEG00000015241-10091.009ENSPREG00000010911pabpc1b10091.009Poecilia_reticulata
ENSCSEG00000015241-10086.180ENSPREG00000019595pabpc1a10095.192Poecilia_reticulata
ENSCSEG00000015241-5879.082ENSPPYG00000020468-9879.082Pongo_abelii
ENSCSEG00000015241-5979.082ENSPCAG00000005308-9879.082Procavia_capensis
ENSCSEG00000015241-5878.571ENSPCOG00000026349-9878.571Propithecus_coquereli
ENSCSEG00000015241-5979.487ENSPVAG00000016117-9879.487Pteropus_vampyrus
ENSCSEG00000015241-10090.694ENSPNYG00000012578pabpc1b10090.694Pundamilia_nyererei
ENSCSEG00000015241-10088.871ENSPNYG00000005192pabpc1a10088.871Pundamilia_nyererei
ENSCSEG00000015241-10090.709ENSPNAG00000024626pabpc1b10090.866Pygocentrus_nattereri
ENSCSEG00000015241-10087.736ENSPNAG00000028408pabpc1a10087.736Pygocentrus_nattereri
ENSCSEG00000015241-5879.082ENSRBIG00000027173-9879.082Rhinopithecus_bieti
ENSCSEG00000015241-8686.946ENSRBIG00000028738-9386.946Rhinopithecus_bieti
ENSCSEG00000015241-5879.082ENSRROG00000017404-9879.082Rhinopithecus_roxellana
ENSCSEG00000015241-9862.963ENSSHAG00000000511-10062.963Sarcophilus_harrisii
ENSCSEG00000015241-6478.613ENSSFOG00015019668-7778.613Scleropages_formosus
ENSCSEG00000015241-10087.402ENSSFOG00015006662pabpc1a10087.402Scleropages_formosus
ENSCSEG00000015241-10090.694ENSSFOG00015002752-10090.694Scleropages_formosus
ENSCSEG00000015241-10091.483ENSSMAG00000006869pabpc1b10091.483Scophthalmus_maximus
ENSCSEG00000015241-10088.558ENSSMAG00000010803pabpc1a10088.558Scophthalmus_maximus
ENSCSEG00000015241-10089.028ENSSDUG00000006675pabpc1a10089.028Seriola_dumerili
ENSCSEG00000015241-10090.221ENSSDUG00000011965pabpc1b10090.221Seriola_dumerili
ENSCSEG00000015241-10089.028ENSSLDG00000011661pabpc1a10089.028Seriola_lalandi_dorsalis
ENSCSEG00000015241-10091.862ENSSLDG00000014156pabpc1b10091.862Seriola_lalandi_dorsalis
ENSCSEG00000015241-10091.956ENSSPAG00000019265pabpc1b10091.956Stegastes_partitus
ENSCSEG00000015241-10089.028ENSSPAG00000014453-10089.028Stegastes_partitus
ENSCSEG00000015241-5879.082ENSSSCG00000032167-9879.082Sus_scrofa
ENSCSEG00000015241-5879.082ENSSSCG00000036336-9879.082Sus_scrofa
ENSCSEG00000015241-10088.088ENSTRUG00000011577-10088.088Takifugu_rubripes
ENSCSEG00000015241-10088.189ENSTRUG00000003767-10088.346Takifugu_rubripes
ENSCSEG00000015241-10088.401ENSTNIG00000009153pabpc1b10088.401Tetraodon_nigroviridis
ENSCSEG00000015241-10085.471ENSTNIG00000013307pabpc1a10085.471Tetraodon_nigroviridis
ENSCSEG00000015241-5879.082ENSTTRG00000013181-9879.082Tursiops_truncatus
ENSCSEG00000015241-5879.082ENSUAMG00000008089-9879.082Ursus_americanus
ENSCSEG00000015241-9752.529ENSUMAG00000023926-8966.575Ursus_maritimus
ENSCSEG00000015241-5879.082ENSUMAG00000003364-9879.082Ursus_maritimus
ENSCSEG00000015241-5978.000ENSVVUG00000015892-9778.000Vulpes_vulpes
ENSCSEG00000015241-9944.966ENSXETG00000015439-10044.966Xenopus_tropicalis
ENSCSEG00000015241-10085.466ENSXCOG00000017066pabpc1a10085.466Xiphophorus_couchianus
ENSCSEG00000015241-10086.593ENSXCOG00000019901pabpc1b10086.593Xiphophorus_couchianus
ENSCSEG00000015241-10090.694ENSXMAG00000003753pabpc1b10090.694Xiphophorus_maculatus
ENSCSEG00000015241-10088.871ENSXMAG00000002555pabpc1a10088.871Xiphophorus_maculatus

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