EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSEG00000015286 (Gene tree)
Gene ID
-
Gene Symbol
lsm5
Alias
zgc:171959
Full Name
LSM5 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Minus strand
Length
1060 bases
Position
chr3:9697297-9698356
Accession
103377155
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000023988LSMPF01423.223.2e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000024307-180XM_008307818ENSCSEP0000002398859 (aa)XP_008306040-
Gene Model
Click here to download ENSCSEG00000015286's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015286's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000015286lsm57693.333ENSG00000106355LSM57393.333Homo_sapiens
ENSCSEG00000015286lsm57695.556ENSAPOG00000011743LSM57395.556Acanthochromis_polyacanthus
ENSCSEG00000015286lsm510062.637ENSAPOG00000020779LSM510062.637Acanthochromis_polyacanthus
ENSCSEG00000015286lsm510059.341ENSAMEG00000006700LSM510059.341Ailuropoda_melanoleuca
ENSCSEG00000015286lsm59396.364ENSACIG00000019185lsm59896.364Amphilophus_citrinellus
ENSCSEG00000015286lsm510062.637ENSAOCG00000001636lsm510062.637Amphiprion_ocellaris
ENSCSEG00000015286lsm510062.637ENSAPEG00000008151lsm510062.637Amphiprion_percula
ENSCSEG00000015286lsm57695.556ENSAPEG00000008201lsm57395.556Amphiprion_percula
ENSCSEG00000015286lsm510094.915ENSATEG00000020470lsm510094.915Anabas_testudineus
ENSCSEG00000015286lsm57393.023ENSAPLG00000008171LSM55893.023Anas_platyrhynchos
ENSCSEG00000015286lsm510059.494ENSANAG00000037758-10059.494Aotus_nancymaae
ENSCSEG00000015286lsm510058.242ENSANAG00000034409-10058.242Aotus_nancymaae
ENSCSEG00000015286lsm59854.444ENSANAG00000024192-9454.444Aotus_nancymaae
ENSCSEG00000015286lsm59359.770ENSACLG00000012891lsm59959.770Astatotilapia_calliptera
ENSCSEG00000015286lsm510058.511ENSAMXG00000035543lsm510058.511Astyanax_mexicanus
ENSCSEG00000015286lsm510059.341ENSBTAG00000002332LSM510059.341Bos_taurus
ENSCSEG00000015286lsm510045.055WBGene00003079lsm-510045.055Caenorhabditis_elegans
ENSCSEG00000015286lsm59854.444ENSCJAG00000005678-10054.444Callithrix_jacchus
ENSCSEG00000015286lsm510059.341ENSCJAG00000047379LSM55759.341Callithrix_jacchus
ENSCSEG00000015286lsm510058.242ENSCAFG00000019261-10058.242Canis_familiaris
ENSCSEG00000015286lsm510059.341ENSCAFG00020004946LSM510059.341Canis_lupus_dingo
ENSCSEG00000015286lsm57144.595ENSCHIG00000021428-9546.591Capra_hircus
ENSCSEG00000015286lsm510059.341ENSCHIG00000024539LSM510059.341Capra_hircus
ENSCSEG00000015286lsm510057.143ENSCHIG00000004079-10057.143Capra_hircus
ENSCSEG00000015286lsm510059.341ENSTSYG00000006449-10059.341Carlito_syrichta
ENSCSEG00000015286lsm510060.000ENSTSYG00000028728-10060.000Carlito_syrichta
ENSCSEG00000015286lsm510043.243ENSTSYG00000036637-10043.243Carlito_syrichta
ENSCSEG00000015286lsm510058.333ENSTSYG00000026530-9158.333Carlito_syrichta
ENSCSEG00000015286lsm57682.222ENSCAPG00000006980LSM56082.222Cavia_aperea
ENSCSEG00000015286lsm510093.220ENSCPOG00000036386LSM510093.220Cavia_porcellus
ENSCSEG00000015286lsm510062.025ENSCCAG00000032792-10062.025Cebus_capucinus
ENSCSEG00000015286lsm510059.341ENSCCAG00000000821-10059.341Cebus_capucinus
ENSCSEG00000015286lsm510059.341ENSCCAG00000037808-10059.341Cebus_capucinus
ENSCSEG00000015286lsm510057.143ENSCCAG00000032123-10057.143Cebus_capucinus
ENSCSEG00000015286lsm510058.442ENSCCAG00000037334-10058.442Cebus_capucinus
ENSCSEG00000015286lsm57693.333ENSCATG00000040218LSM57393.333Cercocebus_atys
ENSCSEG00000015286lsm59848.889ENSCATG00000014790-10048.889Cercocebus_atys
ENSCSEG00000015286lsm510093.220ENSCLAG00000000202LSM510093.220Chinchilla_lanigera
ENSCSEG00000015286lsm510051.111ENSCLAG00000005062-9051.111Chinchilla_lanigera
ENSCSEG00000015286lsm57352.000ENSCHOG00000005335LSM59952.000Choloepus_hoffmanni
ENSCSEG00000015286lsm510059.341ENSCPBG00000013685LSM510059.341Chrysemys_picta_bellii
ENSCSEG00000015286lsm57682.222ENSCING00000020625-5182.222Ciona_intestinalis
ENSCSEG00000015286lsm57682.222ENSCSAVG00000001439-5182.222Ciona_savignyi
ENSCSEG00000015286lsm57693.333ENSCANG00000039909LSM57393.333Colobus_angolensis_palliatus
ENSCSEG00000015286lsm510093.220ENSCGRG00001015461Lsm510093.220Cricetulus_griseus_chok1gshd
ENSCSEG00000015286lsm57693.333ENSCGRG00000007677Lsm56093.333Cricetulus_griseus_crigri
ENSCSEG00000015286lsm57695.556ENSCVAG00000004262lsm510060.440Cyprinodon_variegatus
ENSCSEG00000015286lsm57695.556ENSDARG00000071573lsm57395.556Danio_rerio
ENSCSEG00000015286lsm510059.341ENSDNOG00000034958LSM510059.341Dasypus_novemcinctus
ENSCSEG00000015286lsm59352.874ENSDNOG00000049495-9652.874Dasypus_novemcinctus
ENSCSEG00000015286lsm510093.220ENSDORG00000009422Lsm510093.220Dipodomys_ordii
ENSCSEG00000015286lsm55891.176ENSETEG00000016074-5291.176Echinops_telfairi
ENSCSEG00000015286lsm510059.341ENSETEG00000018068LSM510059.341Echinops_telfairi
ENSCSEG00000015286lsm57667.347ENSETEG00000000777-9950.000Echinops_telfairi
ENSCSEG00000015286lsm59751.250ENSETEG00000010651-9951.250Echinops_telfairi
ENSCSEG00000015286lsm510057.143ENSEBUG00000008540lsm510057.143Eptatretus_burgeri
ENSCSEG00000015286lsm510059.341ENSEASG00005003500LSM510059.341Equus_asinus_asinus
ENSCSEG00000015286lsm510053.659ENSECAG00000018445LSM510053.659Equus_caballus
ENSCSEG00000015286lsm57686.667ENSEEUG00000004102LSM57586.667Erinaceus_europaeus
ENSCSEG00000015286lsm510060.440ENSELUG00000007792lsm510060.440Esox_lucius
ENSCSEG00000015286lsm510059.341ENSFCAG00000000230LSM510059.341Felis_catus
ENSCSEG00000015286lsm57693.333ENSFALG00000001892LSM55493.333Ficedula_albicollis
ENSCSEG00000015286lsm510093.220ENSFDAG00000008767LSM510093.220Fukomys_damarensis
ENSCSEG00000015286lsm58179.167ENSFHEG00000004011lsm55579.167Fundulus_heteroclitus
ENSCSEG00000015286lsm59860.000ENSGMOG00000018235lsm510060.000Gadus_morhua
ENSCSEG00000015286lsm510058.242ENSGALG00000041625LSM510058.242Gallus_gallus
ENSCSEG00000015286lsm57695.556ENSGAFG00000016824lsm57395.556Gambusia_affinis
ENSCSEG00000015286lsm510061.538ENSGACG00000005528lsm510061.538Gasterosteus_aculeatus
ENSCSEG00000015286lsm510059.341ENSGAGG00000015593LSM510059.341Gopherus_agassizii
ENSCSEG00000015286lsm510059.341ENSGGOG00000043469LSM510059.341Gorilla_gorilla
ENSCSEG00000015286lsm59359.770ENSHBUG00000013773lsm59959.770Haplochromis_burtoni
ENSCSEG00000015286lsm510093.220ENSHGLG00000011765LSM510093.220Heterocephalus_glaber_female
ENSCSEG00000015286lsm510088.136ENSHGLG00100015610LSM510088.136Heterocephalus_glaber_male
ENSCSEG00000015286lsm510093.220ENSHCOG00000008288lsm510093.220Hippocampus_comes
ENSCSEG00000015286lsm510059.341ENSIPUG00000021095LSM510059.341Ictalurus_punctatus
ENSCSEG00000015286lsm510093.220ENSSTOG00000012662LSM510093.220Ictidomys_tridecemlineatus
ENSCSEG00000015286lsm57680.000ENSSTOG00000033886-5180.000Ictidomys_tridecemlineatus
ENSCSEG00000015286lsm510056.579ENSJJAG00000016144-9256.579Jaculus_jaculus
ENSCSEG00000015286lsm58049.367ENSJJAG00000004475-10049.367Jaculus_jaculus
ENSCSEG00000015286lsm510091.525ENSJJAG00000012145-10091.525Jaculus_jaculus
ENSCSEG00000015286lsm510061.538ENSKMAG00000021861lsm510061.538Kryptolebias_marmoratus
ENSCSEG00000015286lsm58654.217ENSLBEG00000009235LSM56554.217Labrus_bergylta
ENSCSEG00000015286lsm510058.242ENSLACG00000022448LSM510058.242Latimeria_chalumnae
ENSCSEG00000015286lsm510059.341ENSLOCG00000012903lsm510059.341Lepisosteus_oculatus
ENSCSEG00000015286lsm510056.962ENSLAFG00000027938-10056.962Loxodonta_africana
ENSCSEG00000015286lsm510059.341ENSLAFG00000029579LSM510059.341Loxodonta_africana
ENSCSEG00000015286lsm510058.242ENSMFAG00000030152-10058.242Macaca_fascicularis
ENSCSEG00000015286lsm510059.341ENSMFAG00000038508LSM510059.341Macaca_fascicularis
ENSCSEG00000015286lsm510058.242ENSMMUG00000030131-10058.242Macaca_mulatta
ENSCSEG00000015286lsm59850.000ENSMMUG00000039822-10050.000Macaca_mulatta
ENSCSEG00000015286lsm57693.333ENSMNEG00000015331LSM57393.333Macaca_nemestrina
ENSCSEG00000015286lsm510058.242ENSMNEG00000037935-10058.242Macaca_nemestrina
ENSCSEG00000015286lsm59748.315ENSMLEG00000034037-10048.315Mandrillus_leucophaeus
ENSCSEG00000015286lsm510059.341ENSMLEG00000024945LSM510059.341Mandrillus_leucophaeus
ENSCSEG00000015286lsm510057.143ENSMAMG00000012869lsm510057.143Mastacembelus_armatus
ENSCSEG00000015286lsm59359.770ENSMZEG00005019554lsm59959.770Maylandia_zebra
ENSCSEG00000015286lsm510058.242ENSMGAG00000012117LSM510058.242Meleagris_gallopavo
ENSCSEG00000015286lsm510093.220ENSMAUG00000012222Lsm510093.220Mesocricetus_auratus
ENSCSEG00000015286lsm510058.242ENSMAUG00000008132-10058.242Mesocricetus_auratus
ENSCSEG00000015286lsm510059.341ENSMICG00000005353LSM510059.341Microcebus_murinus
ENSCSEG00000015286lsm59870.270ENSMICG00000033928-9670.270Microcebus_murinus
ENSCSEG00000015286lsm510093.220ENSMOCG00000012018Lsm510093.220Microtus_ochrogaster
ENSCSEG00000015286lsm57695.556ENSMMOG00000004026lsm55295.556Mola_mola
ENSCSEG00000015286lsm57693.333ENSMODG00000013274-7393.333Monodelphis_domestica
ENSCSEG00000015286lsm57688.889ENSMALG00000010343lsm57388.889Monopterus_albus
ENSCSEG00000015286lsm510093.220MGP_CAROLIEiJ_G0028421Lsm510093.220Mus_caroli
ENSCSEG00000015286lsm510093.220ENSMUSG00000091625Lsm510093.220Mus_musculus
ENSCSEG00000015286lsm510093.220MGP_PahariEiJ_G0022171Lsm510093.220Mus_pahari
ENSCSEG00000015286lsm510093.220MGP_SPRETEiJ_G0029423Lsm510093.220Mus_spretus
ENSCSEG00000015286lsm510059.341ENSMLUG00000017028LSM510059.341Myotis_lucifugus
ENSCSEG00000015286lsm510093.220ENSNGAG00000024142Lsm510093.220Nannospalax_galili
ENSCSEG00000015286lsm510059.770ENSNGAG00000017707-10059.770Nannospalax_galili
ENSCSEG00000015286lsm59861.250ENSNGAG00000022569-9661.250Nannospalax_galili
ENSCSEG00000015286lsm57695.556ENSNBRG00000011386lsm56095.556Neolamprologus_brichardi
ENSCSEG00000015286lsm510059.341ENSNLEG00000015268LSM510059.341Nomascus_leucogenys
ENSCSEG00000015286lsm57693.333ENSOPRG00000002443LSM56093.333Ochotona_princeps
ENSCSEG00000015286lsm510093.220ENSODEG00000008258-10093.220Octodon_degus
ENSCSEG00000015286lsm510059.341ENSODEG00000019072-10059.341Octodon_degus
ENSCSEG00000015286lsm56951.220ENSOANG00000014540-5551.220Ornithorhynchus_anatinus
ENSCSEG00000015286lsm510059.341ENSOCUG00000029043LSM510059.341Oryctolagus_cuniculus
ENSCSEG00000015286lsm510060.440ENSORLG00000027725lsm55860.440Oryzias_latipes
ENSCSEG00000015286lsm57693.333ENSORLG00020003019lsm58655.172Oryzias_latipes_hni
ENSCSEG00000015286lsm510060.440ENSORLG00015003338lsm510060.440Oryzias_latipes_hsok
ENSCSEG00000015286lsm57693.333ENSOMEG00000001078lsm510059.341Oryzias_melastigma
ENSCSEG00000015286lsm510059.341ENSOGAG00000013892LSM510059.341Otolemur_garnettii
ENSCSEG00000015286lsm510059.341ENSOARG00000006944LSM510059.341Ovis_aries
ENSCSEG00000015286lsm510059.341ENSPPAG00000003697-10059.341Pan_paniscus
ENSCSEG00000015286lsm510059.341ENSPPRG00000002550LSM510059.341Panthera_pardus
ENSCSEG00000015286lsm510059.341ENSPTIG00000015604LSM510059.341Panthera_tigris_altaica
ENSCSEG00000015286lsm510059.341ENSPTRG00000019057LSM510059.341Pan_troglodytes
ENSCSEG00000015286lsm510044.828ENSPTRG00000049488-10050.575Pan_troglodytes
ENSCSEG00000015286lsm59850.000ENSPANG00000032538-10050.000Papio_anubis
ENSCSEG00000015286lsm510057.143ENSPANG00000033477-10057.143Papio_anubis
ENSCSEG00000015286lsm510059.341ENSPANG00000032179-10059.341Papio_anubis
ENSCSEG00000015286lsm510061.538ENSPKIG00000011910lsm510061.538Paramormyrops_kingsleyae
ENSCSEG00000015286lsm57393.023ENSPSIG00000014796LSM55893.023Pelodiscus_sinensis
ENSCSEG00000015286lsm57695.556ENSPMGG00000011699lsm57395.556Periophthalmus_magnuspinnatus
ENSCSEG00000015286lsm510043.902ENSPEMG00000022375-10043.902Peromyscus_maniculatus_bairdii
ENSCSEG00000015286lsm510060.440ENSPFOG00000001433lsm510060.440Poecilia_formosa
ENSCSEG00000015286lsm510060.440ENSPLAG00000009665lsm510060.440Poecilia_latipinna
ENSCSEG00000015286lsm510060.440ENSPMEG00000022265lsm510060.440Poecilia_mexicana
ENSCSEG00000015286lsm57695.556ENSPREG00000022452lsm57395.556Poecilia_reticulata
ENSCSEG00000015286lsm510057.143ENSPPYG00000017661LSM510057.143Pongo_abelii
ENSCSEG00000015286lsm58355.556ENSPCAG00000013740LSM510055.556Procavia_capensis
ENSCSEG00000015286lsm510059.341ENSPVAG00000009786LSM510059.341Pteropus_vampyrus
ENSCSEG00000015286lsm59359.770ENSPNYG00000022236lsm59959.770Pundamilia_nyererei
ENSCSEG00000015286lsm510059.341ENSPNAG00000001887lsm510059.341Pygocentrus_nattereri
ENSCSEG00000015286lsm510059.341ENSRNOG00000042126Lsm510059.341Rattus_norvegicus
ENSCSEG00000015286lsm510057.609ENSRNOG00000027305AABR07065089.110057.609Rattus_norvegicus
ENSCSEG00000015286lsm510059.341ENSRBIG00000030714-10059.341Rhinopithecus_bieti
ENSCSEG00000015286lsm57693.333ENSRBIG00000027803-7393.333Rhinopithecus_bieti
ENSCSEG00000015286lsm510058.242ENSRBIG00000024431-10058.242Rhinopithecus_bieti
ENSCSEG00000015286lsm510059.341ENSRBIG00000030340-10059.341Rhinopithecus_bieti
ENSCSEG00000015286lsm510059.341ENSRROG00000004655-10059.341Rhinopithecus_roxellana
ENSCSEG00000015286lsm510059.341ENSRROG00000023884-10059.341Rhinopithecus_roxellana
ENSCSEG00000015286lsm57693.333ENSRROG00000042782-7393.333Rhinopithecus_roxellana
ENSCSEG00000015286lsm510057.143ENSSBOG00000019124-10057.143Saimiri_boliviensis_boliviensis
ENSCSEG00000015286lsm510059.494ENSSBOG00000034794-10059.494Saimiri_boliviensis_boliviensis
ENSCSEG00000015286lsm510059.341ENSSBOG00000012312LSM510059.341Saimiri_boliviensis_boliviensis
ENSCSEG00000015286lsm510061.538ENSSFOG00015010099lsm510061.538Scleropages_formosus
ENSCSEG00000015286lsm510096.610ENSSMAG00000007895lsm510096.610Scophthalmus_maximus
ENSCSEG00000015286lsm57695.556ENSSDUG00000010762lsm57395.556Seriola_dumerili
ENSCSEG00000015286lsm510096.610ENSSLDG00000025242lsm510096.610Seriola_lalandi_dorsalis
ENSCSEG00000015286lsm57693.333ENSSPUG00000002690LSM57393.333Sphenodon_punctatus
ENSCSEG00000015286lsm510098.305ENSSPAG00000005435lsm510098.305Stegastes_partitus
ENSCSEG00000015286lsm57693.333ENSSSCG00000026064-10059.341Sus_scrofa
ENSCSEG00000015286lsm510057.143ENSTGUG00000017539LSM510057.143Taeniopygia_guttata
ENSCSEG00000015286lsm59259.302ENSTNIG00000008695lsm59859.302Tetraodon_nigroviridis
ENSCSEG00000015286lsm510059.341ENSTBEG00000004876LSM510059.341Tupaia_belangeri
ENSCSEG00000015286lsm510059.341ENSTTRG00000004237LSM510059.341Tursiops_truncatus
ENSCSEG00000015286lsm59858.889ENSUMAG00000002625LSM56558.889Ursus_maritimus
ENSCSEG00000015286lsm510059.341ENSVPAG00000009985LSM510059.341Vicugna_pacos
ENSCSEG00000015286lsm510059.341ENSVVUG00000021311LSM510059.341Vulpes_vulpes
ENSCSEG00000015286lsm58554.878ENSXETG00000026465lsm510054.878Xenopus_tropicalis
ENSCSEG00000015286lsm57695.556ENSXCOG00000015348lsm57395.556Xiphophorus_couchianus
ENSCSEG00000015286lsm510060.440ENSXMAG00000029988lsm510060.440Xiphophorus_maculatus

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