EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000015432 (Gene tree)
Gene ID: 103394329
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valine--tRNA ligase%2C mitochondrial-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 14719 bases
Position: chr18:9478296-9493014
Accession: 103394329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000024321	tRNA-synt_1g	PF09334.11	3e-09	1	1
ENSCSEP00000024302	tRNA-synt_1g	PF09334.11	3e-09	1	1
ENSCSEP00000024302	Anticodon_1	PF08264.13	5.5e-16	1	1
ENSCSEP00000024321	Anticodon_1	PF08264.13	7.8e-16	1	1
ENSCSEP00000024321	tRNA-synt_1	PF00133.22	2.6e-154	1	2
ENSCSEP00000024321	tRNA-synt_1	PF00133.22	2.6e-154	2	2
ENSCSEP00000024302	tRNA-synt_1	PF00133.22	2.8e-154	1	2
ENSCSEP00000024302	tRNA-synt_1	PF00133.22	2.8e-154	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000024630	-	2712	-	ENSCSEP00000024302	903 (aa)	-	-
ENSCSET00000024649	-	2697	XM_008331578	ENSCSEP00000024321	898 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000015432's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015432's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000015432	vars2	90	58.270	ENSCSEG00000019652	vars	74	55.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000015432	vars2	99	75.165	ENSAPOG00000007396	vars2	90	75.824	Acanthochromis_polyacanthus
ENSCSEG00000015432	vars2	90	57.275	ENSAMEG00000012997	VARS2	79	57.275	Ailuropoda_melanoleuca
ENSCSEG00000015432	vars2	98	78.747	ENSACIG00000004344	vars2	99	67.842	Amphilophus_citrinellus
ENSCSEG00000015432	vars2	98	75.604	ENSAOCG00000000476	vars2	99	66.156	Amphiprion_ocellaris
ENSCSEG00000015432	vars2	98	75.604	ENSAPEG00000008646	vars2	97	66.017	Amphiprion_percula
ENSCSEG00000015432	vars2	97	78.146	ENSATEG00000012291	vars2	88	78.366	Anabas_testudineus
ENSCSEG00000015432	vars2	95	59.453	ENSACAG00000022093	VARS2	85	59.453	Anolis_carolinensis
ENSCSEG00000015432	vars2	94	56.501	ENSANAG00000038018	VARS2	84	56.501	Aotus_nancymaae
ENSCSEG00000015432	vars2	98	77.605	ENSACLG00000018673	vars2	88	77.605	Astatotilapia_calliptera
ENSCSEG00000015432	vars2	91	85.235	ENSAMXG00000017773	vars2	99	62.810	Astyanax_mexicanus
ENSCSEG00000015432	vars2	84	66.667	ENSBTAG00000010698	VARS2	82	57.437	Bos_taurus
ENSCSEG00000015432	vars2	95	56.177	ENSCJAG00000019826	VARS2	80	69.799	Callithrix_jacchus
ENSCSEG00000015432	vars2	93	55.580	ENSCAFG00000000454	VARS2	84	55.580	Canis_familiaris
ENSCSEG00000015432	vars2	79	61.069	ENSCAFG00020019387	VARS2	84	61.069	Canis_lupus_dingo
ENSCSEG00000015432	vars2	84	68.000	ENSCHIG00000007847	VARS2	82	56.659	Capra_hircus
ENSCSEG00000015432	vars2	95	54.545	ENSTSYG00000009904	VARS2	87	54.545	Carlito_syrichta
ENSCSEG00000015432	vars2	81	61.383	ENSCAPG00000017770	VARS2	84	61.383	Cavia_aperea
ENSCSEG00000015432	vars2	88	67.333	ENSCPOG00000021834	VARS2	82	56.818	Cavia_porcellus
ENSCSEG00000015432	vars2	88	67.333	ENSCCAG00000037907	VARS2	79	69.128	Cebus_capucinus
ENSCSEG00000015432	vars2	93	56.974	ENSCATG00000032554	VARS2	85	56.974	Cercocebus_atys
ENSCSEG00000015432	vars2	84	67.333	ENSCLAG00000002889	VARS2	83	57.111	Chinchilla_lanigera
ENSCSEG00000015432	vars2	95	57.210	ENSCSAG00000008327	VARS2	85	57.210	Chlorocebus_sabaeus
ENSCSEG00000015432	vars2	83	70.139	ENSCPBG00000021502	VARS2	74	70.139	Chrysemys_picta_bellii
ENSCSEG00000015432	vars2	86	65.333	ENSCANG00000014991	VARS2	85	56.738	Colobus_angolensis_palliatus
ENSCSEG00000015432	vars2	96	57.466	ENSCGRG00001021535	Vars2	86	57.798	Cricetulus_griseus_chok1gshd
ENSCSEG00000015432	vars2	96	57.466	ENSCGRG00000014112	Vars2	86	57.798	Cricetulus_griseus_crigri
ENSCSEG00000015432	vars2	51	85.235	ENSCVAG00000017765	vars2	99	59.524	Cyprinodon_variegatus
ENSCSEG00000015432	vars2	95	72.664	ENSDARG00000056717	vars2	87	72.664	Danio_rerio
ENSCSEG00000015432	vars2	76	54.902	ENSDORG00000008516	Vars2	81	61.272	Dipodomys_ordii
ENSCSEG00000015432	vars2	89	55.438	ENSETEG00000014844	VARS2	82	55.438	Echinops_telfairi
ENSCSEG00000015432	vars2	91	58.865	ENSEASG00005019997	VARS2	83	63.315	Equus_asinus_asinus
ENSCSEG00000015432	vars2	91	59.102	ENSECAG00000018202	VARS2	84	59.102	Equus_caballus
ENSCSEG00000015432	vars2	97	70.678	ENSELUG00000017824	vars2	99	62.517	Esox_lucius
ENSCSEG00000015432	vars2	94	58.354	ENSFCAG00000010531	VARS2	83	58.354	Felis_catus
ENSCSEG00000015432	vars2	85	68.750	ENSFDAG00000017216	VARS2	81	57.110	Fukomys_damarensis
ENSCSEG00000015432	vars2	90	71.523	ENSFHEG00000013932	vars2	86	71.523	Fundulus_heteroclitus
ENSCSEG00000015432	vars2	88	74.419	ENSGMOG00000018960	vars2	87	74.419	Gadus_morhua
ENSCSEG00000015432	vars2	89	83.544	ENSGAFG00000004737	vars2	86	83.544	Gambusia_affinis
ENSCSEG00000015432	vars2	90	80.940	ENSGACG00000001464	vars2	87	80.940	Gasterosteus_aculeatus
ENSCSEG00000015432	vars2	83	70.946	ENSGAGG00000011652	VARS2	74	70.946	Gopherus_agassizii
ENSCSEG00000015432	vars2	93	56.501	ENSGGOG00000014587	VARS2	85	56.501	Gorilla_gorilla
ENSCSEG00000015432	vars2	98	74.497	ENSHBUG00000002448	vars2	88	74.497	Haplochromis_burtoni
ENSCSEG00000015432	vars2	90	66.667	ENSHGLG00000012886	VARS2	84	56.125	Heterocephalus_glaber_female
ENSCSEG00000015432	vars2	90	66.667	ENSHGLG00100016535	VARS2	87	55.902	Heterocephalus_glaber_male
ENSCSEG00000015432	vars2	60	85.915	ENSHCOG00000017907	vars2	80	85.915	Hippocampus_comes
ENSCSEG00000015432	vars2	92	75.758	ENSIPUG00000015573	Vars2	99	63.282	Ictalurus_punctatus
ENSCSEG00000015432	vars2	82	68.000	ENSSTOG00000009924	VARS2	80	56.398	Ictidomys_tridecemlineatus
ENSCSEG00000015432	vars2	85	69.444	ENSJJAG00000011144	Vars2	83	56.322	Jaculus_jaculus
ENSCSEG00000015432	vars2	97	72.026	ENSKMAG00000001393	vars2	99	64.067	Kryptolebias_marmoratus
ENSCSEG00000015432	vars2	99	70.833	ENSLBEG00000011949	vars2	93	70.833	Labrus_bergylta
ENSCSEG00000015432	vars2	54	69.565	ENSLBEG00000005480	-	63	89.000	Labrus_bergylta
ENSCSEG00000015432	vars2	90	72.727	ENSLACG00000001576	-	82	72.727	Latimeria_chalumnae
ENSCSEG00000015432	vars2	92	66.887	ENSLAFG00000015183	VARS2	97	51.576	Loxodonta_africana
ENSCSEG00000015432	vars2	93	56.738	ENSMFAG00000042367	VARS2	85	56.738	Macaca_fascicularis
ENSCSEG00000015432	vars2	93	56.738	ENSMMUG00000018609	VARS2	85	56.738	Macaca_mulatta
ENSCSEG00000015432	vars2	93	56.738	ENSMNEG00000043163	VARS2	85	56.738	Macaca_nemestrina
ENSCSEG00000015432	vars2	93	56.974	ENSMLEG00000041728	VARS2	83	56.974	Mandrillus_leucophaeus
ENSCSEG00000015432	vars2	87	84.564	ENSMAMG00000020339	vars2	99	65.411	Mastacembelus_armatus
ENSCSEG00000015432	vars2	98	77.605	ENSMZEG00005017669	vars2	88	77.605	Maylandia_zebra
ENSCSEG00000015432	vars2	96	58.257	ENSMAUG00000018946	Vars2	86	58.257	Mesocricetus_auratus
ENSCSEG00000015432	vars2	62	68.750	ENSMICG00000005365	VARS2	65	67.532	Microcebus_murinus
ENSCSEG00000015432	vars2	96	57.014	ENSMOCG00000014607	Vars2	85	57.014	Microtus_ochrogaster
ENSCSEG00000015432	vars2	92	78.535	ENSMMOG00000012122	vars2	99	64.888	Mola_mola
ENSCSEG00000015432	vars2	92	56.193	ENSMODG00000015848	VARS2	88	56.512	Monodelphis_domestica
ENSCSEG00000015432	vars2	91	81.606	ENSMALG00000009217	vars2	88	81.606	Monopterus_albus
ENSCSEG00000015432	vars2	89	57.447	MGP_CAROLIEiJ_G0021529	Vars2	99	45.576	Mus_caroli
ENSCSEG00000015432	vars2	90	57.210	ENSMUSG00000038838	Vars2	81	57.210	Mus_musculus
ENSCSEG00000015432	vars2	90	57.044	MGP_PahariEiJ_G0020523	Vars2	82	57.044	Mus_pahari
ENSCSEG00000015432	vars2	89	57.447	MGP_SPRETEiJ_G0022436	Vars2	81	57.447	Mus_spretus
ENSCSEG00000015432	vars2	92	57.207	ENSMPUG00000011643	VARS2	83	57.207	Mustela_putorius_furo
ENSCSEG00000015432	vars2	83	68.000	ENSMLUG00000002356	VARS2	79	56.582	Myotis_lucifugus
ENSCSEG00000015432	vars2	91	69.333	ENSNGAG00000020607	Vars2	95	46.491	Nannospalax_galili
ENSCSEG00000015432	vars2	64	66.087	ENSNBRG00000001624	vars2	52	62.323	Neolamprologus_brichardi
ENSCSEG00000015432	vars2	93	53.571	ENSNLEG00000005625	VARS2	83	53.571	Nomascus_leucogenys
ENSCSEG00000015432	vars2	78	73.288	ENSMEUG00000014475	VARS2	75	73.288	Notamacropus_eugenii
ENSCSEG00000015432	vars2	73	66.667	ENSOPRG00000000682	VARS2	73	57.664	Ochotona_princeps
ENSCSEG00000015432	vars2	88	67.333	ENSODEG00000017965	VARS2	85	57.044	Octodon_degus
ENSCSEG00000015432	vars2	72	82.597	ENSONIG00000004734	vars2	66	82.597	Oreochromis_niloticus
ENSCSEG00000015432	vars2	55	58.511	ENSOANG00000000398	-	69	58.511	Ornithorhynchus_anatinus
ENSCSEG00000015432	vars2	83	57.737	ENSOCUG00000021496	VARS2	52	57.737	Oryctolagus_cuniculus
ENSCSEG00000015432	vars2	86	81.290	ENSORLG00000010632	vars2	99	61.602	Oryzias_latipes
ENSCSEG00000015432	vars2	86	81.290	ENSORLG00020018584	vars2	96	63.755	Oryzias_latipes_hni
ENSCSEG00000015432	vars2	86	81.935	ENSORLG00015010408	vars2	99	61.464	Oryzias_latipes_hsok
ENSCSEG00000015432	vars2	87	80.645	ENSOMEG00000008360	vars2	96	64.723	Oryzias_melastigma
ENSCSEG00000015432	vars2	93	56.471	ENSOGAG00000006087	VARS2	94	51.458	Otolemur_garnettii
ENSCSEG00000015432	vars2	90	56.393	ENSOARG00000010844	VARS2	81	56.393	Ovis_aries
ENSCSEG00000015432	vars2	93	56.738	ENSPPAG00000041141	VARS2	85	56.738	Pan_paniscus
ENSCSEG00000015432	vars2	96	56.522	ENSPPRG00000006751	VARS2	83	56.522	Panthera_pardus
ENSCSEG00000015432	vars2	96	56.522	ENSPTIG00000017799	VARS2	84	60.051	Panthera_tigris_altaica
ENSCSEG00000015432	vars2	93	56.738	ENSPTRG00000034497	VARS2	85	56.738	Pan_troglodytes
ENSCSEG00000015432	vars2	93	56.974	ENSPANG00000018481	VARS2	85	56.974	Papio_anubis
ENSCSEG00000015432	vars2	93	75.121	ENSPKIG00000011372	vars2	86	73.721	Paramormyrops_kingsleyae
ENSCSEG00000015432	vars2	54	65.292	ENSPSIG00000006206	VARS2	71	65.292	Pelodiscus_sinensis
ENSCSEG00000015432	vars2	97	73.378	ENSPMGG00000000465	vars2	87	73.378	Periophthalmus_magnuspinnatus
ENSCSEG00000015432	vars2	96	58.486	ENSPEMG00000014691	Vars2	86	58.145	Peromyscus_maniculatus_bairdii
ENSCSEG00000015432	vars2	93	56.808	ENSPCIG00000015040	VARS2	84	56.808	Phascolarctos_cinereus
ENSCSEG00000015432	vars2	93	75.978	ENSPFOG00000017616	vars2	97	63.218	Poecilia_formosa
ENSCSEG00000015432	vars2	90	75.980	ENSPLAG00000019778	vars2	97	63.439	Poecilia_latipinna
ENSCSEG00000015432	vars2	90	75.980	ENSPMEG00000011123	vars2	99	62.011	Poecilia_mexicana
ENSCSEG00000015432	vars2	89	75.882	ENSPREG00000014998	vars2	85	75.882	Poecilia_reticulata
ENSCSEG00000015432	vars2	93	56.738	ENSPPYG00000016424	VARS2	85	56.738	Pongo_abelii
ENSCSEG00000015432	vars2	96	56.876	ENSPCOG00000014839	VARS2	83	56.876	Propithecus_coquereli
ENSCSEG00000015432	vars2	89	67.333	ENSPVAG00000004197	VARS2	85	57.647	Pteropus_vampyrus
ENSCSEG00000015432	vars2	91	75.965	ENSPNYG00000010314	vars2	92	75.965	Pundamilia_nyererei
ENSCSEG00000015432	vars2	90	82.667	ENSPNAG00000026793	vars2	97	63.390	Pygocentrus_nattereri
ENSCSEG00000015432	vars2	97	56.027	ENSRNOG00000000833	Vars2	87	55.727	Rattus_norvegicus
ENSCSEG00000015432	vars2	86	66.000	ENSRBIG00000032725	VARS2	85	56.738	Rhinopithecus_bieti
ENSCSEG00000015432	vars2	86	66.000	ENSRROG00000043847	VARS2	86	56.738	Rhinopithecus_roxellana
ENSCSEG00000015432	vars2	92	60.819	ENSSBOG00000033240	VARS2	78	60.819	Saimiri_boliviensis_boliviensis
ENSCSEG00000015432	vars2	94	57.210	ENSSHAG00000009307	VARS2	85	57.210	Sarcophilus_harrisii
ENSCSEG00000015432	vars2	91	80.000	ENSSFOG00015016187	vars2	90	71.264	Scleropages_formosus
ENSCSEG00000015432	vars2	99	78.022	ENSSMAG00000020842	vars2	89	78.414	Scophthalmus_maximus
ENSCSEG00000015432	vars2	94	82.635	ENSSDUG00000011598	vars2	99	70.334	Seriola_dumerili
ENSCSEG00000015432	vars2	99	77.483	ENSSLDG00000015492	vars2	99	69.188	Seriola_lalandi_dorsalis
ENSCSEG00000015432	vars2	76	66.667	ENSSPUG00000014700	VARS2	82	66.667	Sphenodon_punctatus
ENSCSEG00000015432	vars2	99	71.681	ENSSPAG00000004654	vars2	96	73.451	Stegastes_partitus
ENSCSEG00000015432	vars2	90	58.741	ENSSSCG00000001384	VARS2	82	58.741	Sus_scrofa
ENSCSEG00000015432	vars2	93	78.093	ENSTRUG00000005264	vars2	93	72.624	Takifugu_rubripes
ENSCSEG00000015432	vars2	91	78.231	ENSTNIG00000005916	vars2	86	71.111	Tetraodon_nigroviridis
ENSCSEG00000015432	vars2	78	68.000	ENSTTRG00000012243	VARS2	69	63.030	Tursiops_truncatus
ENSCSEG00000015432	vars2	96	58.124	ENSUAMG00000026124	VARS2	87	62.805	Ursus_americanus
ENSCSEG00000015432	vars2	96	57.666	ENSUMAG00000019894	VARS2	86	57.666	Ursus_maritimus
ENSCSEG00000015432	vars2	98	55.748	ENSVVUG00000010754	VARS2	83	55.748	Vulpes_vulpes
ENSCSEG00000015432	vars2	86	55.584	ENSXETG00000003036	vars2	98	50.530	Xenopus_tropicalis
ENSCSEG00000015432	vars2	93	74.232	ENSXCOG00000003455	vars2	86	83.544	Xiphophorus_couchianus
ENSCSEG00000015432	vars2	96	83.544	ENSXMAG00000013523	vars2	87	83.544	Xiphophorus_maculatus