EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000015567 (Gene tree)
Gene ID
103381838
Gene Symbol
RBFOX3 (1 of many)
Alias
rbfox3
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Plus strand
Length
131206 bases
Position
chr8:8296711-8427916
Accession
103381838
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000024580Fox-1_CPF12414.85.7e-2911
ENSCSEP00000024568Fox-1_CPF12414.86.2e-2911
ENSCSEP00000024527Fox-1_CPF12414.87.5e-2911
ENSCSEP00000024536Fox-1_CPF12414.87.5e-2911
ENSCSEP00000024527RRM_1PF00076.228.8e-1911
ENSCSEP00000024536RRM_1PF00076.229.4e-1911
ENSCSEP00000024568RRM_1PF00076.221e-1811
ENSCSEP00000024580RRM_1PF00076.221.1e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000024858RBFOX3 (1 of many)-2011092XM_017034186ENSCSEP00000024527363 (aa)XP_016889675-
ENSCSET00000024911RBFOX3 (1 of many)-2041032-ENSCSEP00000024580343 (aa)--
ENSCSET00000024867RBFOX3 (1 of many)-2021092XM_017034192ENSCSEP00000024536363 (aa)XP_016889681-
ENSCSET00000024899RBFOX3 (1 of many)-2031059-ENSCSEP00000024568352 (aa)--
Gene Model
Click here to download ENSCSEG00000015567's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015567's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000015567RBFOX39865.684ENSCSEG00000020606RBFOX310063.612
ENSCSEG00000015567RBFOX39952.356ENSCSEG00000018898rbfox1l8853.803
ENSCSEG00000015567RBFOX39460.317ENSCSEG00000008840rbfox110060.582
ENSCSEG00000015567RBFOX36959.107ENSCSEG00000007360-6855.758
ENSCSEG00000015567RBFOX36955.814ENSCSEG00000007748rbfox27249.728
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000015567RBFOX37293.103ENSG00000167281RBFOX310077.848Homo_sapiens
ENSCSEG00000015567RBFOX39881.132ENSAPOG00000021630rbfox3b10080.926Acanthochromis_polyacanthus
ENSCSEG00000015567RBFOX39879.775ENSAPOG00000015658-9377.686Acanthochromis_polyacanthus
ENSCSEG00000015567RBFOX39869.666ENSAMEG00000014170RBFOX39970.513Ailuropoda_melanoleuca
ENSCSEG00000015567RBFOX39374.366ENSACIG00000003768-9179.077Amphilophus_citrinellus
ENSCSEG00000015567RBFOX38585.762ENSACIG00000010817rbfox3b9984.768Amphilophus_citrinellus
ENSCSEG00000015567RBFOX39781.744ENSAOCG00000012358rbfox3b10080.926Amphiprion_ocellaris
ENSCSEG00000015567RBFOX39992.758ENSAOCG00000010786-9992.758Amphiprion_ocellaris
ENSCSEG00000015567RBFOX39880.000ENSAPEG00000019081rbfox3b9979.437Amphiprion_percula
ENSCSEG00000015567RBFOX39482.535ENSAPEG00000015891-8984.971Amphiprion_percula
ENSCSEG00000015567RBFOX38281.046ENSATEG00000023101-9481.759Anabas_testudineus
ENSCSEG00000015567RBFOX38573.699ENSATEG00000019945rbfox3b9973.988Anabas_testudineus
ENSCSEG00000015567RBFOX39578.947ENSACAG00000016093RBFOX310077.839Anolis_carolinensis
ENSCSEG00000015567RBFOX37293.333ENSANAG00000023457RBFOX310076.582Aotus_nancymaae
ENSCSEG00000015567RBFOX39787.193ENSACLG00000025552-10087.193Astatotilapia_calliptera
ENSCSEG00000015567RBFOX39880.054ENSACLG00000020011rbfox3b10080.707Astatotilapia_calliptera
ENSCSEG00000015567RBFOX39883.871ENSAMXG00000037246rbfox3a10082.796Astyanax_mexicanus
ENSCSEG00000015567RBFOX39475.281ENSAMXG00000042841rbfox3b10073.315Astyanax_mexicanus
ENSCSEG00000015567RBFOX37193.103ENSBTAG00000006280RBFOX38289.583Bos_taurus
ENSCSEG00000015567RBFOX37293.333ENSCJAG00000009563RBFOX38489.583Callithrix_jacchus
ENSCSEG00000015567RBFOX37675.704ENSCAFG00000005547RBFOX39978.648Canis_familiaris
ENSCSEG00000015567RBFOX37293.333ENSCAFG00020008126RBFOX38188.000Canis_lupus_dingo
ENSCSEG00000015567RBFOX37387.500ENSCHIG00000009124RBFOX38188.000Capra_hircus
ENSCSEG00000015567RBFOX37293.103ENSTSYG00000029617RBFOX38491.667Carlito_syrichta
ENSCSEG00000015567RBFOX38963.613ENSCPOG00000021703RBFOX38482.000Cavia_porcellus
ENSCSEG00000015567RBFOX37293.333ENSCCAG00000028450RBFOX310076.582Cebus_capucinus
ENSCSEG00000015567RBFOX38081.250ENSCATG00000018349RBFOX310077.848Cercocebus_atys
ENSCSEG00000015567RBFOX38963.852ENSCLAG00000006449RBFOX38489.583Chinchilla_lanigera
ENSCSEG00000015567RBFOX38075.667ENSCSAG00000002355RBFOX310077.848Chlorocebus_sabaeus
ENSCSEG00000015567RBFOX39773.864ENSCPBG00000010904RBFOX39878.834Chrysemys_picta_bellii
ENSCSEG00000015567RBFOX37293.333ENSCANG00000043120RBFOX310077.848Colobus_angolensis_palliatus
ENSCSEG00000015567RBFOX37286.207ENSCGRG00001019476Rbfox38483.673Cricetulus_griseus_chok1gshd
ENSCSEG00000015567RBFOX37286.207ENSCGRG00000003268Rbfox38483.673Cricetulus_griseus_crigri
ENSCSEG00000015567RBFOX39780.978ENSCVAG00000006882rbfox3b9980.163Cyprinodon_variegatus
ENSCSEG00000015567RBFOX38973.786ENSDARG00000074310rbfox3b9574.150Danio_rerio
ENSCSEG00000015567RBFOX39784.595ENSDARG00000010083rbfox3a10083.558Danio_rerio
ENSCSEG00000015567RBFOX37161.056ENSDNOG00000039391RBFOX35888.095Dasypus_novemcinctus
ENSCSEG00000015567RBFOX38959.079ENSDORG00000005352Rbfox38183.333Dipodomys_ordii
ENSCSEG00000015567RBFOX39663.784ENSEBUG00000002129RBFOX39964.865Eptatretus_burgeri
ENSCSEG00000015567RBFOX37458.273ENSEBUG00000013559RBFOX36359.740Eptatretus_burgeri
ENSCSEG00000015567RBFOX37977.152ENSEASG00005005059RBFOX310079.180Equus_asinus_asinus
ENSCSEG00000015567RBFOX38870.517ENSECAG00000023811RBFOX310078.864Equus_caballus
ENSCSEG00000015567RBFOX36786.000ENSEEUG00000013974RBFOX36986.000Erinaceus_europaeus
ENSCSEG00000015567RBFOX39880.376ENSELUG00000017963rbfox3b9980.163Esox_lucius
ENSCSEG00000015567RBFOX39576.731ENSFCAG00000002555RBFOX310077.624Felis_catus
ENSCSEG00000015567RBFOX39857.855ENSFALG00000012288RBFOX39958.495Ficedula_albicollis
ENSCSEG00000015567RBFOX38958.530ENSFDAG00000007489RBFOX38382.000Fukomys_damarensis
ENSCSEG00000015567RBFOX38472.293ENSFHEG00000008550rbfox3b10071.338Fundulus_heteroclitus
ENSCSEG00000015567RBFOX38486.538ENSGMOG00000019304-6888.623Gadus_morhua
ENSCSEG00000015567RBFOX39877.507ENSGALG00000032889RBFOX310079.444Gallus_gallus
ENSCSEG00000015567RBFOX39881.408ENSGAFG00000005025rbfox3b9980.563Gambusia_affinis
ENSCSEG00000015567RBFOX38987.448ENSGACG00000002138-8087.603Gasterosteus_aculeatus
ENSCSEG00000015567RBFOX39678.453ENSGAGG00000020025RBFOX39778.571Gopherus_agassizii
ENSCSEG00000015567RBFOX37293.333ENSGGOG00000012546RBFOX310077.848Gorilla_gorilla
ENSCSEG00000015567RBFOX39880.054ENSHBUG00000018099rbfox3b9979.076Haplochromis_burtoni
ENSCSEG00000015567RBFOX39682.303ENSHBUG00000023098-9784.866Haplochromis_burtoni
ENSCSEG00000015567RBFOX38963.185ENSHGLG00000008679RBFOX38480.769Heterocephalus_glaber_female
ENSCSEG00000015567RBFOX38959.635ENSHGLG00100014739RBFOX38775.379Heterocephalus_glaber_male
ENSCSEG00000015567RBFOX39671.547ENSHCOG00000007444RBFOX39370.330Hippocampus_comes
ENSCSEG00000015567RBFOX39080.564ENSHCOG00000001863RBFOX39380.263Hippocampus_comes
ENSCSEG00000015567RBFOX37477.692ENSIPUG00000021966rbfox3b9377.016Ictalurus_punctatus
ENSCSEG00000015567RBFOX39881.551ENSIPUG00000012010rbfox3a10080.593Ictalurus_punctatus
ENSCSEG00000015567RBFOX38962.848ENSSTOG00000026817RBFOX310066.452Ictidomys_tridecemlineatus
ENSCSEG00000015567RBFOX37293.103ENSJJAG00000014167Rbfox38489.583Jaculus_jaculus
ENSCSEG00000015567RBFOX39781.471ENSKMAG00000006726rbfox3b10080.654Kryptolebias_marmoratus
ENSCSEG00000015567RBFOX39791.826ENSLBEG00000022508-10091.826Labrus_bergylta
ENSCSEG00000015567RBFOX39880.863ENSLBEG00000004030rbfox3b9984.768Labrus_bergylta
ENSCSEG00000015567RBFOX39670.380ENSLACG00000018409-10070.380Latimeria_chalumnae
ENSCSEG00000015567RBFOX35157.754ENSLACG00000000021-9558.378Latimeria_chalumnae
ENSCSEG00000015567RBFOX38886.196ENSLOCG00000012267rbfox3a9886.810Lepisosteus_oculatus
ENSCSEG00000015567RBFOX39770.769ENSLAFG00000016623RBFOX38188.000Loxodonta_africana
ENSCSEG00000015567RBFOX38963.260ENSMFAG00000002247RBFOX38489.583Macaca_fascicularis
ENSCSEG00000015567RBFOX37293.103ENSMMUG00000023028RBFOX310077.848Macaca_mulatta
ENSCSEG00000015567RBFOX38075.333ENSMNEG00000041147RBFOX310077.532Macaca_nemestrina
ENSCSEG00000015567RBFOX38075.667ENSMLEG00000025686RBFOX310077.848Mandrillus_leucophaeus
ENSCSEG00000015567RBFOX38583.904ENSMAMG00000019810rbfox3b9982.877Mastacembelus_armatus
ENSCSEG00000015567RBFOX39689.143ENSMAMG00000020600-9989.143Mastacembelus_armatus
ENSCSEG00000015567RBFOX39880.054ENSMZEG00005000781rbfox3b10079.837Maylandia_zebra
ENSCSEG00000015567RBFOX38173.065ENSMZEG00005003055-8172.755Maylandia_zebra
ENSCSEG00000015567RBFOX36180.090ENSMGAG00000005600RBFOX38677.391Meleagris_gallopavo
ENSCSEG00000015567RBFOX38962.895ENSMAUG00000013543Rbfox38483.333Mesocricetus_auratus
ENSCSEG00000015567RBFOX37693.333ENSMICG00000014898RBFOX39677.741Microcebus_murinus
ENSCSEG00000015567RBFOX38962.963ENSMOCG00000015373Rbfox38487.500Microtus_ochrogaster
ENSCSEG00000015567RBFOX39880.055ENSMMOG00000020193rbfox3b9978.533Mola_mola
ENSCSEG00000015567RBFOX39577.500ENSMODG00000002089RBFOX310077.839Monodelphis_domestica
ENSCSEG00000015567RBFOX39890.296ENSMALG00000018270-10091.008Monopterus_albus
ENSCSEG00000015567RBFOX39780.381ENSMALG00000020407rbfox3b10079.564Monopterus_albus
ENSCSEG00000015567RBFOX38973.795MGP_CAROLIEiJ_G0017487Rbfox310078.481Mus_caroli
ENSCSEG00000015567RBFOX38973.494ENSMUSG00000025576Rbfox310078.165Mus_musculus
ENSCSEG00000015567RBFOX37289.655MGP_PahariEiJ_G0018614Rbfox310078.549Mus_pahari
ENSCSEG00000015567RBFOX38974.096MGP_SPRETEiJ_G0018331Rbfox310078.797Mus_spretus
ENSCSEG00000015567RBFOX39865.995ENSMPUG00000012319RBFOX39670.541Mustela_putorius_furo
ENSCSEG00000015567RBFOX38964.644ENSNGAG00000018006Rbfox38489.583Nannospalax_galili
ENSCSEG00000015567RBFOX39779.292ENSNBRG00000010102rbfox3b9978.474Neolamprologus_brichardi
ENSCSEG00000015567RBFOX39483.082ENSNBRG00000022885-9683.082Neolamprologus_brichardi
ENSCSEG00000015567RBFOX38556.536ENSNLEG00000000153-9461.111Nomascus_leucogenys
ENSCSEG00000015567RBFOX37783.333ENSMEUG00000004218-8389.583Notamacropus_eugenii
ENSCSEG00000015567RBFOX37075.521ENSOPRG00000016279-7575.521Ochotona_princeps
ENSCSEG00000015567RBFOX38077.741ENSODEG00000009433RBFOX310078.797Octodon_degus
ENSCSEG00000015567RBFOX38885.846ENSONIG00000007282-9884.478Oreochromis_niloticus
ENSCSEG00000015567RBFOX39780.707ENSONIG00000009549rbfox3b9979.891Oreochromis_niloticus
ENSCSEG00000015567RBFOX36958.621ENSOCUG00000014217RBFOX35483.333Oryctolagus_cuniculus
ENSCSEG00000015567RBFOX39880.707ENSORLG00000000905rbfox3b7979.348Oryzias_latipes
ENSCSEG00000015567RBFOX39880.707ENSORLG00020018030rbfox3b9979.348Oryzias_latipes_hni
ENSCSEG00000015567RBFOX39880.435ENSORLG00015009200rbfox3b9979.620Oryzias_latipes_hsok
ENSCSEG00000015567RBFOX38178.387ENSOMEG00000014677rbfox3b8578.395Oryzias_melastigma
ENSCSEG00000015567RBFOX39771.467ENSOGAG00000029595RBFOX39872.358Otolemur_garnettii
ENSCSEG00000015567RBFOX36364.069ENSOARG00000002908RBFOX310051.951Ovis_aries
ENSCSEG00000015567RBFOX36580.753ENSPPAG00000025383RBFOX39577.536Pan_paniscus
ENSCSEG00000015567RBFOX38064.118ENSPPRG00000007819RBFOX38585.417Panthera_pardus
ENSCSEG00000015567RBFOX37293.333ENSPTRG00000009727RBFOX310077.848Pan_troglodytes
ENSCSEG00000015567RBFOX38075.667ENSPANG00000019837RBFOX310077.848Papio_anubis
ENSCSEG00000015567RBFOX39884.097ENSPKIG00000010299rbfox3a9883.186Paramormyrops_kingsleyae
ENSCSEG00000015567RBFOX39763.897ENSPKIG00000022633-9762.670Paramormyrops_kingsleyae
ENSCSEG00000015567RBFOX38579.808ENSPMGG00000008000rbfox3b9780.449Periophthalmus_magnuspinnatus
ENSCSEG00000015567RBFOX38962.005ENSPEMG00000010500Rbfox38487.500Peromyscus_maniculatus_bairdii
ENSCSEG00000015567RBFOX35665.158ENSPMAG00000008689rbfox3b9966.968Petromyzon_marinus
ENSCSEG00000015567RBFOX39568.949ENSPCIG00000005766RBFOX38589.583Phascolarctos_cinereus
ENSCSEG00000015567RBFOX39880.376ENSPFOG00000018294rbfox3b9779.570Poecilia_formosa
ENSCSEG00000015567RBFOX37385.603ENSPLAG00000000481rbfox3b7588.793Poecilia_latipinna
ENSCSEG00000015567RBFOX38472.611ENSPMEG00000022997rbfox3b10071.656Poecilia_mexicana
ENSCSEG00000015567RBFOX39880.811ENSPREG00000012886rbfox3b9980.000Poecilia_reticulata
ENSCSEG00000015567RBFOX39764.080ENSPPYG00000008704RBFOX39964.146Pongo_abelii
ENSCSEG00000015567RBFOX38062.717ENSPCAG00000001401RBFOX38487.500Procavia_capensis
ENSCSEG00000015567RBFOX37693.103ENSPCOG00000012689RBFOX38089.583Propithecus_coquereli
ENSCSEG00000015567RBFOX37186.207ENSPVAG00000015243RBFOX38483.673Pteropus_vampyrus
ENSCSEG00000015567RBFOX39988.022ENSPNYG00000009079-9888.022Pundamilia_nyererei
ENSCSEG00000015567RBFOX39877.183ENSPNYG00000010414rbfox3b9976.901Pundamilia_nyererei
ENSCSEG00000015567RBFOX38569.231ENSPNAG00000018173rbfox3b9169.231Pygocentrus_nattereri
ENSCSEG00000015567RBFOX39784.054ENSPNAG00000002889rbfox3a10083.065Pygocentrus_nattereri
ENSCSEG00000015567RBFOX37187.097ENSRNOG00000003386Rbfox310078.549Rattus_norvegicus
ENSCSEG00000015567RBFOX39576.731ENSRBIG00000040449RBFOX310077.624Rhinopithecus_bieti
ENSCSEG00000015567RBFOX38075.667ENSRROG00000000766RBFOX310077.848Rhinopithecus_roxellana
ENSCSEG00000015567RBFOX37293.103ENSSBOG00000031591RBFOX310076.582Saimiri_boliviensis_boliviensis
ENSCSEG00000015567RBFOX39667.662ENSSHAG00000016076RBFOX310067.937Sarcophilus_harrisii
ENSCSEG00000015567RBFOX39884.636ENSSFOG00015023260rbfox3a9885.286Scleropages_formosus
ENSCSEG00000015567RBFOX39566.482ENSSFOG00015004716RBFOX310067.218Scleropages_formosus
ENSCSEG00000015567RBFOX39789.918ENSSMAG00000019052-10089.918Scophthalmus_maximus
ENSCSEG00000015567RBFOX39876.031ENSSMAG00000012618rbfox3b8776.364Scophthalmus_maximus
ENSCSEG00000015567RBFOX39994.708ENSSDUG00000015801-9994.708Seriola_dumerili
ENSCSEG00000015567RBFOX38472.293ENSSDUG00000023183rbfox3b10071.338Seriola_dumerili
ENSCSEG00000015567RBFOX39998.050ENSSLDG00000016098-9998.050Seriola_lalandi_dorsalis
ENSCSEG00000015567RBFOX39781.471ENSSLDG00000000149rbfox3b10080.654Seriola_lalandi_dorsalis
ENSCSEG00000015567RBFOX39569.832ENSSPUG00000011733RBFOX39979.811Sphenodon_punctatus
ENSCSEG00000015567RBFOX39880.563ENSSPAG00000017571rbfox3b9979.718Stegastes_partitus
ENSCSEG00000015567RBFOX37280.370ENSSPAG00000004898-8180.370Stegastes_partitus
ENSCSEG00000015567RBFOX37380.072ENSSSCG00000039498RBFOX37890.000Sus_scrofa
ENSCSEG00000015567RBFOX39971.788ENSTRUG00000004894rbfox3b9575.516Takifugu_rubripes
ENSCSEG00000015567RBFOX39669.598ENSTNIG00000011278rbfox3b9968.844Tetraodon_nigroviridis
ENSCSEG00000015567RBFOX36472.368ENSTTRG00000003676RBFOX38489.583Tursiops_truncatus
ENSCSEG00000015567RBFOX38076.667ENSUAMG00000004668RBFOX310078.797Ursus_americanus
ENSCSEG00000015567RBFOX39577.624ENSVVUG00000017864RBFOX310078.165Vulpes_vulpes
ENSCSEG00000015567RBFOX39857.143ENSXETG00000020236rbfox39860.154Xenopus_tropicalis
ENSCSEG00000015567RBFOX39680.663ENSXCOG00000018262rbfox3b10083.946Xiphophorus_couchianus
ENSCSEG00000015567RBFOX39881.132ENSXMAG00000012939rbfox3b9979.891Xiphophorus_maculatus

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