EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000015585 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 15324 bases
Position: chr9:18483738-18499061
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000024408	zf-C2H2	PF00096.26	5e-29	1	5
ENSCSEP00000024408	zf-C2H2	PF00096.26	5e-29	2	5
ENSCSEP00000024408	zf-C2H2	PF00096.26	5e-29	3	5
ENSCSEP00000024408	zf-C2H2	PF00096.26	5e-29	4	5
ENSCSEP00000024408	zf-C2H2	PF00096.26	5e-29	5	5
ENSCSEP00000024408	zf-met	PF12874.7	9.1e-19	1	4
ENSCSEP00000024408	zf-met	PF12874.7	9.1e-19	2	4
ENSCSEP00000024408	zf-met	PF12874.7	9.1e-19	3	4
ENSCSEP00000024408	zf-met	PF12874.7	9.1e-19	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000024738	-	759	-	ENSCSEP00000024408	252 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000015585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000015585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000015585	-	75	40.800	ENSCSEG00000010423	-	57	40.800
ENSCSEG00000015585	-	80	43.575	ENSCSEG00000008502	-	76	43.575
ENSCSEG00000015585	-	92	33.962	ENSCSEG00000004265	-	68	33.962
ENSCSEG00000015585	-	82	36.527	ENSCSEG00000008903	-	78	35.036
ENSCSEG00000015585	-	72	36.559	ENSCSEG00000018571	-	53	36.559
ENSCSEG00000015585	-	77	35.252	ENSCSEG00000010311	snai2	51	35.252
ENSCSEG00000015585	-	60	44.595	ENSCSEG00000021317	-	61	44.595
ENSCSEG00000015585	-	91	37.736	ENSCSEG00000001315	gfi1b	55	37.736
ENSCSEG00000015585	-	77	43.972	ENSCSEG00000005491	-	77	43.972
ENSCSEG00000015585	-	93	39.181	ENSCSEG00000004210	-	99	39.181
ENSCSEG00000015585	-	94	39.326	ENSCSEG00000013398	-	87	39.326
ENSCSEG00000015585	-	75	36.527	ENSCSEG00000017606	zbtb47b	69	36.527
ENSCSEG00000015585	-	88	41.143	ENSCSEG00000020696	-	94	40.909
ENSCSEG00000015585	-	73	40.741	ENSCSEG00000009915	-	58	40.741
ENSCSEG00000015585	-	61	40.625	ENSCSEG00000010614	-	80	40.625
ENSCSEG00000015585	-	99	38.596	ENSCSEG00000001748	-	97	42.188
ENSCSEG00000015585	-	81	37.267	ENSCSEG00000005974	-	90	37.654
ENSCSEG00000015585	-	91	41.558	ENSCSEG00000019029	-	98	38.462
ENSCSEG00000015585	-	82	37.719	ENSCSEG00000019979	prdm5	72	37.719
ENSCSEG00000015585	-	71	40.816	ENSCSEG00000008539	-	55	40.909
ENSCSEG00000015585	-	71	48.684	ENSCSEG00000001168	-	76	48.684
ENSCSEG00000015585	-	93	40.541	ENSCSEG00000004273	-	72	40.541
ENSCSEG00000015585	-	69	38.961	ENSCSEG00000010453	-	53	38.961
ENSCSEG00000015585	-	64	37.975	ENSCSEG00000019599	-	62	37.975
ENSCSEG00000015585	-	74	45.902	ENSCSEG00000018815	-	83	45.902
ENSCSEG00000015585	-	72	31.138	ENSCSEG00000003536	znf341	51	31.138
ENSCSEG00000015585	-	76	37.297	ENSCSEG00000014637	-	84	37.297
ENSCSEG00000015585	-	82	40.351	ENSCSEG00000018535	-	93	38.750
ENSCSEG00000015585	-	76	43.210	ENSCSEG00000007055	-	97	43.210
ENSCSEG00000015585	-	77	39.286	ENSCSEG00000018822	-	90	39.286
ENSCSEG00000015585	-	68	36.145	ENSCSEG00000008596	scrt1b	51	36.145
ENSCSEG00000015585	-	81	37.143	ENSCSEG00000018829	-	66	37.143
ENSCSEG00000015585	-	88	39.645	ENSCSEG00000008510	-	60	42.105
ENSCSEG00000015585	-	91	42.353	ENSCSEG00000004721	-	66	42.353
ENSCSEG00000015585	-	85	33.728	ENSCSEG00000001385	patz1	51	33.728
ENSCSEG00000015585	-	91	37.500	ENSCSEG00000003757	-	98	40.323
ENSCSEG00000015585	-	87	37.975	ENSCSEG00000005983	-	94	37.975
ENSCSEG00000015585	-	69	36.975	ENSCSEG00000021022	-	57	36.975
ENSCSEG00000015585	-	70	36.986	ENSCSEG00000010264	-	62	36.986
ENSCSEG00000015585	-	79	36.723	ENSCSEG00000005935	ZNF319	82	36.723
ENSCSEG00000015585	-	71	45.902	ENSCSEG00000019047	-	94	48.684
ENSCSEG00000015585	-	94	38.158	ENSCSEG00000011586	znf236	70	34.884
ENSCSEG00000015585	-	88	39.394	ENSCSEG00000020730	-	90	40.411
ENSCSEG00000015585	-	71	45.000	ENSCSEG00000015593	-	80	45.000
ENSCSEG00000015585	-	80	37.288	ENSCSEG00000013879	znf319b	77	37.629
ENSCSEG00000015585	-	77	41.765	ENSCSEG00000001771	-	59	41.765
ENSCSEG00000015585	-	74	41.538	ENSCSEG00000000356	znf648	99	40.816
ENSCSEG00000015585	-	75	39.877	ENSCSEG00000019848	-	61	39.877
ENSCSEG00000015585	-	92	40.217	ENSCSEG00000004348	-	82	40.217

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000015585	-	73	39.286	ENSACIG00000000360	si:ch211-241b2.1	89	39.286	Amphilophus_citrinellus
ENSCSEG00000015585	-	75	39.752	ENSACIG00000007882	-	73	39.752	Amphilophus_citrinellus
ENSCSEG00000015585	-	72	40.000	ENSACIG00000008886	znf1164	80	40.000	Amphilophus_citrinellus
ENSCSEG00000015585	-	84	36.257	ENSATEG00000008683	si:ch211-241b2.1	75	36.257	Anabas_testudineus
ENSCSEG00000015585	-	77	34.146	ENSACLG00000000521	-	91	34.146	Astatotilapia_calliptera
ENSCSEG00000015585	-	76	32.934	ENSACLG00000017449	-	59	32.934	Astatotilapia_calliptera
ENSCSEG00000015585	-	88	39.869	ENSACLG00000024670	-	72	39.869	Astatotilapia_calliptera
ENSCSEG00000015585	-	79	40.984	ENSAMXG00000041650	-	87	40.984	Astyanax_mexicanus
ENSCSEG00000015585	-	71	46.032	ENSAMXG00000043291	-	66	46.032	Astyanax_mexicanus
ENSCSEG00000015585	-	80	42.697	ENSDARG00000088507	znf982	89	42.697	Danio_rerio
ENSCSEG00000015585	-	91	42.169	ENSDARG00000105056	znf45l	89	42.169	Danio_rerio
ENSCSEG00000015585	-	77	41.451	ENSDARG00000103827	znf1144	95	47.222	Danio_rerio
ENSCSEG00000015585	-	70	45.312	ENSDARG00000108441	CU570894.1	90	41.089	Danio_rerio
ENSCSEG00000015585	-	79	41.304	ENSDARG00000112141	znf1169	74	41.304	Danio_rerio
ENSCSEG00000015585	-	83	42.308	ENSDARG00000094736	znf1157	88	40.000	Danio_rerio
ENSCSEG00000015585	-	78	49.333	ENSDARG00000099618	si:dkey-1b17.6	87	49.333	Danio_rerio
ENSCSEG00000015585	-	82	47.619	ENSDARG00000053165	zgc:113377	80	47.619	Danio_rerio
ENSCSEG00000015585	-	75	43.275	ENSDARG00000101694	znf1184	99	43.275	Danio_rerio
ENSCSEG00000015585	-	85	43.169	ENSDARG00000098661	AL935300.3	77	43.169	Danio_rerio
ENSCSEG00000015585	-	75	42.045	ENSDARG00000109703	FO834825.1	82	42.045	Danio_rerio
ENSCSEG00000015585	-	81	42.690	ENSDARG00000092605	znf1003	88	42.690	Danio_rerio
ENSCSEG00000015585	-	71	40.476	ENSDARG00000078814	si:dkey-34m19.3	76	40.000	Danio_rerio
ENSCSEG00000015585	-	82	42.500	ENSDARG00000113011	zgc:113102	96	40.351	Danio_rerio
ENSCSEG00000015585	-	92	37.500	ENSDARG00000099890	CU207221.2	99	38.202	Danio_rerio
ENSCSEG00000015585	-	83	40.000	ENSEBUG00000015073	-	74	37.853	Eptatretus_burgeri
ENSCSEG00000015585	-	76	39.779	ENSFHEG00000013152	-	62	39.779	Fundulus_heteroclitus
ENSCSEG00000015585	-	98	39.506	ENSFHEG00000018209	-	77	39.506	Fundulus_heteroclitus
ENSCSEG00000015585	-	86	41.071	ENSFHEG00000018009	-	53	41.071	Fundulus_heteroclitus
ENSCSEG00000015585	-	81	38.596	ENSHBUG00000009953	-	66	38.596	Haplochromis_burtoni
ENSCSEG00000015585	-	91	38.889	ENSHBUG00000018916	-	85	36.111	Haplochromis_burtoni
ENSCSEG00000015585	-	76	38.571	ENSKMAG00000009563	-	79	38.571	Kryptolebias_marmoratus
ENSCSEG00000015585	-	82	42.466	ENSKMAG00000014629	-	60	42.466	Kryptolebias_marmoratus
ENSCSEG00000015585	-	71	36.842	ENSLBEG00000028628	znf1174	59	40.244	Labrus_bergylta
ENSCSEG00000015585	-	76	31.707	ENSMAMG00000014743	-	50	40.559	Mastacembelus_armatus
ENSCSEG00000015585	-	75	32.500	ENSMZEG00005022161	-	88	34.444	Maylandia_zebra
ENSCSEG00000015585	-	94	36.216	ENSMZEG00005027793	-	96	36.216	Maylandia_zebra
ENSCSEG00000015585	-	74	37.805	ENSMZEG00005005162	-	70	37.805	Maylandia_zebra
ENSCSEG00000015585	-	75	35.000	ENSMZEG00005025568	-	78	35.000	Maylandia_zebra
ENSCSEG00000015585	-	94	38.202	ENSMZEG00005026470	-	79	38.202	Maylandia_zebra
ENSCSEG00000015585	-	87	37.079	ENSMZEG00005007426	-	86	37.079	Maylandia_zebra
ENSCSEG00000015585	-	74	36.257	ENSMZEG00005025729	-	91	36.257	Maylandia_zebra
ENSCSEG00000015585	-	92	37.097	ENSMZEG00005027943	-	94	37.984	Maylandia_zebra
ENSCSEG00000015585	-	75	37.692	ENSMZEG00005021426	-	79	37.692	Maylandia_zebra
ENSCSEG00000015585	-	86	39.744	ENSMALG00000008638	-	72	39.744	Monopterus_albus
ENSCSEG00000015585	-	92	38.764	ENSMALG00000018074	-	68	38.764	Monopterus_albus
ENSCSEG00000015585	-	85	41.304	ENSNBRG00000000577	-	75	41.304	Neolamprologus_brichardi
ENSCSEG00000015585	-	76	34.810	ENSONIG00000006585	-	95	34.810	Oreochromis_niloticus
ENSCSEG00000015585	-	75	38.554	ENSONIG00000003363	-	99	38.554	Oreochromis_niloticus
ENSCSEG00000015585	-	92	39.456	ENSONIG00000013908	-	100	39.456	Oreochromis_niloticus
ENSCSEG00000015585	-	68	37.857	ENSORLG00020019341	-	74	54.054	Oryzias_latipes_hni
ENSCSEG00000015585	-	69	40.000	ENSPMGG00000001558	znf1174	53	40.000	Periophthalmus_magnuspinnatus
ENSCSEG00000015585	-	75	69.000	ENSPFOG00000011766	-	98	69.000	Poecilia_formosa
ENSCSEG00000015585	-	77	45.614	ENSPFOG00000001144	-	100	42.373	Poecilia_formosa
ENSCSEG00000015585	-	77	41.667	ENSPLAG00000016561	zgc:113348	100	39.888	Poecilia_latipinna
ENSCSEG00000015585	-	88	38.725	ENSPMEG00000007573	zgc:113343	60	38.725	Poecilia_mexicana
ENSCSEG00000015585	-	81	36.932	ENSPREG00000014105	-	81	41.964	Poecilia_reticulata
ENSCSEG00000015585	-	88	38.725	ENSPREG00000001514	zgc:113343	60	38.725	Poecilia_reticulata
ENSCSEG00000015585	-	70	45.679	ENSPREG00000005538	-	73	45.679	Poecilia_reticulata
ENSCSEG00000015585	-	76	33.728	ENSPNYG00000024183	zgc:173577	96	33.728	Pundamilia_nyererei
ENSCSEG00000015585	-	69	44.444	ENSSDUG00000008682	-	76	44.444	Seriola_dumerili
ENSCSEG00000015585	-	65	34.104	ENSSPAG00000009426	-	69	34.104	Stegastes_partitus
ENSCSEG00000015585	-	88	37.190	ENSSPAG00000013109	si:ch211-241b2.1	68	40.625	Stegastes_partitus
ENSCSEG00000015585	-	78	39.362	ENSSPAG00000006539	-	93	39.362	Stegastes_partitus
ENSCSEG00000015585	-	71	50.000	ENSTNIG00000000277	-	93	50.000	Tetraodon_nigroviridis
ENSCSEG00000015585	-	68	42.857	ENSXCOG00000017871	zgc:113343	63	42.857	Xiphophorus_couchianus
ENSCSEG00000015585	-	70	42.857	ENSXMAG00000019923	zgc:113343	61	42.857	Xiphophorus_maculatus